RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 PROM2Q8N271 834 aa13.79□□□□□ -0.2
SYN3-206ENST00000461446 KAT6BQ8WYB5 2073 aa13.79□□□□□ -0.2
SYN3-206ENST00000461446 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
SYN3-206ENST00000461446 PLSCR1O15162 318 aa13.78□□□□□ -0.2
SYN3-206ENST00000461446 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
SYN3-206ENST00000461446 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
SYN3-206ENST00000461446 KIF24Q5T7B8 1368 aa13.78□□□□□ -0.2
SYN3-206ENST00000461446 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
SYN3-206ENST00000461446 RREB1Q92766 1687 aa13.78□□□□□ -0.2
SYN3-206ENST00000461446 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
SYN3-206ENST00000461446 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.21
SYN3-206ENST00000461446 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
SYN3-206ENST00000461446 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
SYN3-206ENST00000461446 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
SYN3-206ENST00000461446 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
SYN3-206ENST00000461446 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
SYN3-206ENST00000461446 TXNRD1Q16881 649 aa13.74□□□□□ -0.21
SYN3-206ENST00000461446 EYA1Q99502 592 aa13.74□□□□□ -0.21
SYN3-206ENST00000461446 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
SYN3-206ENST00000461446 SHANK3Q9BYB0 1731 aa13.73□□□□□ -0.21
SYN3-206ENST00000461446 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
SYN3-206ENST00000461446 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
SYN3-206ENST00000461446 RALBP1Q15311 655 aa13.72□□□□□ -0.21
SYN3-206ENST00000461446 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
SYN3-206ENST00000461446 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
SYN3-206ENST00000461446 BTAF1O14981 1849 aa13.71□□□□□ -0.21
SYN3-206ENST00000461446 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
SYN3-206ENST00000461446 MTHFSP49914 203 aa13.71□□□□□ -0.21
SYN3-206ENST00000461446 CYP27B1O15528 508 aa13.7□□□□□ -0.22
SYN3-206ENST00000461446 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
SYN3-206ENST00000461446 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
SYN3-206ENST00000461446 KCNQ4P56696 695 aa13.69□□□□□ -0.22
SYN3-206ENST00000461446 PRKRIP1Q9H875 184 aaPredicted RBP13.69□□□□□ -0.22
SYN3-206ENST00000461446 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
SYN3-206ENST00000461446 DOT1LQ8TEK3 1739 aa13.69□□□□□ -0.22
SYN3-206ENST00000461446 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
SYN3-206ENST00000461446 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
SYN3-206ENST00000461446 LRP5O75197 1615 aa13.68□□□□□ -0.22
SYN3-206ENST00000461446 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
SYN3-206ENST00000461446 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
SYN3-206ENST00000461446 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
SYN3-206ENST00000461446 IGSF1Q8N6C5 1336 aa13.65□□□□□ -0.22
SYN3-206ENST00000461446 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
SYN3-206ENST00000461446 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.22
SYN3-206ENST00000461446 AEBP1Q8IUX7 1158 aa13.65□□□□□ -0.22
SYN3-206ENST00000461446 MYBBP1AQ9BQG0 1328 aaKnown RBP13.64□□□□□ -0.23
SYN3-206ENST00000461446 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
SYN3-206ENST00000461446 ANP32CO43423 234 aa13.64□□□□□ -0.23
SYN3-206ENST00000461446 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
SYN3-206ENST00000461446 IL13P35225 146 aa13.64□□□□□ -0.23
SYN3-206ENST00000461446 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
SYN3-206ENST00000461446 DIAPH1O60610 1272 aaKnown RBP13.63□□□□□ -0.23
SYN3-206ENST00000461446 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
SYN3-206ENST00000461446 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
SYN3-206ENST00000461446 SPON1Q9HCB6 807 aa13.63□□□□□ -0.23
SYN3-206ENST00000461446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.63□□□□□ -0.23
SYN3-206ENST00000461446 TOGARAM1Q9Y4F4 1720 aa13.62□□□□□ -0.23
SYN3-206ENST00000461446 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
SYN3-206ENST00000461446 PHKG2P15735 406 aa13.62□□□□□ -0.23
SYN3-206ENST00000461446 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
SYN3-206ENST00000461446 PIGBQ92521 554 aa13.62□□□□□ -0.23
SYN3-206ENST00000461446 CASZ1Q86V15 1759 aa13.61□□□□□ -0.23
SYN3-206ENST00000461446 IFNL2Q8IZJ0 200 aa13.61□□□□□ -0.23
SYN3-206ENST00000461446 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
SYN3-206ENST00000461446 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
SYN3-206ENST00000461446 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
SYN3-206ENST00000461446 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
SYN3-206ENST00000461446 ITGB4P16144 1822 aa13.6□□□□□ -0.23
SYN3-206ENST00000461446 LY75O60449 1722 aa13.59□□□□□ -0.23
SYN3-206ENST00000461446 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
SYN3-206ENST00000461446 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
SYN3-206ENST00000461446 PALLDQ8WX93 1383 aa13.58□□□□□ -0.23
SYN3-206ENST00000461446 HMOX1P09601 288 aa13.58□□□□□ -0.24
SYN3-206ENST00000461446 PTGER2P43116 358 aa13.58□□□□□ -0.24
SYN3-206ENST00000461446 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
SYN3-206ENST00000461446 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
SYN3-206ENST00000461446 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.24
SYN3-206ENST00000461446 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
SYN3-206ENST00000461446 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
SYN3-206ENST00000461446 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
SYN3-206ENST00000461446 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
SYN3-206ENST00000461446 KDRP35968 1356 aa13.57□□□□□ -0.24
SYN3-206ENST00000461446 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
SYN3-206ENST00000461446 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
SYN3-206ENST00000461446 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
SYN3-206ENST00000461446 PNPLA7Q6ZV29 1317 aa13.56□□□□□ -0.24
SYN3-206ENST00000461446 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
SYN3-206ENST00000461446 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
SYN3-206ENST00000461446 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
SYN3-206ENST00000461446 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
SYN3-206ENST00000461446 U2AF1L5P0DN76 240 aaPredicted RBP13.54□□□□□ -0.24
SYN3-206ENST00000461446 U2AF1Q01081 240 aaKnown RBP eCLIP13.54□□□□□ -0.24
SYN3-206ENST00000461446 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
SYN3-206ENST00000461446 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
SYN3-206ENST00000461446 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
SYN3-206ENST00000461446 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
SYN3-206ENST00000461446 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
SYN3-206ENST00000461446 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
SYN3-206ENST00000461446 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
SYN3-206ENST00000461446 SIK1P57059 783 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms