RNA–Protein interactions for RNA: ENST00000461739.1

ARHGAP4-215, Transcript of Rho GTPase activating protein 4, human

TSL 3

Gene ARHGAP4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-215	ENST00000461739	PLEKHG2	Q9H7P9	1386 aa		28.1	■■■□□ 2.09
ARHGAP4-215	ENST00000461739	BCL9	O00512	1426 aa		28.09	■■■□□ 2.09
ARHGAP4-215	ENST00000461739	SBF2	Q86WG5	1849 aa		28.09	■■■□□ 2.09
ARHGAP4-215	ENST00000461739	CFAP53	Q96M91	514 aa		28.09	■■■□□ 2.09
ARHGAP4-215	ENST00000461739	ZCRB1	Q8TBF4	217 aa	Known RBP	28.08	■■■□□ 2.09
ARHGAP4-215	ENST00000461739	KDR	P35968	1356 aa		28.06	■■■□□ 2.08
ARHGAP4-215	ENST00000461739	TNS1	Q9HBL0	1735 aa	Known RBP	28.04	■■■□□ 2.08
ARHGAP4-215	ENST00000461739	SULT6B1	Q6IMI4	303 aa		28.02	■■■□□ 2.08
ARHGAP4-215	ENST00000461739	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
ARHGAP4-215	ENST00000461739	DDX54	Q8TDD1	881 aa	Known RBP	28.01	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	PCDH11X	Q9BZA7	1347 aa		28	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	PCDH11Y	Q9BZA8	1340 aa		28	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	AEBP1	Q8IUX7	1158 aa		28	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	PRKRIP1	Q9H875	184 aa	Predicted RBP	28	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	SPG7	Q9UQ90	795 aa		28	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	SF3B2	Q13435	895 aa	Known RBP	27.99	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	TRIM37	O94972	964 aa		27.98	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	NHS	Q6T4R5	1651 aa		27.97	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	NUDC	Q9Y266	331 aa		27.97	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	U2SURP	O15042	1029 aa	Known RBP	27.96	■■■□□ 2.07
ARHGAP4-215	ENST00000461739	CYP27B1	O15528	508 aa		27.94	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	HMOX1	P09601	288 aa		27.94	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	AMOT	Q4VCS5	1084 aa		27.94	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	DOT1L	Q8TEK3	1739 aa		27.94	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	KAT6B	Q8WYB5	2073 aa		27.93	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.93	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.93	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	BAG6	P46379	1132 aa		27.91	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	IFNL2	Q8IZJ0	200 aa		27.9	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.89	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	RGPD4	Q7Z3J3	1758 aa		27.89	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	NKX1-1	Q15270	411 aa	Predicted RBP	27.89	■■■□□ 2.06
ARHGAP4-215	ENST00000461739	PHKG2	P15735	406 aa		27.88	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	ACSBG1	Q96GR2	724 aa		27.88	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	TOGARAM1	Q9Y4F4	1720 aa		27.87	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	APBA3	O96018	575 aa		27.87	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.87	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.87	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	BTAF1	O14981	1849 aa		27.87	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	KCNQ2	O43526	872 aa		27.86	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	DEFB132	Q7Z7B7	95 aa		27.86	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.85	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	PTF1A	Q7RTS3	328 aa		27.85	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	ITGB4	P16144	1822 aa		27.85	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	ANP32C	O43423	234 aa		27.84	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	FCHSD2	O94868	740 aa		27.84	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	RSPH6A	Q9H0K4	717 aa		27.84	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	HSP90AB1	P08238	724 aa	Known RBP	27.83	■■■□□ 2.05
ARHGAP4-215	ENST00000461739	PLSCR1	O15162	318 aa		27.82	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	PRIM1	P49642	420 aa	Known RBP	27.82	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	EN1	Q05925	392 aa	Predicted RBP	27.82	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	C1orf141	Q5JVX7	400 aa		27.81	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	RREB1	Q92766	1687 aa		27.81	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	PRKAR2B	P31323	418 aa		27.8	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	CAMKK2	Q96RR4	588 aa		27.8	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	VIRMA	Q69YN4	1812 aa	Known RBP	27.79	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	MTHFSD	Q2M296	383 aa	Known RBP	27.79	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	SYTL4	Q96C24	671 aa	Predicted RBP	27.79	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	SCN11A	Q9UI33	1791 aa		27.78	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	AKAP4	Q5JQC9	854 aa		27.78	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	DCAF5	Q96JK2	942 aa		27.78	■■■□□ 2.04
ARHGAP4-215	ENST00000461739	EZH2	Q15910	746 aa	Known RBP	27.76	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	GAS2L2	Q8NHY3	880 aa		27.76	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	KDM6A	O15550	1401 aa	Predicted RBP	27.75	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	ADAMTS7	Q9UKP4	1686 aa		27.75	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	PNN	Q9H307	717 aa	Known RBP	27.75	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	PHACTR3	Q96KR7	559 aa		27.74	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	NUP188	Q5SRE5	1749 aa		27.73	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	ERVV-2	B6SEH9	535 aa		27.73	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	LY75	O60449	1722 aa		27.72	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	MPRIP	Q6WCQ1	1025 aa		27.72	■■■□□ 2.03
ARHGAP4-215	ENST00000461739	NEFM	P07197	916 aa		27.7	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	WDR43	Q15061	677 aa	Known RBP eCLIP	27.7	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	PLEKHF1	Q96S99	279 aa		27.7	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	TMOD3	Q9NYL9	352 aa		27.7	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	MAP3K5	Q99683	1374 aa		27.7	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	PIGB	Q92521	554 aa		27.69	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	GNAT3	A8MTJ3	354 aa		27.67	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	TXNRD1	Q16881	649 aa		27.67	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	PROM2	Q8N271	834 aa		27.67	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	MRC1	P22897	1456 aa		27.67	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	DLG5	Q8TDM6	1919 aa		27.67	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	RNMT	O43148	476 aa	Known RBP	27.66	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	CABP4	P57796	275 aa		27.65	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	SMARCC1	Q92922	1105 aa	Predicted RBP	27.65	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	MAPK8IP3	Q9UPT6	1336 aa		27.65	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	CCDC184	Q52MB2	194 aa		27.64	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	LGR6	Q9HBX8	967 aa		27.64	■■■□□ 2.02
ARHGAP4-215	ENST00000461739	ADAMTS8	Q9UP79	889 aa		27.63	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	PALLD	Q8WX93	1383 aa		27.62	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	SLC27A3	Q5K4L6	730 aa		27.62	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	SIPA1L3	O60292	1781 aa	Predicted RBP	27.61	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	HTATSF1	O43719	755 aa	Known RBP	27.61	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	NFATC2IP	Q8NCF5	419 aa		27.61	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	SLC52A2	Q9HAB3	445 aa		27.61	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	MRS2	Q9HD23	443 aa		27.61	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	IL17RE	Q8NFR9	667 aa		27.6	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	CEMIP	Q8WUJ3	1361 aa		27.6	■■■□□ 2.01
ARHGAP4-215	ENST00000461739	PAPPA	Q13219	1627 aa		27.59	■■■□□ 2.01

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