RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
YIPF3-206ENST00000460903 DDX54Q8TDD1 881 aaKnown RBP21.96■■□□□ 1.11
YIPF3-206ENST00000460903 CD163L1Q9NR16 1453 aa21.96■■□□□ 1.11
YIPF3-206ENST00000460903 MSL1Q68DK7 614 aa21.95■■□□□ 1.1
YIPF3-206ENST00000460903 ITGB4P16144 1822 aa21.94■■□□□ 1.1
YIPF3-206ENST00000460903 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
YIPF3-206ENST00000460903 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
YIPF3-206ENST00000460903 NME9Q86XW9 330 aa21.93■■□□□ 1.1
YIPF3-206ENST00000460903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.93■■□□□ 1.1
YIPF3-206ENST00000460903 WDR90Q96KV7 1748 aa21.92■■□□□ 1.1
YIPF3-206ENST00000460903 SBNO2Q9Y2G9 1366 aa21.92■■□□□ 1.1
YIPF3-206ENST00000460903 MSH5O43196 834 aa21.92■■□□□ 1.1
YIPF3-206ENST00000460903 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
YIPF3-206ENST00000460903 C4BP0C0L5 1744 aa21.9■■□□□ 1.1
YIPF3-206ENST00000460903 CD2APQ9Y5K6 639 aa21.9■■□□□ 1.1
YIPF3-206ENST00000460903 CICQ96RK0 1608 aaPredicted RBP21.89■■□□□ 1.09
YIPF3-206ENST00000460903 KIAA1551Q9HCM1 1747 aa21.89■■□□□ 1.09
YIPF3-206ENST00000460903 KIF13BQ9NQT8 1826 aa21.88■■□□□ 1.09
YIPF3-206ENST00000460903 KIF3CO14782 793 aa21.88■■□□□ 1.09
YIPF3-206ENST00000460903 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
YIPF3-206ENST00000460903 MEGF6O75095 1541 aa21.87■■□□□ 1.09
YIPF3-206ENST00000460903 BRCA1P38398 1863 aaKnown RBP21.84■■□□□ 1.09
YIPF3-206ENST00000460903 USP47Q96K76 1375 aa21.84■■□□□ 1.09
YIPF3-206ENST00000460903 MAP2P11137 1827 aaKnown RBP21.83■■□□□ 1.09
YIPF3-206ENST00000460903 DNAJC5GQ8N7S2 189 aa21.83■■□□□ 1.09
YIPF3-206ENST00000460903 IP6K1Q92551 441 aa21.83■■□□□ 1.09
YIPF3-206ENST00000460903 LTV1Q96GA3 475 aaPredicted RBP21.83■■□□□ 1.09
YIPF3-206ENST00000460903 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
YIPF3-206ENST00000460903 IGSF1Q8N6C5 1336 aa21.82■■□□□ 1.08
YIPF3-206ENST00000460903 EDC4Q6P2E9 1401 aaKnown RBP21.81■■□□□ 1.08
YIPF3-206ENST00000460903 APLP1P51693 650 aa21.8■■□□□ 1.08
YIPF3-206ENST00000460903 PCNTO95613 3336 aa21.8■■□□□ 1.08
YIPF3-206ENST00000460903 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
YIPF3-206ENST00000460903 ZCRB1Q8TBF4 217 aaKnown RBP21.79■■□□□ 1.08
YIPF3-206ENST00000460903 L3MBTL2Q969R5 705 aa21.79■■□□□ 1.08
YIPF3-206ENST00000460903 AMIGO3Q86WK7 504 aa21.78■■□□□ 1.08
YIPF3-206ENST00000460903 A0A1W2PP64 1363 aa21.76■■□□□ 1.07
YIPF3-206ENST00000460903 PKD1L3Q7Z443 1732 aa21.76■■□□□ 1.07
YIPF3-206ENST00000460903 FLAD1Q8NFF5 587 aa21.75■■□□□ 1.07
YIPF3-206ENST00000460903 ARFGEF1Q9Y6D6 1849 aa21.75■■□□□ 1.07
YIPF3-206ENST00000460903 SMIM5Q71RC9 77 aa21.74■■□□□ 1.07
YIPF3-206ENST00000460903 SLC12A5Q9H2X9 1139 aa21.74■■□□□ 1.07
YIPF3-206ENST00000460903 MAP3K19Q56UN5 1328 aa21.74■■□□□ 1.07
YIPF3-206ENST00000460903 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
YIPF3-206ENST00000460903 HOXC9P31274 260 aa21.73■■□□□ 1.07
YIPF3-206ENST00000460903 TOMM70O94826 608 aa21.72■■□□□ 1.07
YIPF3-206ENST00000460903 FBLN1P23142 703 aa21.72■■□□□ 1.07
YIPF3-206ENST00000460903 HDGFL2Q7Z4V5 671 aaPredicted RBP21.72■■□□□ 1.07
YIPF3-206ENST00000460903 TMC1Q8TDI8 760 aa21.72■■□□□ 1.07
YIPF3-206ENST00000460903 COL13A1Q5TAT6 717 aaPredicted RBP21.71■■□□□ 1.07
YIPF3-206ENST00000460903 SBF1O95248 1867 aa21.71■■□□□ 1.07
YIPF3-206ENST00000460903 PXDNLA1KZ92 1463 aa21.69■■□□□ 1.06
YIPF3-206ENST00000460903 NBPF6Q5VWK0 638 aa21.68■■□□□ 1.06
YIPF3-206ENST00000460903 USHBP1Q8N6Y0 703 aa21.68■■□□□ 1.06
YIPF3-206ENST00000460903 NBPF4Q96M43 638 aa21.68■■□□□ 1.06
YIPF3-206ENST00000460903 PHF14O94880 888 aa21.67■■□□□ 1.06
YIPF3-206ENST00000460903 AK7Q96M32 723 aa21.67■■□□□ 1.06
YIPF3-206ENST00000460903 NMRK2Q9NPI5 230 aa21.67■■□□□ 1.06
YIPF3-206ENST00000460903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.66■■□□□ 1.06
YIPF3-206ENST00000460903 AMPHP49418 695 aa21.66■■□□□ 1.06
YIPF3-206ENST00000460903 HTRA3P83110 453 aa21.66■■□□□ 1.06
YIPF3-206ENST00000460903 KIF20BQ96Q89 1820 aa21.66■■□□□ 1.06
YIPF3-206ENST00000460903 TNRC6CQ9HCJ0 1690 aaKnown RBP21.66■■□□□ 1.06
YIPF3-206ENST00000460903 CGNL1Q0VF96 1302 aa21.65■■□□□ 1.06
YIPF3-206ENST00000460903 CAPN15O75808 1086 aa21.65■■□□□ 1.06
YIPF3-206ENST00000460903 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
YIPF3-206ENST00000460903 TERF2IPQ9NYB0 399 aa21.65■■□□□ 1.06
YIPF3-206ENST00000460903 NSD3Q9BZ95 1437 aa21.64■■□□□ 1.06
YIPF3-206ENST00000460903 C4AP0C0L4 1744 aa21.63■■□□□ 1.05
YIPF3-206ENST00000460903 RTL1A6NKG5 1358 aa21.63■■□□□ 1.05
YIPF3-206ENST00000460903 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
YIPF3-206ENST00000460903 KLRG1Q96E93 195 aa21.63■■□□□ 1.05
YIPF3-206ENST00000460903 PCDH11XQ9BZA7 1347 aa21.62■■□□□ 1.05
YIPF3-206ENST00000460903 PCDH11YQ9BZA8 1340 aa21.62■■□□□ 1.05
YIPF3-206ENST00000460903 COL5A3P25940 1745 aaPredicted RBP21.62■■□□□ 1.05
YIPF3-206ENST00000460903 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
YIPF3-206ENST00000460903 SSFA2P28290 1259 aa21.61■■□□□ 1.05
YIPF3-206ENST00000460903 RAPGEF4Q8WZA2 1011 aa21.61■■□□□ 1.05
YIPF3-206ENST00000460903 COG3Q96JB2 828 aa21.61■■□□□ 1.05
YIPF3-206ENST00000460903 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
YIPF3-206ENST00000460903 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
YIPF3-206ENST00000460903 CYP27B1O15528 508 aa21.6■■□□□ 1.05
YIPF3-206ENST00000460903 LINC00116Q8NCU8 138 aa21.6■■□□□ 1.05
YIPF3-206ENST00000460903 TATP17735 454 aaPredicted RBP21.59■■□□□ 1.05
YIPF3-206ENST00000460903 RRS1Q15050 365 aaKnown RBP21.59■■□□□ 1.05
YIPF3-206ENST00000460903 RBM46Q8TBY0 533 aaKnown RBP21.59■■□□□ 1.05
YIPF3-206ENST00000460903 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.05
YIPF3-206ENST00000460903 C10orf71Q711Q0 1435 aa21.58■■□□□ 1.05
YIPF3-206ENST00000460903 SMARCC1Q92922 1105 aaPredicted RBP21.58■■□□□ 1.05
YIPF3-206ENST00000460903 BCS1LQ9Y276 419 aa21.58■■□□□ 1.05
YIPF3-206ENST00000460903 ZNF831Q5JPB2 1677 aa21.57■■□□□ 1.04
YIPF3-206ENST00000460903 SMG6Q86US8 1419 aaKnown RBP21.57■■□□□ 1.04
YIPF3-206ENST00000460903 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
YIPF3-206ENST00000460903 MMP10P09238 476 aa21.56■■□□□ 1.04
YIPF3-206ENST00000460903 PRELPP51888 382 aa21.56■■□□□ 1.04
YIPF3-206ENST00000460903 TNS4Q8IZW8 715 aa21.56■■□□□ 1.04
YIPF3-206ENST00000460903 PIGBQ92521 554 aa21.56■■□□□ 1.04
YIPF3-206ENST00000460903 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
YIPF3-206ENST00000460903 A0A0G2JLW4 131 aa21.55■■□□□ 1.04
YIPF3-206ENST00000460903 ARHGAP27Q6ZUM4 889 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms