RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 CD2APQ9Y5K6 639 aa18.28■□□□□ 0.52
C9orf78-202ENST00000461349 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
C9orf78-202ENST00000461349 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
C9orf78-202ENST00000461349 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
C9orf78-202ENST00000461349 TAF1LQ8IZX4 1826 aa18.26■□□□□ 0.51
C9orf78-202ENST00000461349 NME9Q86XW9 330 aa18.24■□□□□ 0.51
C9orf78-202ENST00000461349 USP47Q96K76 1375 aa18.24■□□□□ 0.51
C9orf78-202ENST00000461349 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
C9orf78-202ENST00000461349 NSD2O96028 1365 aa18.23■□□□□ 0.51
C9orf78-202ENST00000461349 HMGB2P26583 209 aaKnown RBP18.23■□□□□ 0.51
C9orf78-202ENST00000461349 APLP1P51693 650 aa18.22■□□□□ 0.51
C9orf78-202ENST00000461349 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
C9orf78-202ENST00000461349 LTV1Q96GA3 475 aaPredicted RBP18.21■□□□□ 0.51
C9orf78-202ENST00000461349 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
C9orf78-202ENST00000461349 SBNO2Q9Y2G9 1366 aa18.19■□□□□ 0.5
C9orf78-202ENST00000461349 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
C9orf78-202ENST00000461349 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
C9orf78-202ENST00000461349 IP6K1Q92551 441 aa18.19■□□□□ 0.5
C9orf78-202ENST00000461349 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
C9orf78-202ENST00000461349 KIF3CO14782 793 aa18.18■□□□□ 0.5
C9orf78-202ENST00000461349 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
C9orf78-202ENST00000461349 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
C9orf78-202ENST00000461349 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
C9orf78-202ENST00000461349 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
C9orf78-202ENST00000461349 C4BP0C0L5 1744 aa18.16■□□□□ 0.5
C9orf78-202ENST00000461349 WDR90Q96KV7 1748 aa18.16■□□□□ 0.5
C9orf78-202ENST00000461349 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
C9orf78-202ENST00000461349 MEGF6O75095 1541 aa18.14■□□□□ 0.49
C9orf78-202ENST00000461349 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
C9orf78-202ENST00000461349 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
C9orf78-202ENST00000461349 ITGB4P16144 1822 aa18.14■□□□□ 0.49
C9orf78-202ENST00000461349 TOGARAM1Q9Y4F4 1720 aa18.13■□□□□ 0.49
C9orf78-202ENST00000461349 TOMM70O94826 608 aa18.13■□□□□ 0.49
C9orf78-202ENST00000461349 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
C9orf78-202ENST00000461349 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
C9orf78-202ENST00000461349 AK7Q96M32 723 aa18.12■□□□□ 0.49
C9orf78-202ENST00000461349 AMPHP49418 695 aa18.11■□□□□ 0.49
C9orf78-202ENST00000461349 DNAJC5GQ8N7S2 189 aa18.11■□□□□ 0.49
C9orf78-202ENST00000461349 CGNL1Q0VF96 1302 aa18.11■□□□□ 0.49
C9orf78-202ENST00000461349 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
C9orf78-202ENST00000461349 A0A1W2PP64 1363 aa18.1■□□□□ 0.49
C9orf78-202ENST00000461349 HOXC9P31274 260 aa18.1■□□□□ 0.49
C9orf78-202ENST00000461349 RAPGEF4Q8WZA2 1011 aa18.09■□□□□ 0.49
C9orf78-202ENST00000461349 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
C9orf78-202ENST00000461349 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
C9orf78-202ENST00000461349 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
C9orf78-202ENST00000461349 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
C9orf78-202ENST00000461349 PHF14O94880 888 aa18.08■□□□□ 0.48
C9orf78-202ENST00000461349 COG3Q96JB2 828 aa18.08■□□□□ 0.48
C9orf78-202ENST00000461349 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
C9orf78-202ENST00000461349 MPRIPQ6WCQ1 1025 aa18.07■□□□□ 0.48
C9orf78-202ENST00000461349 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
C9orf78-202ENST00000461349 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
C9orf78-202ENST00000461349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
C9orf78-202ENST00000461349 SMARCC1Q92922 1105 aaPredicted RBP18.06■□□□□ 0.48
C9orf78-202ENST00000461349 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
C9orf78-202ENST00000461349 CAPN15O75808 1086 aa18.05■□□□□ 0.48
C9orf78-202ENST00000461349 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
C9orf78-202ENST00000461349 KIAA1551Q9HCM1 1747 aa18.04■□□□□ 0.48
C9orf78-202ENST00000461349 SSFA2P28290 1259 aa18.04■□□□□ 0.48
C9orf78-202ENST00000461349 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
C9orf78-202ENST00000461349 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
C9orf78-202ENST00000461349 NBPF6Q5VWK0 638 aa18.03■□□□□ 0.48
C9orf78-202ENST00000461349 USHBP1Q8N6Y0 703 aa18.03■□□□□ 0.48
C9orf78-202ENST00000461349 NBPF4Q96M43 638 aa18.03■□□□□ 0.48
C9orf78-202ENST00000461349 MAP2P11137 1827 aaKnown RBP18.02■□□□□ 0.48
C9orf78-202ENST00000461349 RBM46Q8TBY0 533 aaKnown RBP18.02■□□□□ 0.48
C9orf78-202ENST00000461349 KLRG1Q96E93 195 aa18.02■□□□□ 0.48
C9orf78-202ENST00000461349 NMRK2Q9NPI5 230 aa18.02■□□□□ 0.48
C9orf78-202ENST00000461349 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
C9orf78-202ENST00000461349 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
C9orf78-202ENST00000461349 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
C9orf78-202ENST00000461349 TNS4Q8IZW8 715 aa18.01■□□□□ 0.47
C9orf78-202ENST00000461349 BCS1LQ9Y276 419 aa18.01■□□□□ 0.47
C9orf78-202ENST00000461349 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
C9orf78-202ENST00000461349 ARFGEF1Q9Y6D6 1849 aa18■□□□□ 0.47
C9orf78-202ENST00000461349 ARHGAP27Q6ZUM4 889 aa18■□□□□ 0.47
C9orf78-202ENST00000461349 JMYQ8N9B5 988 aa18■□□□□ 0.47
C9orf78-202ENST00000461349 FBLN1P23142 703 aa17.99■□□□□ 0.47
C9orf78-202ENST00000461349 TGFB2P61812 414 aa17.99■□□□□ 0.47
C9orf78-202ENST00000461349 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
C9orf78-202ENST00000461349 PUS7Q96PZ0 661 aaKnown RBP17.99■□□□□ 0.47
C9orf78-202ENST00000461349 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
C9orf78-202ENST00000461349 PLEKHG2Q9H7P9 1386 aa17.98■□□□□ 0.47
C9orf78-202ENST00000461349 TNRC6CQ9HCJ0 1690 aaKnown RBP17.98■□□□□ 0.47
C9orf78-202ENST00000461349 GNPATO15228 680 aa17.97■□□□□ 0.47
C9orf78-202ENST00000461349 MMP10P09238 476 aa17.97■□□□□ 0.47
C9orf78-202ENST00000461349 PRELPP51888 382 aa17.97■□□□□ 0.47
C9orf78-202ENST00000461349 FSTL1Q12841 308 aa17.97■□□□□ 0.47
C9orf78-202ENST00000461349 RRS1Q15050 365 aaKnown RBP17.97■□□□□ 0.47
C9orf78-202ENST00000461349 HTRA3P83110 453 aa17.96■□□□□ 0.47
C9orf78-202ENST00000461349 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
C9orf78-202ENST00000461349 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
C9orf78-202ENST00000461349 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 CYP27B1O15528 508 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 FCHSD2O94868 740 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 SIK1P57059 783 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
C9orf78-202ENST00000461349 PIGBQ92521 554 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms