RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 NPHP3Q7Z494 1330 aa14.21□□□□□ -0.13
COPS7B-217ENST00000461350 ARHGEF25Q86VW2 580 aa14.21□□□□□ -0.13
COPS7B-217ENST00000461350 KIF24Q5T7B8 1368 aa14.21□□□□□ -0.13
COPS7B-217ENST00000461350 SLAIN2Q9P270 581 aa14.21□□□□□ -0.14
COPS7B-217ENST00000461350 KDRP35968 1356 aa14.21□□□□□ -0.14
COPS7B-217ENST00000461350 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
COPS7B-217ENST00000461350 NBPF6Q5VWK0 638 aa14.2□□□□□ -0.14
COPS7B-217ENST00000461350 PANK1Q8TE04 598 aa14.2□□□□□ -0.14
COPS7B-217ENST00000461350 NBPF4Q96M43 638 aa14.2□□□□□ -0.14
COPS7B-217ENST00000461350 USP19O94966 1318 aa14.2□□□□□ -0.14
COPS7B-217ENST00000461350 LMOD3Q0VAK6 560 aa14.2□□□□□ -0.14
COPS7B-217ENST00000461350 SLKQ9H2G2 1235 aaPredicted RBP14.2□□□□□ -0.14
COPS7B-217ENST00000461350 AXIN2Q9Y2T1 843 aa14.2□□□□□ -0.14
COPS7B-217ENST00000461350 RTL1A6NKG5 1358 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 BECN1Q14457 450 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 SLIT3O75094 1523 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 CLUAP1Q96AJ1 413 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
COPS7B-217ENST00000461350 TSPYL6Q8N831 410 aa14.18□□□□□ -0.14
COPS7B-217ENST00000461350 SSH1Q8WYL5 1049 aa14.18□□□□□ -0.14
COPS7B-217ENST00000461350 MED1Q15648 1581 aaPredicted RBP14.18□□□□□ -0.14
COPS7B-217ENST00000461350 GNAI1P63096 354 aa14.18□□□□□ -0.14
COPS7B-217ENST00000461350 SMC4Q9NTJ3 1288 aa14.18□□□□□ -0.14
COPS7B-217ENST00000461350 CALD1Q05682 793 aaKnown RBP14.17□□□□□ -0.14
COPS7B-217ENST00000461350 IFT57Q9NWB7 429 aa14.17□□□□□ -0.14
COPS7B-217ENST00000461350 SEC24BO95487 1268 aa14.17□□□□□ -0.14
COPS7B-217ENST00000461350 ZNF853P0CG23 659 aa14.17□□□□□ -0.14
COPS7B-217ENST00000461350 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
COPS7B-217ENST00000461350 PXDNQ92626 1479 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 RLBP1P12271 317 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 CFAP44Q96MT7 982 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 CHRNA2Q15822 529 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 SPATA31A3Q5VYP0 1347 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 TNS3Q68CZ2 1445 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 RGPD5Q99666 1765 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 KRT24Q2M2I5 525 aa14.16□□□□□ -0.14
COPS7B-217ENST00000461350 C8orf58Q8NAV2 365 aa14.15□□□□□ -0.14
COPS7B-217ENST00000461350 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.14
COPS7B-217ENST00000461350 GAS2L2Q8NHY3 880 aa14.14□□□□□ -0.15
COPS7B-217ENST00000461350 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
COPS7B-217ENST00000461350 CT47B1P0C2W7 299 aaPredicted RBP14.14□□□□□ -0.15
COPS7B-217ENST00000461350 PHRF1Q9P1Y6 1649 aaKnown RBP14.12□□□□□ -0.15
COPS7B-217ENST00000461350 VAMP4O75379 141 aa14.12□□□□□ -0.15
COPS7B-217ENST00000461350 NOB1Q9ULX3 412 aaKnown RBP14.12□□□□□ -0.15
COPS7B-217ENST00000461350 TWISTNBQ3B726 338 aaPredicted RBP14.12□□□□□ -0.15
COPS7B-217ENST00000461350 FAM43AQ8N2R8 423 aa14.12□□□□□ -0.15
COPS7B-217ENST00000461350 ARXQ96QS3 562 aa14.12□□□□□ -0.15
COPS7B-217ENST00000461350 GNAT3A8MTJ3 354 aa14.11□□□□□ -0.15
COPS7B-217ENST00000461350 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
COPS7B-217ENST00000461350 CRB1P82279 1406 aa14.11□□□□□ -0.15
COPS7B-217ENST00000461350 CHL1O00533 1208 aa14.11□□□□□ -0.15
COPS7B-217ENST00000461350 KIAA0232Q92628 1395 aa14.11□□□□□ -0.15
COPS7B-217ENST00000461350 ERBB3P21860 1342 aa14.1□□□□□ -0.15
COPS7B-217ENST00000461350 TRIM27P14373 513 aa14.1□□□□□ -0.15
COPS7B-217ENST00000461350 IL17REQ8NFR9 667 aa14.1□□□□□ -0.15
COPS7B-217ENST00000461350 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
COPS7B-217ENST00000461350 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
COPS7B-217ENST00000461350 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
COPS7B-217ENST00000461350 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
COPS7B-217ENST00000461350 MAP3K5Q99683 1374 aa14.09□□□□□ -0.15
COPS7B-217ENST00000461350 CSB-PGBD3P0DP91 1061 aa14.09□□□□□ -0.15
COPS7B-217ENST00000461350 HAP1P54257 671 aaPredicted RBP14.09□□□□□ -0.15
COPS7B-217ENST00000461350 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
COPS7B-217ENST00000461350 SPRYD3Q8NCJ5 442 aa14.08□□□□□ -0.16
COPS7B-217ENST00000461350 ATF7IPQ6VMQ6 1270 aa14.08□□□□□ -0.16
COPS7B-217ENST00000461350 ALDH1L2Q3SY69 923 aa14.07□□□□□ -0.16
COPS7B-217ENST00000461350 ZNF530Q6P9A1 599 aaPredicted RBP14.07□□□□□ -0.16
COPS7B-217ENST00000461350 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
COPS7B-217ENST00000461350 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
COPS7B-217ENST00000461350 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
COPS7B-217ENST00000461350 L1TD1Q5T7N2 865 aaKnown RBP14.07□□□□□ -0.16
COPS7B-217ENST00000461350 MRPL50Q8N5N7 158 aaKnown RBP14.07□□□□□ -0.16
COPS7B-217ENST00000461350 CRYBG1Q9Y4K1 1723 aa14.06□□□□□ -0.16
COPS7B-217ENST00000461350 MPRIPQ6WCQ1 1025 aa14.06□□□□□ -0.16
COPS7B-217ENST00000461350 PRDM11Q9NQV5 511 aa14.06□□□□□ -0.16
COPS7B-217ENST00000461350 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
COPS7B-217ENST00000461350 KIF16BQ96L93 1317 aa14.06□□□□□ -0.16
COPS7B-217ENST00000461350 COL18A1P39060 1754 aa14.06□□□□□ -0.16
COPS7B-217ENST00000461350 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
COPS7B-217ENST00000461350 TBC1D2Q9BYX2 928 aa14.05□□□□□ -0.16
COPS7B-217ENST00000461350 HTATSF1O43719 755 aaKnown RBP14.05□□□□□ -0.16
COPS7B-217ENST00000461350 MVPQ14764 893 aaKnown RBP14.05□□□□□ -0.16
COPS7B-217ENST00000461350 PLEKHO1Q53GL0 409 aaPredicted RBP14.05□□□□□ -0.16
COPS7B-217ENST00000461350 TMEM57Q8N5G2 664 aa14.05□□□□□ -0.16
COPS7B-217ENST00000461350 TBC1D32Q96NH3 1257 aa14.05□□□□□ -0.16
COPS7B-217ENST00000461350 ZNF428Q96B54 188 aa14.04□□□□□ -0.16
COPS7B-217ENST00000461350 RWDD1Q9H446 243 aaPredicted RBP14.04□□□□□ -0.16
COPS7B-217ENST00000461350 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
COPS7B-217ENST00000461350 IPO8O15397 1037 aaKnown RBP14.03□□□□□ -0.16
COPS7B-217ENST00000461350 GZF1Q9H116 711 aaPredicted RBP14.03□□□□□ -0.16
COPS7B-217ENST00000461350 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
COPS7B-217ENST00000461350 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
COPS7B-217ENST00000461350 NECTIN2Q92692 538 aa14.03□□□□□ -0.16
COPS7B-217ENST00000461350 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.16
COPS7B-217ENST00000461350 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms