RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ERVH48-1M5A8F1 160 aa5.26□□□□□ -1.57
HPS3-203ENST00000460822 TMPRSS4Q9NRS4 437 aa5.26□□□□□ -1.57
HPS3-203ENST00000460822 SOBPA7XYQ1 873 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 RNF225M0QZC1 329 aaPredicted RBP5.25□□□□□ -1.57
HPS3-203ENST00000460822 GIGYF1O75420 1035 aaPredicted RBP5.25□□□□□ -1.57
HPS3-203ENST00000460822 RELBQ01201 579 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 Q6ZVU0 165 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 ZBTB7CA1YPR0 619 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 TTLL8A6PVC2 850 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 ESPNB1AK53 854 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 IGHA1P01876 353 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.25□□□□□ -1.57
HPS3-203ENST00000460822 ZNF784Q8NCA9 323 aaPredicted RBP5.25□□□□□ -1.57
HPS3-203ENST00000460822 CCDC97Q96F63 343 aaPredicted RBP5.25□□□□□ -1.57
HPS3-203ENST00000460822 COG6Q9Y2V7 657 aa5.25□□□□□ -1.57
HPS3-203ENST00000460822 AGBL1Q96MI9 1066 aa5.24□□□□□ -1.57
HPS3-203ENST00000460822 POLMQ9NP87 494 aaPredicted RBP5.24□□□□□ -1.57
HPS3-203ENST00000460822 CYLDQ9NQC7 956 aa5.24□□□□□ -1.57
HPS3-203ENST00000460822 ADAMTS8Q9UP79 889 aa5.24□□□□□ -1.57
HPS3-203ENST00000460822 SOS2Q07890 1332 aaPredicted RBP5.24□□□□□ -1.57
HPS3-203ENST00000460822 FIGNL2A6NMB9 653 aa5.24□□□□□ -1.57
HPS3-203ENST00000460822 ADH1AP07327 375 aa5.24□□□□□ -1.57
HPS3-203ENST00000460822 EIF4G2P78344 907 aaKnown RBP eCLIP5.24□□□□□ -1.57
HPS3-203ENST00000460822 SERPINA10Q9UK55 444 aa5.24□□□□□ -1.57
HPS3-203ENST00000460822 SPINT1O43278 529 aa5.23□□□□□ -1.57
HPS3-203ENST00000460822 PPFIA3O75145 1194 aa5.23□□□□□ -1.57
HPS3-203ENST00000460822 NPM2Q86SE8 214 aaKnown RBP5.23□□□□□ -1.57
HPS3-203ENST00000460822 ZNF395Q9H8N7 513 aaPredicted RBP5.23□□□□□ -1.57
HPS3-203ENST00000460822 TBC1D2BQ9UPU7 963 aa5.23□□□□□ -1.57
HPS3-203ENST00000460822 PTGIRP43119 386 aa5.22□□□□□ -1.57
HPS3-203ENST00000460822 WWC1Q8IX03 1113 aa5.22□□□□□ -1.57
HPS3-203ENST00000460822 ABL2P42684 1182 aa5.22□□□□□ -1.57
HPS3-203ENST00000460822 CC2D2BQ6DHV5 1058 aa5.22□□□□□ -1.57
HPS3-203ENST00000460822 DNMT3LQ9UJW3 386 aa5.22□□□□□ -1.57
HPS3-203ENST00000460822 PCDHB11Q9Y5F2 797 aa5.22□□□□□ -1.57
HPS3-203ENST00000460822 ATP5J2-PTCD1G3V325 749 aa5.21□□□□□ -1.58
HPS3-203ENST00000460822 LILRA1O75019 489 aa5.21□□□□□ -1.58
HPS3-203ENST00000460822 INSM2Q96T92 566 aaPredicted RBP5.21□□□□□ -1.58
HPS3-203ENST00000460822 DNMT3AQ9Y6K1 912 aaPredicted RBP5.21□□□□□ -1.58
HPS3-203ENST00000460822 MYCP01106 439 aaPredicted RBP5.2□□□□□ -1.58
HPS3-203ENST00000460822 ADD1P35611 737 aaKnown RBP5.2□□□□□ -1.58
HPS3-203ENST00000460822 WASHC4Q2M389 1173 aa5.2□□□□□ -1.58
HPS3-203ENST00000460822 GDPD2Q9HCC8 539 aa5.2□□□□□ -1.58
HPS3-203ENST00000460822 CCDC9Q9Y3X0 531 aaKnown RBP5.2□□□□□ -1.58
HPS3-203ENST00000460822 CTSOP43234 321 aaPredicted RBP5.2□□□□□ -1.58
HPS3-203ENST00000460822 FOXK2Q01167 660 aa5.2□□□□□ -1.58
HPS3-203ENST00000460822 SLFNL1Q499Z3 407 aa5.2□□□□□ -1.58
HPS3-203ENST00000460822 CYP2U1Q7Z449 544 aa5.2□□□□□ -1.58
HPS3-203ENST00000460822 NLRP3Q96P20 1036 aa5.2□□□□□ -1.58
HPS3-203ENST00000460822 MEN1O00255 615 aa5.19□□□□□ -1.58
HPS3-203ENST00000460822 CEP126Q9P2H0 1117 aa5.19□□□□□ -1.58
HPS3-203ENST00000460822 ERVK-9P63128 1117 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 KRT76Q01546 638 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 PTSQ03393 145 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 VAC14Q08AM6 782 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 SEMA3FQ13275 785 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 GPR37L1O60883 481 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 KANK3Q6NY19 840 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 LYSMD3Q7Z3D4 306 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 GPR161Q8N6U8 529 aaKnown RBP5.18□□□□□ -1.58
HPS3-203ENST00000460822 RETREG2Q8NC44 543 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 TRAIPQ9BWF2 469 aa5.18□□□□□ -1.58
HPS3-203ENST00000460822 SOX11P35716 441 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 IRF5Q13568 498 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 SLC27A3Q5K4L6 730 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 RNF135Q8IUD6 432 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 RNF217Q8TC41 542 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 CNTNAP3BQ96NU0 1288 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 CNTNAP3Q9BZ76 1288 aa5.17□□□□□ -1.58
HPS3-203ENST00000460822 A0A1W2PRU2 124 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 GTF2E1P29083 439 aaPredicted RBP5.16□□□□□ -1.58
HPS3-203ENST00000460822 ZNF385CQ66K41 422 aaPredicted RBP5.16□□□□□ -1.58
HPS3-203ENST00000460822 GPAT2Q6NUI2 795 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 AEBP1Q8IUX7 1158 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 CCDC155Q8N6L0 562 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 SIRT1Q96EB6 747 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 DOLKQ9UPQ8 538 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 ARHGEF15O94989 841 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 RNF144AP50876 292 aaPredicted RBP5.16□□□□□ -1.58
HPS3-203ENST00000460822 USP4Q13107 963 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 PRICKLE2Q7Z3G6 844 aa5.16□□□□□ -1.58
HPS3-203ENST00000460822 NANOS1Q8WY41 292 aaKnown RBP5.16□□□□□ -1.58
HPS3-203ENST00000460822 CALR3Q96L12 384 aaKnown RBP5.16□□□□□ -1.58
HPS3-203ENST00000460822 SLC35F4A4IF30 521 aa5.15□□□□□ -1.58
HPS3-203ENST00000460822 GPC1P35052 558 aa5.15□□□□□ -1.58
HPS3-203ENST00000460822 FOXD4L5Q5VV16 416 aaPredicted RBP5.15□□□□□ -1.58
HPS3-203ENST00000460822 CDC14CA4D256 554 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 POM121CA8CG34 1229 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 GNRH1P01148 92 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 IRS1P35568 1242 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 SCTRP47872 440 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 OXLD1Q5BKU9 147 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 SV2AQ7L0J3 742 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 KDF1Q8NAX2 398 aaPredicted RBP5.15□□□□□ -1.59
HPS3-203ENST00000460822 GLMNQ92990 594 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 CCDC85AQ96PX6 553 aaPredicted RBP5.15□□□□□ -1.59
HPS3-203ENST00000460822 ARHGEF10LQ9HCE6 1279 aa5.15□□□□□ -1.59
HPS3-203ENST00000460822 SLURP2P0DP57 97 aa5.14□□□□□ -1.59
HPS3-203ENST00000460822 RHOQP17081 205 aa5.14□□□□□ -1.59
HPS3-203ENST00000460822 ESCO1Q5FWF5 840 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms