RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 CFAP53Q96M91 514 aa9.45□□□□□ -0.9
NPHP1-209ENST00000461707 SALL3Q9BXA9 1300 aa9.45□□□□□ -0.9
NPHP1-209ENST00000461707 KIF16BQ96L93 1317 aa9.44□□□□□ -0.9
NPHP1-209ENST00000461707 NWD2Q9ULI1 1742 aa9.44□□□□□ -0.9
NPHP1-209ENST00000461707 RRS1Q15050 365 aaKnown RBP9.44□□□□□ -0.9
NPHP1-209ENST00000461707 IGSF1Q8N6C5 1336 aa9.44□□□□□ -0.9
NPHP1-209ENST00000461707 HDAC1Q13547 482 aaPredicted RBP9.44□□□□□ -0.9
NPHP1-209ENST00000461707 SSH1Q8WYL5 1049 aa9.44□□□□□ -0.9
NPHP1-209ENST00000461707 RIPK4P57078 832 aa9.43□□□□□ -0.9
NPHP1-209ENST00000461707 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.43□□□□□ -0.9
NPHP1-209ENST00000461707 TERF2IPQ9NYB0 399 aa9.43□□□□□ -0.9
NPHP1-209ENST00000461707 COL24A1Q17RW2 1714 aa9.43□□□□□ -0.9
NPHP1-209ENST00000461707 SBNO1A3KN83 1393 aa9.42□□□□□ -0.9
NPHP1-209ENST00000461707 PRKAR2BP31323 418 aa9.42□□□□□ -0.9
NPHP1-209ENST00000461707 DEKP35659 375 aaKnown RBP9.42□□□□□ -0.9
NPHP1-209ENST00000461707 DIAPH1O60610 1272 aaKnown RBP9.42□□□□□ -0.9
NPHP1-209ENST00000461707 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
NPHP1-209ENST00000461707 ANTXR1Q9H6X2 564 aa9.42□□□□□ -0.9
NPHP1-209ENST00000461707 FAM83GA6ND36 823 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 TRIM27P14373 513 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 ARHGAP45Q92619 1136 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-209ENST00000461707 TSPYL6Q8N831 410 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 ZNF428Q96B54 188 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 DLEC1Q9Y238 1755 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 TTC21AQ8NDW8 1320 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 FCHSD2O94868 740 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 DCTN1Q14203 1278 aa9.41□□□□□ -0.9
NPHP1-209ENST00000461707 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
NPHP1-209ENST00000461707 HDGFL2Q7Z4V5 671 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-209ENST00000461707 MYH3P11055 1940 aa9.4□□□□□ -0.9
NPHP1-209ENST00000461707 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-209ENST00000461707 NUDT16Q96DE0 195 aaKnown RBP9.4□□□□□ -0.91
NPHP1-209ENST00000461707 SLC26A8Q96RN1 970 aa9.4□□□□□ -0.91
NPHP1-209ENST00000461707 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.91
NPHP1-209ENST00000461707 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
NPHP1-209ENST00000461707 ZBTB40Q9NUA8 1239 aa9.39□□□□□ -0.91
NPHP1-209ENST00000461707 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
NPHP1-209ENST00000461707 SOX12O15370 315 aa9.39□□□□□ -0.91
NPHP1-209ENST00000461707 MYH7P12883 1935 aa9.39□□□□□ -0.91
NPHP1-209ENST00000461707 AEBP1Q8IUX7 1158 aa9.39□□□□□ -0.91
NPHP1-209ENST00000461707 LTBP4Q8N2S1 1624 aa9.38□□□□□ -0.91
NPHP1-209ENST00000461707 COL15A1P39059 1388 aa9.38□□□□□ -0.91
NPHP1-209ENST00000461707 MVPQ14764 893 aaKnown RBP9.38□□□□□ -0.91
NPHP1-209ENST00000461707 TMEM57Q8N5G2 664 aa9.38□□□□□ -0.91
NPHP1-209ENST00000461707 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
NPHP1-209ENST00000461707 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
NPHP1-209ENST00000461707 MAPK8IP3Q9UPT6 1336 aa9.38□□□□□ -0.91
NPHP1-209ENST00000461707 COL14A1Q05707 1796 aaKnown RBP9.37□□□□□ -0.91
NPHP1-209ENST00000461707 LY75O60449 1722 aa9.37□□□□□ -0.91
NPHP1-209ENST00000461707 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
NPHP1-209ENST00000461707 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
NPHP1-209ENST00000461707 ZKSCAN2Q63HK3 967 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 NEFMP07197 916 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 ITPRIPQ8IWB1 547 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 KIF2CQ99661 725 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
NPHP1-209ENST00000461707 SOS1Q07889 1333 aaPredicted RBP9.36□□□□□ -0.91
NPHP1-209ENST00000461707 NPHP4O75161 1426 aaPredicted RBP9.36□□□□□ -0.91
NPHP1-209ENST00000461707 JCADQ9P266 1359 aa9.35□□□□□ -0.91
NPHP1-209ENST00000461707 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
NPHP1-209ENST00000461707 TAF1LQ8IZX4 1826 aa9.35□□□□□ -0.91
NPHP1-209ENST00000461707 MRPL50Q8N5N7 158 aaKnown RBP9.35□□□□□ -0.91
NPHP1-209ENST00000461707 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
NPHP1-209ENST00000461707 VAMP4O75379 141 aa9.35□□□□□ -0.91
NPHP1-209ENST00000461707 ATF7IPQ6VMQ6 1270 aa9.35□□□□□ -0.91
NPHP1-209ENST00000461707 FTSJ3Q8IY81 847 aaKnown RBP9.35□□□□□ -0.91
NPHP1-209ENST00000461707 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
NPHP1-209ENST00000461707 SCN7AQ01118 1682 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 IFT57Q9NWB7 429 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 THSD7AQ9UPZ6 1657 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 CCDC61Q9Y6R9 512 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 C4AP0C0L4 1744 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 C4BP0C0L5 1744 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 CHL1O00533 1208 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.91
NPHP1-209ENST00000461707 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
NPHP1-209ENST00000461707 NHSQ6T4R5 1651 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 ZBTB7BO15156 539 aaPredicted RBP9.33□□□□□ -0.92
NPHP1-209ENST00000461707 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 SLIT2O94813 1529 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 ACEP12821 1306 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 NFE2L2Q16236 605 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 FLT4P35916 1363 aa9.33□□□□□ -0.92
NPHP1-209ENST00000461707 FOXO3O43524 673 aa9.32□□□□□ -0.92
NPHP1-209ENST00000461707 MIS18AQ9NYP9 233 aa9.32□□□□□ -0.92
NPHP1-209ENST00000461707 LTBP1Q14766 1721 aa9.32□□□□□ -0.92
NPHP1-209ENST00000461707 CLEC17AQ6ZS10 378 aa9.32□□□□□ -0.92
NPHP1-209ENST00000461707 CPDO75976 1380 aa9.32□□□□□ -0.92
NPHP1-209ENST00000461707 EIF4A2Q14240 407 aaKnown RBP9.32□□□□□ -0.92
NPHP1-209ENST00000461707 MCM10Q7L590 875 aa9.32□□□□□ -0.92
NPHP1-209ENST00000461707 DDX60LQ5H9U9 1706 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms