RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
SYPL1-203ENST00000460770 ADD1P35611 737 aaKnown RBP6.38□□□□□ -1.39
SYPL1-203ENST00000460770 RNF144AP50876 292 aaPredicted RBP6.38□□□□□ -1.39
SYPL1-203ENST00000460770 COL25A1Q9BXS0 654 aaPredicted RBP6.38□□□□□ -1.39
SYPL1-203ENST00000460770 MEN1O00255 615 aa6.37□□□□□ -1.39
SYPL1-203ENST00000460770 VWA5B2Q8N398 1253 aa6.37□□□□□ -1.39
SYPL1-203ENST00000460770 H7C1W4 665 aa6.36□□□□□ -1.39
SYPL1-203ENST00000460770 MYCP01106 439 aaPredicted RBP6.36□□□□□ -1.39
SYPL1-203ENST00000460770 ERVK-9P63128 1117 aa6.36□□□□□ -1.39
SYPL1-203ENST00000460770 SLC27A3Q5K4L6 730 aa6.36□□□□□ -1.39
SYPL1-203ENST00000460770 FOXD4L5Q5VV16 416 aaPredicted RBP6.36□□□□□ -1.39
SYPL1-203ENST00000460770 SVOPQ8N4V2 548 aa6.36□□□□□ -1.39
SYPL1-203ENST00000460770 GTF2E1P29083 439 aaPredicted RBP6.35□□□□□ -1.39
SYPL1-203ENST00000460770 PRICKLE2Q7Z3G6 844 aa6.35□□□□□ -1.39
SYPL1-203ENST00000460770 GPR161Q8N6U8 529 aaKnown RBP6.35□□□□□ -1.39
SYPL1-203ENST00000460770 PCDHB11Q9Y5F2 797 aa6.35□□□□□ -1.39
SYPL1-203ENST00000460770 A0A1W2PRU2 124 aa6.34□□□□□ -1.39
SYPL1-203ENST00000460770 SLURP2P0DP57 97 aa6.34□□□□□ -1.39
SYPL1-203ENST00000460770 EIF4G2P78344 907 aaKnown RBP eCLIP6.34□□□□□ -1.39
SYPL1-203ENST00000460770 MAP3K10Q02779 954 aa6.34□□□□□ -1.39
SYPL1-203ENST00000460770 KDF1Q8NAX2 398 aaPredicted RBP6.34□□□□□ -1.39
SYPL1-203ENST00000460770 MTMR14Q8NCE2 650 aa6.34□□□□□ -1.39
SYPL1-203ENST00000460770 TRERF1Q96PN7 1200 aa6.34□□□□□ -1.39
SYPL1-203ENST00000460770 SENP3-EIF4A1A0A087X0R7 540 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 KRT76Q01546 638 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 KCNMA1Q12791 1236 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 CLN3Q13286 438 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 WDR44Q5JSH3 913 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 TRIM22Q8IYM9 498 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 ENAMQ9NRM1 1142 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 DYRK1BQ9Y463 629 aa6.33□□□□□ -1.4
SYPL1-203ENST00000460770 GNRH1P01148 92 aa6.32□□□□□ -1.4
SYPL1-203ENST00000460770 SRSF11Q05519 484 aaKnown RBP6.32□□□□□ -1.4
SYPL1-203ENST00000460770 TPRNQ4KMQ1 711 aa6.32□□□□□ -1.4
SYPL1-203ENST00000460770 RIPOR1Q6ZS17 1223 aa6.32□□□□□ -1.4
SYPL1-203ENST00000460770 NSFL1CQ9UNZ2 370 aaKnown RBP6.32□□□□□ -1.4
SYPL1-203ENST00000460770 RHOQP17081 205 aa6.31□□□□□ -1.4
SYPL1-203ENST00000460770 MARSP56192 900 aaKnown RBP6.31□□□□□ -1.4
SYPL1-203ENST00000460770 RNFT1Q5M7Z0 435 aa6.31□□□□□ -1.4
SYPL1-203ENST00000460770 SIRT1Q96EB6 747 aa6.31□□□□□ -1.4
SYPL1-203ENST00000460770 ADAMTS8Q9UP79 889 aa6.31□□□□□ -1.4
SYPL1-203ENST00000460770 ADAMTS2O95450 1211 aa6.3□□□□□ -1.4
SYPL1-203ENST00000460770 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
SYPL1-203ENST00000460770 ZNF385CQ66K41 422 aaPredicted RBP6.3□□□□□ -1.4
SYPL1-203ENST00000460770 TAS1R3Q7RTX0 852 aa6.3□□□□□ -1.4
SYPL1-203ENST00000460770 TMEM151AQ8N4L1 468 aa6.3□□□□□ -1.4
SYPL1-203ENST00000460770 SCARF2Q96GP6 870 aaPredicted RBP6.3□□□□□ -1.4
SYPL1-203ENST00000460770 SNRKQ9NRH2 765 aa6.3□□□□□ -1.4
SYPL1-203ENST00000460770 CEP126Q9P2H0 1117 aa6.3□□□□□ -1.4
SYPL1-203ENST00000460770 SPATA31C2B4DYI2 1134 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 WASLO00401 505 aaPredicted RBP6.29□□□□□ -1.4
SYPL1-203ENST00000460770 TRAK2O60296 914 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 USP4Q13107 963 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 SLFNL1Q499Z3 407 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 GNASQ5JWF2 1037 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
SYPL1-203ENST00000460770 NBPF15Q8N660 670 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 GAS2L1Q99501 681 aaPredicted RBP6.29□□□□□ -1.4
SYPL1-203ENST00000460770 GRIP2Q9C0E4 1043 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 ARHGEF10LQ9HCE6 1279 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 TIMMDC1Q9NPL8 285 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 MBIPQ9NS73 344 aa6.29□□□□□ -1.4
SYPL1-203ENST00000460770 GDF11O95390 407 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 F11P03951 625 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 SCTRP47872 440 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 POU4F2Q12837 409 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 ZNF837Q96EG3 531 aaPredicted RBP6.28□□□□□ -1.4
SYPL1-203ENST00000460770 ESYT1Q9BSJ8 1104 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 OSBPL3Q9H4L5 887 aa6.28□□□□□ -1.4
SYPL1-203ENST00000460770 RASSF7Q02833 373 aa6.27□□□□□ -1.41
SYPL1-203ENST00000460770 WASHC4Q2M389 1173 aa6.27□□□□□ -1.41
SYPL1-203ENST00000460770 CNKSR1Q969H4 720 aa6.27□□□□□ -1.41
SYPL1-203ENST00000460770 ZSCAN10Q96SZ4 725 aaPredicted RBP6.27□□□□□ -1.41
SYPL1-203ENST00000460770 DOLKQ9UPQ8 538 aa6.27□□□□□ -1.41
SYPL1-203ENST00000460770 PHF24Q9UPV7 400 aa6.27□□□□□ -1.41
SYPL1-203ENST00000460770 A0A1B0GTH6 734 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 CSB-PGBD3P0DP91 1061 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 SOX11P35716 441 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 TMEM214Q6NUQ4 689 aaKnown RBP6.26□□□□□ -1.41
SYPL1-203ENST00000460770 PODNQ7Z5L7 613 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 RNF135Q8IUD6 432 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 PGBD3Q8N328 593 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 NUCKS1Q9H1E3 243 aaKnown RBP6.26□□□□□ -1.41
SYPL1-203ENST00000460770 LRRC4BQ9NT99 713 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 TBC1D2BQ9UPU7 963 aa6.26□□□□□ -1.41
SYPL1-203ENST00000460770 GPR37L1O60883 481 aa6.25□□□□□ -1.41
SYPL1-203ENST00000460770 ARHGEF15O94989 841 aa6.25□□□□□ -1.41
SYPL1-203ENST00000460770 MX2P20592 715 aa6.25□□□□□ -1.41
SYPL1-203ENST00000460770 CENPCQ03188 943 aa6.25□□□□□ -1.41
SYPL1-203ENST00000460770 GAS6Q14393 721 aa6.25□□□□□ -1.41
SYPL1-203ENST00000460770 LBRQ14739 615 aaKnown RBP6.25□□□□□ -1.41
SYPL1-203ENST00000460770 WWC1Q8IX03 1113 aa6.25□□□□□ -1.41
SYPL1-203ENST00000460770 GTPBP3Q969Y2 492 aaKnown RBP6.25□□□□□ -1.41
SYPL1-203ENST00000460770 CUEDC1Q9NWM3 386 aaPredicted RBP6.25□□□□□ -1.41
SYPL1-203ENST00000460770 IGF1RP08069 1367 aa6.24□□□□□ -1.41
SYPL1-203ENST00000460770 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
SYPL1-203ENST00000460770 PHF20L1A8MW92 1017 aa6.24□□□□□ -1.41
SYPL1-203ENST00000460770 FOXK2Q01167 660 aa6.24□□□□□ -1.41
SYPL1-203ENST00000460770 DBN1Q16643 649 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms