RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 AKT1S1Q96B36 256 aa25.58■■□□□ 1.69
COL9A2-205ENST00000461118 ARXQ96QS3 562 aa25.58■■□□□ 1.69
COL9A2-205ENST00000461118 IP6K1Q92551 441 aa25.57■■□□□ 1.68
COL9A2-205ENST00000461118 NSD2O96028 1365 aa25.53■■□□□ 1.68
COL9A2-205ENST00000461118 FYB1O15117 783 aa25.51■■□□□ 1.67
COL9A2-205ENST00000461118 DDX54Q8TDD1 881 aaKnown RBP25.51■■□□□ 1.67
COL9A2-205ENST00000461118 COG3Q96JB2 828 aa25.51■■□□□ 1.67
COL9A2-205ENST00000461118 PNPLA7Q6ZV29 1317 aa25.51■■□□□ 1.67
COL9A2-205ENST00000461118 SLC27A3Q5K4L6 730 aa25.5■■□□□ 1.67
COL9A2-205ENST00000461118 MEGF6O75095 1541 aa25.49■■□□□ 1.67
COL9A2-205ENST00000461118 MAP3K19Q56UN5 1328 aa25.49■■□□□ 1.67
COL9A2-205ENST00000461118 FBLN1P23142 703 aa25.49■■□□□ 1.67
COL9A2-205ENST00000461118 LTV1Q96GA3 475 aaPredicted RBP25.49■■□□□ 1.67
COL9A2-205ENST00000461118 CARD14Q9BXL6 1004 aa25.49■■□□□ 1.67
COL9A2-205ENST00000461118 GOLGB1Q14789 3259 aaKnown RBP25.49■■□□□ 1.67
COL9A2-205ENST00000461118 HOXC9P31274 260 aa25.48■■□□□ 1.67
COL9A2-205ENST00000461118 KCNQ4P56696 695 aa25.48■■□□□ 1.67
COL9A2-205ENST00000461118 SLC16A10Q8TF71 515 aa25.48■■□□□ 1.67
COL9A2-205ENST00000461118 PRIM1P49642 420 aaKnown RBP25.46■■□□□ 1.67
COL9A2-205ENST00000461118 GGNBP2Q9H3C7 697 aa25.44■■□□□ 1.66
COL9A2-205ENST00000461118 TAF1LQ8IZX4 1826 aa25.44■■□□□ 1.66
COL9A2-205ENST00000461118 NSD3Q9BZ95 1437 aa25.42■■□□□ 1.66
COL9A2-205ENST00000461118 C5P01031 1676 aa25.42■■□□□ 1.66
COL9A2-205ENST00000461118 POLR3GLQ9BT43 218 aa25.41■■□□□ 1.66
COL9A2-205ENST00000461118 ZCRB1Q8TBF4 217 aaKnown RBP25.4■■□□□ 1.66
COL9A2-205ENST00000461118 SYTL4Q96C24 671 aaPredicted RBP25.4■■□□□ 1.66
COL9A2-205ENST00000461118 TFCP2L1Q9NZI6 479 aa25.4■■□□□ 1.66
COL9A2-205ENST00000461118 KIF20BQ96Q89 1820 aa25.4■■□□□ 1.66
COL9A2-205ENST00000461118 NLGN2Q8NFZ4 835 aa25.39■■□□□ 1.66
COL9A2-205ENST00000461118 RTL1A6NKG5 1358 aa25.39■■□□□ 1.65
COL9A2-205ENST00000461118 AMPHP49418 695 aa25.38■■□□□ 1.65
COL9A2-205ENST00000461118 C1QTNF8P60827 252 aa25.38■■□□□ 1.65
COL9A2-205ENST00000461118 GPR162Q16538 588 aa25.38■■□□□ 1.65
COL9A2-205ENST00000461118 NBPF6Q5VWK0 638 aa25.38■■□□□ 1.65
COL9A2-205ENST00000461118 NBPF4Q96M43 638 aa25.38■■□□□ 1.65
COL9A2-205ENST00000461118 ITGB4P16144 1822 aa25.37■■□□□ 1.65
COL9A2-205ENST00000461118 POLD1P28340 1107 aa25.37■■□□□ 1.65
COL9A2-205ENST00000461118 TOGARAM1Q9Y4F4 1720 aa25.37■■□□□ 1.65
COL9A2-205ENST00000461118 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
COL9A2-205ENST00000461118 RRS1Q15050 365 aaKnown RBP25.35■■□□□ 1.65
COL9A2-205ENST00000461118 KLHL34Q8N239 644 aa25.35■■□□□ 1.65
COL9A2-205ENST00000461118 CCNL1Q9UK58 526 aaPredicted RBP25.35■■□□□ 1.65
COL9A2-205ENST00000461118 COL23A1Q86Y22 540 aaPredicted RBP25.34■■□□□ 1.65
COL9A2-205ENST00000461118 PANK3Q9H999 370 aa25.34■■□□□ 1.65
COL9A2-205ENST00000461118 USHBP1Q8N6Y0 703 aa25.33■■□□□ 1.65
COL9A2-205ENST00000461118 PKD1L3Q7Z443 1732 aa25.32■■□□□ 1.64
COL9A2-205ENST00000461118 KIF24Q5T7B8 1368 aa25.31■■□□□ 1.64
COL9A2-205ENST00000461118 SENP3-EIF4A1A0A087X0R7 540 aa25.3■■□□□ 1.64
COL9A2-205ENST00000461118 YBX3P16989 372 aaKnown RBP eCLIP25.3■■□□□ 1.64
COL9A2-205ENST00000461118 KIF7Q2M1P5 1343 aa25.3■■□□□ 1.64
COL9A2-205ENST00000461118 UBR3Q6ZT12 1888 aa25.29■■□□□ 1.64
COL9A2-205ENST00000461118 C4BP0C0L5 1744 aa25.28■■□□□ 1.64
COL9A2-205ENST00000461118 INSRP06213 1382 aa25.28■■□□□ 1.64
COL9A2-205ENST00000461118 MAP2P11137 1827 aaKnown RBP25.28■■□□□ 1.64
COL9A2-205ENST00000461118 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
COL9A2-205ENST00000461118 HSP90AB2PQ58FF8 381 aa25.27■■□□□ 1.64
COL9A2-205ENST00000461118 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
COL9A2-205ENST00000461118 RAPGEF4Q8WZA2 1011 aa25.25■■□□□ 1.63
COL9A2-205ENST00000461118 FLT4P35916 1363 aa25.25■■□□□ 1.63
COL9A2-205ENST00000461118 SMG6Q86US8 1419 aaKnown RBP25.25■■□□□ 1.63
COL9A2-205ENST00000461118 NCAPD2Q15021 1401 aa25.23■■□□□ 1.63
COL9A2-205ENST00000461118 CYP27B1O15528 508 aa25.23■■□□□ 1.63
COL9A2-205ENST00000461118 TATP17735 454 aaPredicted RBP25.23■■□□□ 1.63
COL9A2-205ENST00000461118 MSL1Q68DK7 614 aa25.23■■□□□ 1.63
COL9A2-205ENST00000461118 PALLDQ8WX93 1383 aa25.22■■□□□ 1.63
COL9A2-205ENST00000461118 PCDH11XQ9BZA7 1347 aa25.22■■□□□ 1.63
COL9A2-205ENST00000461118 PCDH11YQ9BZA8 1340 aa25.22■■□□□ 1.63
COL9A2-205ENST00000461118 EMILIN1Q9Y6C2 1016 aa25.22■■□□□ 1.63
COL9A2-205ENST00000461118 MSH5O43196 834 aa25.21■■□□□ 1.63
COL9A2-205ENST00000461118 GIGYF1O75420 1035 aaPredicted RBP25.21■■□□□ 1.63
COL9A2-205ENST00000461118 AMIGO3Q86WK7 504 aa25.21■■□□□ 1.63
COL9A2-205ENST00000461118 KNSTRNQ9Y448 316 aa25.2■■□□□ 1.62
COL9A2-205ENST00000461118 CEP350Q5VT06 3117 aa25.19■■□□□ 1.62
COL9A2-205ENST00000461118 GRIN3BO60391 1043 aa25.19■■□□□ 1.62
COL9A2-205ENST00000461118 POLKQ9UBT6 870 aa25.19■■□□□ 1.62
COL9A2-205ENST00000461118 WASHC2AQ641Q2 1341 aa25.18■■□□□ 1.62
COL9A2-205ENST00000461118 MPRIPQ6WCQ1 1025 aa25.18■■□□□ 1.62
COL9A2-205ENST00000461118 CD2APQ9Y5K6 639 aa25.17■■□□□ 1.62
COL9A2-205ENST00000461118 PER1O15534 1290 aaPredicted RBP25.16■■□□□ 1.62
COL9A2-205ENST00000461118 AMER1Q5JTC6 1135 aaPredicted RBP25.15■■□□□ 1.62
COL9A2-205ENST00000461118 FLAD1Q8NFF5 587 aa25.15■■□□□ 1.62
COL9A2-205ENST00000461118 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.62
COL9A2-205ENST00000461118 NKX1-1Q15270 411 aaPredicted RBP25.14■■□□□ 1.62
COL9A2-205ENST00000461118 ATP10DQ9P241 1426 aa25.13■■□□□ 1.61
COL9A2-205ENST00000461118 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
COL9A2-205ENST00000461118 SMIM5Q71RC9 77 aa25.13■■□□□ 1.61
COL9A2-205ENST00000461118 MORC1Q86VD1 984 aa25.13■■□□□ 1.61
COL9A2-205ENST00000461118 PIGBQ92521 554 aa25.13■■□□□ 1.61
COL9A2-205ENST00000461118 ADCY9O60503 1353 aa25.13■■□□□ 1.61
COL9A2-205ENST00000461118 KIF13BQ9NQT8 1826 aa25.1■■□□□ 1.61
COL9A2-205ENST00000461118 KIAA1551Q9HCM1 1747 aa25.1■■□□□ 1.61
COL9A2-205ENST00000461118 SMARCC1Q92922 1105 aaPredicted RBP25.1■■□□□ 1.61
COL9A2-205ENST00000461118 HMGB2P26583 209 aaKnown RBP25.08■■□□□ 1.61
COL9A2-205ENST00000461118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.07■■□□□ 1.6
COL9A2-205ENST00000461118 LINC00116Q8NCU8 138 aa25.07■■□□□ 1.6
COL9A2-205ENST00000461118 AK7Q96M32 723 aa25.07■■□□□ 1.6
COL9A2-205ENST00000461118 ZNF831Q5JPB2 1677 aa25.05■■□□□ 1.6
COL9A2-205ENST00000461118 PHF14O94880 888 aa25.05■■□□□ 1.6
COL9A2-205ENST00000461118 EYA1Q99502 592 aa25.05■■□□□ 1.6
COL9A2-205ENST00000461118 NPC1L1Q9UHC9 1359 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms