RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
SHANK1-205ENST00000461154 ZCRB1Q8TBF4 217 aaKnown RBP21.89■■□□□ 1.09
SHANK1-205ENST00000461154 CFAP53Q96M91 514 aa21.89■■□□□ 1.09
SHANK1-205ENST00000461154 DDX54Q8TDD1 881 aaKnown RBP21.88■■□□□ 1.09
SHANK1-205ENST00000461154 CAMKK2Q96RR4 588 aa21.88■■□□□ 1.09
SHANK1-205ENST00000461154 IGSF1Q8N6C5 1336 aa21.87■■□□□ 1.09
SHANK1-205ENST00000461154 MEGF6O75095 1541 aa21.87■■□□□ 1.09
SHANK1-205ENST00000461154 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
SHANK1-205ENST00000461154 EZH2Q15910 746 aaKnown RBP21.87■■□□□ 1.09
SHANK1-205ENST00000461154 TNS1Q9HBL0 1735 aaKnown RBP21.86■■□□□ 1.09
SHANK1-205ENST00000461154 IL13P35225 146 aa21.86■■□□□ 1.09
SHANK1-205ENST00000461154 PLSCR1O15162 318 aa21.84■■□□□ 1.09
SHANK1-205ENST00000461154 COL3A1P02461 1466 aaPredicted RBP21.83■■□□□ 1.09
SHANK1-205ENST00000461154 PLEKHG2Q9H7P9 1386 aa21.83■■□□□ 1.08
SHANK1-205ENST00000461154 ACSBG1Q96GR2 724 aa21.82■■□□□ 1.08
SHANK1-205ENST00000461154 KCNQ2O43526 872 aa21.81■■□□□ 1.08
SHANK1-205ENST00000461154 PTF1AQ7RTS3 328 aa21.81■■□□□ 1.08
SHANK1-205ENST00000461154 SBF2Q86WG5 1849 aa21.8■■□□□ 1.08
SHANK1-205ENST00000461154 NUDCQ9Y266 331 aa21.8■■□□□ 1.08
SHANK1-205ENST00000461154 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
SHANK1-205ENST00000461154 KDRP35968 1356 aa21.79■■□□□ 1.08
SHANK1-205ENST00000461154 SULT6B1Q6IMI4 303 aa21.79■■□□□ 1.08
SHANK1-205ENST00000461154 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
SHANK1-205ENST00000461154 SPG7Q9UQ90 795 aa21.79■■□□□ 1.08
SHANK1-205ENST00000461154 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
SHANK1-205ENST00000461154 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
SHANK1-205ENST00000461154 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
SHANK1-205ENST00000461154 SHANK3Q9BYB0 1731 aa21.78■■□□□ 1.08
SHANK1-205ENST00000461154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.78■■□□□ 1.08
SHANK1-205ENST00000461154 U2SURPO15042 1029 aaKnown RBP21.77■■□□□ 1.08
SHANK1-205ENST00000461154 NBPF14Q5TI25 921 aa21.76■■□□□ 1.07
SHANK1-205ENST00000461154 AEBP1Q8IUX7 1158 aa21.76■■□□□ 1.07
SHANK1-205ENST00000461154 HMOX1P09601 288 aa21.74■■□□□ 1.07
SHANK1-205ENST00000461154 PRIM1P49642 420 aaKnown RBP21.74■■□□□ 1.07
SHANK1-205ENST00000461154 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
SHANK1-205ENST00000461154 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
SHANK1-205ENST00000461154 NHSQ6T4R5 1651 aa21.73■■□□□ 1.07
SHANK1-205ENST00000461154 CYP27B1O15528 508 aa21.73■■□□□ 1.07
SHANK1-205ENST00000461154 SYTL4Q96C24 671 aaPredicted RBP21.73■■□□□ 1.07
SHANK1-205ENST00000461154 ANP32CO43423 234 aa21.71■■□□□ 1.07
SHANK1-205ENST00000461154 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
SHANK1-205ENST00000461154 PROM2Q8N271 834 aa21.71■■□□□ 1.07
SHANK1-205ENST00000461154 KAT6BQ8WYB5 2073 aa21.7■■□□□ 1.06
SHANK1-205ENST00000461154 RGPD3A6NKT7 1758 aaPredicted RBP21.7■■□□□ 1.06
SHANK1-205ENST00000461154 RGPD4Q7Z3J3 1758 aa21.7■■□□□ 1.06
SHANK1-205ENST00000461154 PSDA5PKW4 1024 aaPredicted RBP21.7■■□□□ 1.06
SHANK1-205ENST00000461154 U2AF1L5P0DN76 240 aaPredicted RBP21.7■■□□□ 1.06
SHANK1-205ENST00000461154 U2AF1Q01081 240 aaKnown RBP eCLIP21.7■■□□□ 1.06
SHANK1-205ENST00000461154 R3HDM1Q15032 1099 aaKnown RBP21.7■■□□□ 1.06
SHANK1-205ENST00000461154 IFNL2Q8IZJ0 200 aa21.7■■□□□ 1.06
SHANK1-205ENST00000461154 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
SHANK1-205ENST00000461154 RREB1Q92766 1687 aa21.69■■□□□ 1.06
SHANK1-205ENST00000461154 DOT1LQ8TEK3 1739 aa21.67■■□□□ 1.06
SHANK1-205ENST00000461154 PHKG2P15735 406 aa21.67■■□□□ 1.06
SHANK1-205ENST00000461154 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
SHANK1-205ENST00000461154 FCHSD2O94868 740 aa21.66■■□□□ 1.06
SHANK1-205ENST00000461154 HSP90AB1P08238 724 aaKnown RBP21.66■■□□□ 1.06
SHANK1-205ENST00000461154 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
SHANK1-205ENST00000461154 RSPH6AQ9H0K4 717 aa21.65■■□□□ 1.06
SHANK1-205ENST00000461154 NUP188Q5SRE5 1749 aa21.65■■□□□ 1.06
SHANK1-205ENST00000461154 BTAF1O14981 1849 aa21.64■■□□□ 1.05
SHANK1-205ENST00000461154 PRKAR2BP31323 418 aa21.63■■□□□ 1.05
SHANK1-205ENST00000461154 SLC27A3Q5K4L6 730 aa21.63■■□□□ 1.05
SHANK1-205ENST00000461154 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
SHANK1-205ENST00000461154 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
SHANK1-205ENST00000461154 NEFMP07197 916 aa21.62■■□□□ 1.05
SHANK1-205ENST00000461154 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
SHANK1-205ENST00000461154 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
SHANK1-205ENST00000461154 GAS2L2Q8NHY3 880 aa21.61■■□□□ 1.05
SHANK1-205ENST00000461154 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
SHANK1-205ENST00000461154 WDR43Q15061 677 aaKnown RBP eCLIP21.6■■□□□ 1.05
SHANK1-205ENST00000461154 MTHFSDQ2M296 383 aaKnown RBP21.6■■□□□ 1.05
SHANK1-205ENST00000461154 ANO8Q9HCE9 1232 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-205ENST00000461154 TOGARAM1Q9Y4F4 1720 aa21.6■■□□□ 1.05
SHANK1-205ENST00000461154 HMGB2P26583 209 aaKnown RBP21.59■■□□□ 1.05
SHANK1-205ENST00000461154 SLC15A2Q16348 729 aa21.59■■□□□ 1.05
SHANK1-205ENST00000461154 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
SHANK1-205ENST00000461154 TMOD3Q9NYL9 352 aa21.59■■□□□ 1.05
SHANK1-205ENST00000461154 PIGBQ92521 554 aa21.58■■□□□ 1.05
SHANK1-205ENST00000461154 LRRC4BQ9NT99 713 aa21.58■■□□□ 1.05
SHANK1-205ENST00000461154 ITGB4P16144 1822 aa21.57■■□□□ 1.04
SHANK1-205ENST00000461154 ERVV-2B6SEH9 535 aa21.57■■□□□ 1.04
SHANK1-205ENST00000461154 PHACTR3Q96KR7 559 aa21.56■■□□□ 1.04
SHANK1-205ENST00000461154 CCNL1Q9UK58 526 aaPredicted RBP21.56■■□□□ 1.04
SHANK1-205ENST00000461154 KDM6AO15550 1401 aaPredicted RBP21.55■■□□□ 1.04
SHANK1-205ENST00000461154 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
SHANK1-205ENST00000461154 SCN11AQ9UI33 1791 aa21.54■■□□□ 1.04
SHANK1-205ENST00000461154 PALLDQ8WX93 1383 aa21.54■■□□□ 1.04
SHANK1-205ENST00000461154 MAP3K5Q99683 1374 aa21.54■■□□□ 1.04
SHANK1-205ENST00000461154 GNAT3A8MTJ3 354 aa21.53■■□□□ 1.04
SHANK1-205ENST00000461154 KCNQ4P56696 695 aa21.52■■□□□ 1.04
SHANK1-205ENST00000461154 CABP4P57796 275 aa21.52■■□□□ 1.04
SHANK1-205ENST00000461154 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
SHANK1-205ENST00000461154 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
SHANK1-205ENST00000461154 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
SHANK1-205ENST00000461154 AKT1S1Q96B36 256 aa21.51■■□□□ 1.03
SHANK1-205ENST00000461154 ADAMTS7Q9UKP4 1686 aa21.5■■□□□ 1.03
SHANK1-205ENST00000461154 RNMTO43148 476 aaKnown RBP21.5■■□□□ 1.03
SHANK1-205ENST00000461154 ADAMTS8Q9UP79 889 aa21.5■■□□□ 1.03
SHANK1-205ENST00000461154 LY75O60449 1722 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms