RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 RGPD1P0DJD0 1748 aa15.8■□□□□ 0.12
HMGN2-202ENST00000460563 TNS1Q9HBL0 1735 aaKnown RBP15.8■□□□□ 0.12
HMGN2-202ENST00000460563 ONECUT3O60422 494 aaPredicted RBP15.8■□□□□ 0.12
HMGN2-202ENST00000460563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.79■□□□□ 0.125e-39■□□□□ 10.8
HMGN2-202ENST00000460563 NRKQ7Z2Y5 1582 aa15.79■□□□□ 0.12
HMGN2-202ENST00000460563 PDIA6Q15084 440 aa15.78■□□□□ 0.12
HMGN2-202ENST00000460563 OXER1Q8TDS5 423 aa15.78■□□□□ 0.12
HMGN2-202ENST00000460563 NUDT16Q96DE0 195 aaKnown RBP15.78■□□□□ 0.12
HMGN2-202ENST00000460563 QRICH2Q9H0J4 1663 aa15.77■□□□□ 0.12
HMGN2-202ENST00000460563 FAM182BQ5T319 152 aa15.77■□□□□ 0.12
HMGN2-202ENST00000460563 KIAA0232Q92628 1395 aa15.76■□□□□ 0.11
HMGN2-202ENST00000460563 HRCP23327 699 aa15.76■□□□□ 0.11
HMGN2-202ENST00000460563 SF3B2Q13435 895 aaKnown RBP15.76■□□□□ 0.11
HMGN2-202ENST00000460563 NUTM2GQ5VZR2 741 aa15.76■□□□□ 0.11
HMGN2-202ENST00000460563 SPATA31A5Q5VU36 1347 aa15.75■□□□□ 0.11
HMGN2-202ENST00000460563 SPATA31A7Q8IWB4 1347 aa15.75■□□□□ 0.11
HMGN2-202ENST00000460563 CHRNA2Q15822 529 aa15.75■□□□□ 0.11
HMGN2-202ENST00000460563 STAC3Q96MF2 364 aa15.75■□□□□ 0.11
HMGN2-202ENST00000460563 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
HMGN2-202ENST00000460563 PRDM11Q9NQV5 511 aa15.75■□□□□ 0.11
HMGN2-202ENST00000460563 MLLT3P42568 568 aaPredicted RBP15.74■□□□□ 0.11
HMGN2-202ENST00000460563 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
HMGN2-202ENST00000460563 LRP5O75197 1615 aa15.74■□□□□ 0.11
HMGN2-202ENST00000460563 POLR3AO14802 1390 aaPredicted RBP15.74■□□□□ 0.11
HMGN2-202ENST00000460563 LMO7Q8WWI1 1683 aa15.73■□□□□ 0.11
HMGN2-202ENST00000460563 ACEP12821 1306 aa15.73■□□□□ 0.11
HMGN2-202ENST00000460563 SPDYE16A6NNV3 312 aaPredicted RBP15.72■□□□□ 0.11
HMGN2-202ENST00000460563 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
HMGN2-202ENST00000460563 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
HMGN2-202ENST00000460563 MAP3K9P80192 1104 aa15.71■□□□□ 0.11
HMGN2-202ENST00000460563 STRN4Q9NRL3 753 aa15.71■□□□□ 0.11
HMGN2-202ENST00000460563 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
HMGN2-202ENST00000460563 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
HMGN2-202ENST00000460563 BAG6P46379 1132 aa15.7■□□□□ 0.1
HMGN2-202ENST00000460563 PTCD2Q8WV60 388 aaKnown RBP15.7■□□□□ 0.1
HMGN2-202ENST00000460563 PPIP5K1Q6PFW1 1433 aa15.69■□□□□ 0.1
HMGN2-202ENST00000460563 TRPM1Q7Z4N2 1603 aa15.69■□□□□ 0.1
HMGN2-202ENST00000460563 SLC34A2O95436 690 aa15.69■□□□□ 0.1
HMGN2-202ENST00000460563 EN1Q05925 392 aaPredicted RBP15.69■□□□□ 0.1
HMGN2-202ENST00000460563 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
HMGN2-202ENST00000460563 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
HMGN2-202ENST00000460563 PLEKHG3A1L390 1219 aa15.67■□□□□ 0.1
HMGN2-202ENST00000460563 USP35Q9P2H5 1018 aa15.67■□□□□ 0.1
HMGN2-202ENST00000460563 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
HMGN2-202ENST00000460563 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
HMGN2-202ENST00000460563 RREB1Q92766 1687 aa15.67■□□□□ 0.1
HMGN2-202ENST00000460563 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
HMGN2-202ENST00000460563 SLAIN1Q8ND83 568 aa15.66■□□□□ 0.1
HMGN2-202ENST00000460563 SCUBE2Q9NQ36 999 aa15.66■□□□□ 0.1
HMGN2-202ENST00000460563 DISP2A7MBM2 1401 aa15.66■□□□□ 0.1
HMGN2-202ENST00000460563 USP19O94966 1318 aa15.66■□□□□ 0.1
HMGN2-202ENST00000460563 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
HMGN2-202ENST00000460563 PARP4Q9UKK3 1724 aaKnown RBP15.65■□□□□ 0.1
HMGN2-202ENST00000460563 TULP1O00294 542 aaPredicted RBP15.65■□□□□ 0.1
HMGN2-202ENST00000460563 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
HMGN2-202ENST00000460563 WNK3Q9BYP7 1800 aa15.65■□□□□ 0.1
HMGN2-202ENST00000460563 AKAP12Q02952 1782 aa15.64■□□□□ 0.1
HMGN2-202ENST00000460563 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
HMGN2-202ENST00000460563 RGPD5Q99666 1765 aa15.64■□□□□ 0.09
HMGN2-202ENST00000460563 CPDO75976 1380 aa15.63■□□□□ 0.09
HMGN2-202ENST00000460563 TRIM37O94972 964 aa15.63■□□□□ 0.09
HMGN2-202ENST00000460563 EZH2Q15910 746 aaKnown RBP15.63■□□□□ 0.09
HMGN2-202ENST00000460563 MAMSTRQ6ZN01 415 aa15.63■□□□□ 0.09
HMGN2-202ENST00000460563 COL5A2P05997 1499 aaPredicted RBP15.63■□□□□ 0.09
HMGN2-202ENST00000460563 SLIT3O75094 1523 aa15.63■□□□□ 0.09
HMGN2-202ENST00000460563 COL18A1P39060 1754 aa15.62■□□□□ 0.09
HMGN2-202ENST00000460563 USP6P35125 1406 aa15.62■□□□□ 0.09
HMGN2-202ENST00000460563 LRRC37A3O60309 1634 aa15.62■□□□□ 0.09
HMGN2-202ENST00000460563 EVA1CP58658 441 aa15.62■□□□□ 0.09
HMGN2-202ENST00000460563 SMYD5Q6GMV2 418 aa15.62■□□□□ 0.09
HMGN2-202ENST00000460563 EVI5O60447 810 aa15.61■□□□□ 0.09
HMGN2-202ENST00000460563 R3HDM1Q15032 1099 aaKnown RBP15.61■□□□□ 0.09
HMGN2-202ENST00000460563 L3MBTL2Q969R5 705 aa15.61■□□□□ 0.09
HMGN2-202ENST00000460563 SBF2Q86WG5 1849 aa15.61■□□□□ 0.09
HMGN2-202ENST00000460563 PEAK1Q9H792 1746 aa15.6■□□□□ 0.09
HMGN2-202ENST00000460563 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
HMGN2-202ENST00000460563 SIN3AQ96ST3 1273 aa15.6■□□□□ 0.09
HMGN2-202ENST00000460563 GCP02774 474 aa15.59■□□□□ 0.09
HMGN2-202ENST00000460563 HOXB3P14651 431 aaPredicted RBP15.59■□□□□ 0.09
HMGN2-202ENST00000460563 FAM196AQ6ZSG2 479 aa15.59■□□□□ 0.09
HMGN2-202ENST00000460563 BARGINQ6ZT62 677 aa15.59■□□□□ 0.09
HMGN2-202ENST00000460563 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
HMGN2-202ENST00000460563 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
HMGN2-202ENST00000460563 TBC1D12O60347 775 aa15.58■□□□□ 0.08
HMGN2-202ENST00000460563 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
HMGN2-202ENST00000460563 TCP11L2Q8N4U5 519 aa15.58■□□□□ 0.08
HMGN2-202ENST00000460563 CAMKK2Q96RR4 588 aa15.58■□□□□ 0.08
HMGN2-202ENST00000460563 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
HMGN2-202ENST00000460563 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
HMGN2-202ENST00000460563 APBA3O96018 575 aa15.56■□□□□ 0.08
HMGN2-202ENST00000460563 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
HMGN2-202ENST00000460563 CRB1P82279 1406 aa15.56■□□□□ 0.08
HMGN2-202ENST00000460563 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
HMGN2-202ENST00000460563 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
HMGN2-202ENST00000460563 PTGER2P43116 358 aa15.55■□□□□ 0.08
HMGN2-202ENST00000460563 GRXCR2A6NFK2 248 aa15.54■□□□□ 0.08
HMGN2-202ENST00000460563 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
HMGN2-202ENST00000460563 ZC3H15Q8WU90 426 aaKnown RBP15.54■□□□□ 0.08
HMGN2-202ENST00000460563 DDX12PQ92771 950 aa15.54■□□□□ 0.08
HMGN2-202ENST00000460563 OTUD5Q96G74 571 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms