RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
SHISA5-211ENST00000460758 PAPPAQ13219 1627 aa17.63■□□□□ 0.41
SHISA5-211ENST00000460758 KCNQ2O43526 872 aa17.63■□□□□ 0.41
SHISA5-211ENST00000460758 TOGARAM1Q9Y4F4 1720 aa17.62■□□□□ 0.41
SHISA5-211ENST00000460758 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
SHISA5-211ENST00000460758 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
SHISA5-211ENST00000460758 LY75O60449 1722 aa17.61■□□□□ 0.41
SHISA5-211ENST00000460758 NSD2O96028 1365 aa17.61■□□□□ 0.41
SHISA5-211ENST00000460758 PROM2Q8N271 834 aa17.6■□□□□ 0.41
SHISA5-211ENST00000460758 ITGB4P16144 1822 aa17.6■□□□□ 0.41
SHISA5-211ENST00000460758 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
SHISA5-211ENST00000460758 PPM1GO15355 546 aaPredicted RBP17.59■□□□□ 0.41
SHISA5-211ENST00000460758 DDX54Q8TDD1 881 aaKnown RBP17.59■□□□□ 0.41
SHISA5-211ENST00000460758 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
SHISA5-211ENST00000460758 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.4
SHISA5-211ENST00000460758 TUBGCP6Q96RT7 1819 aa17.57■□□□□ 0.4
SHISA5-211ENST00000460758 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
SHISA5-211ENST00000460758 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
SHISA5-211ENST00000460758 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
SHISA5-211ENST00000460758 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
SHISA5-211ENST00000460758 RAPGEF4Q8WZA2 1011 aa17.56■□□□□ 0.4
SHISA5-211ENST00000460758 QSER1Q2KHR3 1735 aa17.55■□□□□ 0.4
SHISA5-211ENST00000460758 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
SHISA5-211ENST00000460758 TATP17735 454 aaPredicted RBP17.54■□□□□ 0.4
SHISA5-211ENST00000460758 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
SHISA5-211ENST00000460758 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
SHISA5-211ENST00000460758 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
SHISA5-211ENST00000460758 EYA1Q99502 592 aa17.52■□□□□ 0.4
SHISA5-211ENST00000460758 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
SHISA5-211ENST00000460758 AMER1Q5JTC6 1135 aaPredicted RBP17.51■□□□□ 0.39
SHISA5-211ENST00000460758 KNSTRNQ9Y448 316 aa17.51■□□□□ 0.39
SHISA5-211ENST00000460758 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
SHISA5-211ENST00000460758 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
SHISA5-211ENST00000460758 C5P01031 1676 aa17.5■□□□□ 0.39
SHISA5-211ENST00000460758 CYP27B1O15528 508 aa17.49■□□□□ 0.39
SHISA5-211ENST00000460758 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
SHISA5-211ENST00000460758 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
SHISA5-211ENST00000460758 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
SHISA5-211ENST00000460758 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
SHISA5-211ENST00000460758 LRRC4BQ9NT99 713 aa17.48■□□□□ 0.39
SHISA5-211ENST00000460758 VIRMAQ69YN4 1812 aaKnown RBP17.47■□□□□ 0.39
SHISA5-211ENST00000460758 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
SHISA5-211ENST00000460758 SLC15A2Q16348 729 aa17.46■□□□□ 0.39
SHISA5-211ENST00000460758 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
SHISA5-211ENST00000460758 COL24A1Q17RW2 1714 aa17.45■□□□□ 0.38
SHISA5-211ENST00000460758 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
SHISA5-211ENST00000460758 KCNQ4P56696 695 aa17.43■□□□□ 0.38
SHISA5-211ENST00000460758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.38
SHISA5-211ENST00000460758 SPG7Q9UQ90 795 aa17.43■□□□□ 0.38
SHISA5-211ENST00000460758 NKX1-1Q15270 411 aaPredicted RBP17.42■□□□□ 0.38
SHISA5-211ENST00000460758 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
SHISA5-211ENST00000460758 CC2D1BQ5T0F9 858 aaKnown RBP17.42■□□□□ 0.38
SHISA5-211ENST00000460758 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
SHISA5-211ENST00000460758 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
SHISA5-211ENST00000460758 SCN11AQ9UI33 1791 aa17.41■□□□□ 0.38
SHISA5-211ENST00000460758 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
SHISA5-211ENST00000460758 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
SHISA5-211ENST00000460758 KDRP35968 1356 aa17.4■□□□□ 0.38
SHISA5-211ENST00000460758 COL3A1P02461 1466 aaPredicted RBP17.4■□□□□ 0.38
SHISA5-211ENST00000460758 ZBTB7AO95365 584 aa17.4■□□□□ 0.38
SHISA5-211ENST00000460758 PHKG2P15735 406 aa17.4■□□□□ 0.38
SHISA5-211ENST00000460758 AEBP1Q8IUX7 1158 aa17.4■□□□□ 0.38
SHISA5-211ENST00000460758 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
SHISA5-211ENST00000460758 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
SHISA5-211ENST00000460758 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.38
SHISA5-211ENST00000460758 IL13P35225 146 aa17.39■□□□□ 0.37
SHISA5-211ENST00000460758 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
SHISA5-211ENST00000460758 CCNL1Q9UK58 526 aaPredicted RBP17.39■□□□□ 0.37
SHISA5-211ENST00000460758 MTHFSP49914 203 aa17.38■□□□□ 0.37
SHISA5-211ENST00000460758 IFNL2Q8IZJ0 200 aa17.38■□□□□ 0.37
SHISA5-211ENST00000460758 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
SHISA5-211ENST00000460758 PTGER2P43116 358 aa17.37■□□□□ 0.37
SHISA5-211ENST00000460758 ZNF831Q5JPB2 1677 aa17.36■□□□□ 0.37
SHISA5-211ENST00000460758 COL5A3P25940 1745 aaPredicted RBP17.36■□□□□ 0.37
SHISA5-211ENST00000460758 PIGBQ92521 554 aa17.36■□□□□ 0.37
SHISA5-211ENST00000460758 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
SHISA5-211ENST00000460758 PNPLA7Q6ZV29 1317 aa17.36■□□□□ 0.37
SHISA5-211ENST00000460758 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
SHISA5-211ENST00000460758 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
SHISA5-211ENST00000460758 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
SHISA5-211ENST00000460758 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
SHISA5-211ENST00000460758 SGIP1Q9BQI5 828 aa17.34■□□□□ 0.37
SHISA5-211ENST00000460758 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
SHISA5-211ENST00000460758 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.36
SHISA5-211ENST00000460758 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.36
SHISA5-211ENST00000460758 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
SHISA5-211ENST00000460758 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
SHISA5-211ENST00000460758 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
SHISA5-211ENST00000460758 TFCP2L1Q9NZI6 479 aa17.32■□□□□ 0.36
SHISA5-211ENST00000460758 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
SHISA5-211ENST00000460758 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
SHISA5-211ENST00000460758 DCAF5Q96JK2 942 aa17.3■□□□□ 0.36
SHISA5-211ENST00000460758 ASAP1Q9ULH1 1129 aa17.3■□□□□ 0.36
SHISA5-211ENST00000460758 TJP1Q07157 1748 aa17.3■□□□□ 0.36
SHISA5-211ENST00000460758 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
SHISA5-211ENST00000460758 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
SHISA5-211ENST00000460758 HMOX1P09601 288 aa17.29■□□□□ 0.36
SHISA5-211ENST00000460758 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
SHISA5-211ENST00000460758 MRC1P22897 1456 aa17.29■□□□□ 0.36
SHISA5-211ENST00000460758 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms