RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 USP47Q96K76 1375 aa15.37■□□□□ 0.05
VAMP7-203ENST00000460621 HSP90AB2PQ58FF8 381 aa15.37■□□□□ 0.05
VAMP7-203ENST00000460621 ZCRB1Q8TBF4 217 aaKnown RBP15.37■□□□□ 0.05
VAMP7-203ENST00000460621 PNPLA7Q6ZV29 1317 aa15.37■□□□□ 0.05
VAMP7-203ENST00000460621 ARXQ96QS3 562 aa15.36■□□□□ 0.05
VAMP7-203ENST00000460621 SYTL4Q96C24 671 aaPredicted RBP15.35■□□□□ 0.05
VAMP7-203ENST00000460621 TMF1P82094 1093 aa15.34■□□□□ 0.05
VAMP7-203ENST00000460621 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
VAMP7-203ENST00000460621 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
VAMP7-203ENST00000460621 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
VAMP7-203ENST00000460621 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.04
VAMP7-203ENST00000460621 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
VAMP7-203ENST00000460621 LY75O60449 1722 aa15.31■□□□□ 0.04
VAMP7-203ENST00000460621 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
VAMP7-203ENST00000460621 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
VAMP7-203ENST00000460621 ZNF784Q8NCA9 323 aaPredicted RBP15.31■□□□□ 0.04
VAMP7-203ENST00000460621 EMILIN1Q9Y6C2 1016 aa15.31■□□□□ 0.04
VAMP7-203ENST00000460621 INSRP06213 1382 aa15.31■□□□□ 0.04
VAMP7-203ENST00000460621 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
VAMP7-203ENST00000460621 CYP27B1O15528 508 aa15.3■□□□□ 0.04
VAMP7-203ENST00000460621 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
VAMP7-203ENST00000460621 QSER1Q2KHR3 1735 aa15.29■□□□□ 0.04
VAMP7-203ENST00000460621 COL23A1Q86Y22 540 aaPredicted RBP15.29■□□□□ 0.04
VAMP7-203ENST00000460621 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
VAMP7-203ENST00000460621 TFCP2L1Q9NZI6 479 aa15.29■□□□□ 0.04
VAMP7-203ENST00000460621 CCNL1Q9UK58 526 aaPredicted RBP15.29■□□□□ 0.04
VAMP7-203ENST00000460621 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
VAMP7-203ENST00000460621 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
VAMP7-203ENST00000460621 NSD3Q9BZ95 1437 aa15.27■□□□□ 0.04
VAMP7-203ENST00000460621 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
VAMP7-203ENST00000460621 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.03
VAMP7-203ENST00000460621 FLT4P35916 1363 aa15.26■□□□□ 0.03
VAMP7-203ENST00000460621 CGNL1Q0VF96 1302 aa15.26■□□□□ 0.03
VAMP7-203ENST00000460621 TATP17735 454 aaPredicted RBP15.26■□□□□ 0.03
VAMP7-203ENST00000460621 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
VAMP7-203ENST00000460621 TOGARAM1Q9Y4F4 1720 aa15.25■□□□□ 0.03
VAMP7-203ENST00000460621 NCAPD2Q15021 1401 aa15.25■□□□□ 0.03
VAMP7-203ENST00000460621 MPRIPQ6WCQ1 1025 aa15.24■□□□□ 0.03
VAMP7-203ENST00000460621 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
VAMP7-203ENST00000460621 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
VAMP7-203ENST00000460621 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
VAMP7-203ENST00000460621 PIGBQ92521 554 aa15.23■□□□□ 0.03
VAMP7-203ENST00000460621 EYA1Q99502 592 aa15.23■□□□□ 0.03
VAMP7-203ENST00000460621 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
VAMP7-203ENST00000460621 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
VAMP7-203ENST00000460621 PCDH11XQ9BZA7 1347 aa15.22■□□□□ 0.03
VAMP7-203ENST00000460621 PCDH11YQ9BZA8 1340 aa15.22■□□□□ 0.03
VAMP7-203ENST00000460621 YBX3P16989 372 aaKnown RBP eCLIP15.22■□□□□ 0.036e-10■□□□□ 9.8
VAMP7-203ENST00000460621 POLD1P28340 1107 aa15.22■□□□□ 0.03
VAMP7-203ENST00000460621 GPR162Q16538 588 aa15.22■□□□□ 0.03
VAMP7-203ENST00000460621 CDCA8Q53HL2 280 aa15.22■□□□□ 0.03
VAMP7-203ENST00000460621 SMG6Q86US8 1419 aaKnown RBP15.22■□□□□ 0.03
VAMP7-203ENST00000460621 PALLDQ8WX93 1383 aa15.22■□□□□ 0.03
VAMP7-203ENST00000460621 CHD4Q14839 1912 aa15.21■□□□□ 0.03
VAMP7-203ENST00000460621 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
VAMP7-203ENST00000460621 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.03
VAMP7-203ENST00000460621 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
VAMP7-203ENST00000460621 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
VAMP7-203ENST00000460621 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
VAMP7-203ENST00000460621 ITGB4P16144 1822 aa15.2■□□□□ 0.02
VAMP7-203ENST00000460621 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
VAMP7-203ENST00000460621 C5P01031 1676 aa15.19■□□□□ 0.02
VAMP7-203ENST00000460621 MSH5O43196 834 aa15.19■□□□□ 0.02
VAMP7-203ENST00000460621 MAP2P11137 1827 aaKnown RBP15.18■□□□□ 0.02
VAMP7-203ENST00000460621 PELP1Q8IZL8 1130 aaKnown RBP15.18■□□□□ 0.02
VAMP7-203ENST00000460621 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
VAMP7-203ENST00000460621 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
VAMP7-203ENST00000460621 ITPK1Q13572 414 aa15.17■□□□□ 0.02
VAMP7-203ENST00000460621 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
VAMP7-203ENST00000460621 LINC00116Q8NCU8 138 aa15.17■□□□□ 0.02
VAMP7-203ENST00000460621 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
VAMP7-203ENST00000460621 ASAP1Q9ULH1 1129 aa15.17■□□□□ 0.02
VAMP7-203ENST00000460621 POLR3GLQ9BT43 218 aa15.16■□□□□ 0.02
VAMP7-203ENST00000460621 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
VAMP7-203ENST00000460621 PHKG2P15735 406 aa15.15■□□□□ 0.02
VAMP7-203ENST00000460621 LOC102724428A0A0B4J2F2 783 aa15.14■□□□□ 0.01
VAMP7-203ENST00000460621 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
VAMP7-203ENST00000460621 SIK1P57059 783 aa15.14■□□□□ 0.01
VAMP7-203ENST00000460621 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
VAMP7-203ENST00000460621 SLC4A9Q96Q91 983 aa15.14■□□□□ 0.01
VAMP7-203ENST00000460621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.14■□□□□ 0.01
VAMP7-203ENST00000460621 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
VAMP7-203ENST00000460621 UBR3Q6ZT12 1888 aa15.14■□□□□ 0.01
VAMP7-203ENST00000460621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
VAMP7-203ENST00000460621 PHF14O94880 888 aa15.13■□□□□ 0.01
VAMP7-203ENST00000460621 C1QTNF8P60827 252 aa15.13■□□□□ 0.01
VAMP7-203ENST00000460621 PANK3Q9H999 370 aa15.13■□□□□ 0.01
VAMP7-203ENST00000460621 ATG3Q9NT62 314 aa15.13■□□□□ 0.01
VAMP7-203ENST00000460621 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
VAMP7-203ENST00000460621 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
VAMP7-203ENST00000460621 AK7Q96M32 723 aa15.11■□□□□ 0.01
VAMP7-203ENST00000460621 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
VAMP7-203ENST00000460621 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
VAMP7-203ENST00000460621 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
VAMP7-203ENST00000460621 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
VAMP7-203ENST00000460621 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
VAMP7-203ENST00000460621 ATP6V1AP38606 617 aa15.09■□□□□ 0.01
VAMP7-203ENST00000460621 AEBP1Q8IUX7 1158 aa15.09■□□□□ 0.01
VAMP7-203ENST00000460621 KDRP35968 1356 aa15.08■□□□□ 0
VAMP7-203ENST00000460621 KDM6AO15550 1401 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms