RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 USP17L10C9JJH3 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L13C9JLJ4 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L12C9JPN9 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L11C9JVI0 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L21D6R901 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L18D6R9N7 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L22D6RA61 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L17D6RBQ6 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L19D6RCP7 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L20D6RJB6 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 SIAH2O43255 324 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 ZIC2O95409 532 aaPredicted RBP6.02□□□□□ -1.45
CCDC93-204ENST00000460781 USP17L24Q0WX57 530 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 PHTF2Q8N3S3 785 aa6.02□□□□□ -1.45
CCDC93-204ENST00000460781 ZNF784Q8NCA9 323 aaPredicted RBP6.02□□□□□ -1.45
CCDC93-204ENST00000460781 EMID1Q96A84 441 aaPredicted RBP6.02□□□□□ -1.45
CCDC93-204ENST00000460781 NOVA2Q9UNW9 492 aaKnown RBP6.02□□□□□ -1.45
CCDC93-204ENST00000460781 CCDC180Q9P1Z9 1646 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 FAM196BA6NMK8 535 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 J3QL48 77 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 BACH1O14867 736 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 GDF9O60383 454 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 GRM5P41594 1212 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 LAPTM4AQ15012 233 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 LARGE2Q8N3Y3 721 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 TPCN2Q8NHX9 752 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 NLRP3Q96P20 1036 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 TMPRSS4Q9NRS4 437 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 CHMP3Q9Y3E7 222 aa6.01□□□□□ -1.45
CCDC93-204ENST00000460781 ATG7O95352 703 aa6□□□□□ -1.45
CCDC93-204ENST00000460781 ERVK-9P63128 1117 aa6□□□□□ -1.45
CCDC93-204ENST00000460781 CCDC102BQ68D86 513 aa6□□□□□ -1.45
CCDC93-204ENST00000460781 TRAF7Q6Q0C0 670 aa6□□□□□ -1.45
CCDC93-204ENST00000460781 HINFPQ9BQA5 517 aa6□□□□□ -1.45
CCDC93-204ENST00000460781 USTQ9Y2C2 406 aa6□□□□□ -1.45
CCDC93-204ENST00000460781 CAPN5O15484 640 aaPredicted RBP5.99□□□□□ -1.45
CCDC93-204ENST00000460781 GFRA3O60609 400 aa5.99□□□□□ -1.45
CCDC93-204ENST00000460781 SEC13P55735 322 aa5.99□□□□□ -1.45
CCDC93-204ENST00000460781 SCARF1Q14162 830 aa5.99□□□□□ -1.45
CCDC93-204ENST00000460781 ANKMY2Q8IV38 441 aa5.99□□□□□ -1.45
CCDC93-204ENST00000460781 VTI1AQ96AJ9 217 aa5.99□□□□□ -1.45
CCDC93-204ENST00000460781 CDCA7Q9BWT1 371 aaPredicted RBP5.99□□□□□ -1.45
CCDC93-204ENST00000460781 PATL2C9JE40 543 aaKnown RBP5.98□□□□□ -1.45
CCDC93-204ENST00000460781 MEN1O00255 615 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 NRG2O14511 850 aaPredicted RBP5.98□□□□□ -1.45
CCDC93-204ENST00000460781 GNRH1P01148 92 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 ADH1AP07327 375 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 NR3C2P08235 984 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 RELBQ01201 579 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 DPYDQ12882 1025 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 RETREG2Q8NC44 543 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 TSEN34Q9BSV6 310 aaKnown RBP5.98□□□□□ -1.45
CCDC93-204ENST00000460781 TOR4AQ9NXH8 423 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 CHIC2Q9UKJ5 165 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 MTMR7Q9Y216 660 aa5.98□□□□□ -1.45
CCDC93-204ENST00000460781 BMP2P12643 396 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 SMPD1P17405 629 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 SCTRP47872 440 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 GDF10P55107 478 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 ELOAQ14241 798 aaKnown RBP5.97□□□□□ -1.45
CCDC93-204ENST00000460781 TSGA10IPQ3SY00 556 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 KANK4Q5T7N3 995 aaPredicted RBP5.97□□□□□ -1.45
CCDC93-204ENST00000460781 NBPF15Q8N660 670 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 ITPKCQ96DU7 683 aa5.97□□□□□ -1.45
CCDC93-204ENST00000460781 IRX2Q9BZI1 471 aaPredicted RBP5.97□□□□□ -1.45
CCDC93-204ENST00000460781 ZBTB7CA1YPR0 619 aa5.96□□□□□ -1.46
CCDC93-204ENST00000460781 DGAT1O75907 488 aa5.96□□□□□ -1.46
CCDC93-204ENST00000460781 CRTC2Q53ET0 693 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-204ENST00000460781 SLC27A3Q5K4L6 730 aa5.96□□□□□ -1.46
CCDC93-204ENST00000460781 SIX5Q8N196 739 aa5.96□□□□□ -1.46
CCDC93-204ENST00000460781 ZFAND3Q9H8U3 227 aa5.96□□□□□ -1.46
CCDC93-204ENST00000460781 ARHGEF10LQ9HCE6 1279 aa5.96□□□□□ -1.46
CCDC93-204ENST00000460781 POLMQ9NP87 494 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-204ENST00000460781 AXIN1O15169 862 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 TIMP2P16035 220 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 CLDN10P78369 228 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 CBLBQ13191 982 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 PTK7Q13308 1070 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 TLR1Q15399 786 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 SWI5Q1ZZU3 235 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 CTC1Q2NKJ3 1217 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 GNASQ5JWF2 1037 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 HPS1Q92902 700 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 OSBPL3Q9H4L5 887 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 RAB6BQ9NRW1 208 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 SERTAD1Q9UHV2 236 aa5.95□□□□□ -1.46
CCDC93-204ENST00000460781 PTGIRP43119 386 aa5.94□□□□□ -1.46
CCDC93-204ENST00000460781 C6orf118Q5T5N4 469 aa5.94□□□□□ -1.46
CCDC93-204ENST00000460781 TMEM214Q6NUQ4 689 aaKnown RBP5.94□□□□□ -1.46
CCDC93-204ENST00000460781 KCTD17Q8N5Z5 321 aa5.94□□□□□ -1.46
CCDC93-204ENST00000460781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.94□□□□□ -1.465e-12■■■■■ 96.1
CCDC93-204ENST00000460781 SFI1A8K8P3 1242 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 LILRA1O75019 489 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 INHAP05111 366 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 TRIM67Q6ZTA4 783 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 LINC00528Q8N1L1 170 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 MEIOBQ8N635 442 aa5.93□□□□□ -1.46
CCDC93-204ENST00000460781 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.93□□□□□ -1.46
CCDC93-204ENST00000460781 STK32AQ8WU08 396 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms