RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 PLEKHF1Q96S99 279 aa14.12□□□□□ -0.15
CDHR4-203ENST00000460430 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
CDHR4-203ENST00000460430 APAF1O14727 1248 aa14.11□□□□□ -0.15
CDHR4-203ENST00000460430 PLEKHO1Q53GL0 409 aaPredicted RBP14.11□□□□□ -0.15
CDHR4-203ENST00000460430 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
CDHR4-203ENST00000460430 CDCA7Q9BWT1 371 aaPredicted RBP14.11□□□□□ -0.15
CDHR4-203ENST00000460430 DISP2A7MBM2 1401 aa14.1□□□□□ -0.15
CDHR4-203ENST00000460430 AMOTQ4VCS5 1084 aa14.1□□□□□ -0.15
CDHR4-203ENST00000460430 PHACTR3Q96KR7 559 aa14.1□□□□□ -0.15
CDHR4-203ENST00000460430 QTRT2Q9H974 415 aaKnown RBP14.1□□□□□ -0.15
CDHR4-203ENST00000460430 SPG7Q9UQ90 795 aa14.1□□□□□ -0.15
CDHR4-203ENST00000460430 PKD1L3Q7Z443 1732 aa14.1□□□□□ -0.15
CDHR4-203ENST00000460430 GLI3P10071 1580 aa14.09□□□□□ -0.15
CDHR4-203ENST00000460430 TNS2Q63HR2 1409 aa14.09□□□□□ -0.15
CDHR4-203ENST00000460430 NEUROD2Q15784 382 aa14.09□□□□□ -0.15
CDHR4-203ENST00000460430 NFE2L2Q16236 605 aa14.09□□□□□ -0.15
CDHR4-203ENST00000460430 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
CDHR4-203ENST00000460430 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
CDHR4-203ENST00000460430 BARGINQ6ZT62 677 aa14.09□□□□□ -0.15
CDHR4-203ENST00000460430 GJD4Q96KN9 370 aaPredicted RBP14.09□□□□□ -0.15
CDHR4-203ENST00000460430 RRP7AQ9Y3A4 280 aaKnown RBP14.09□□□□□ -0.15
CDHR4-203ENST00000460430 LRRC37A3O60309 1634 aa14.08□□□□□ -0.15
CDHR4-203ENST00000460430 LMOD3Q0VAK6 560 aa14.08□□□□□ -0.16
CDHR4-203ENST00000460430 MTHFSDQ2M296 383 aaKnown RBP14.08□□□□□ -0.16
CDHR4-203ENST00000460430 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
CDHR4-203ENST00000460430 SALL2Q9Y467 1007 aaPredicted RBP14.08□□□□□ -0.16
CDHR4-203ENST00000460430 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
CDHR4-203ENST00000460430 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
CDHR4-203ENST00000460430 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
CDHR4-203ENST00000460430 RIPK4P57078 832 aa14.07□□□□□ -0.16
CDHR4-203ENST00000460430 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
CDHR4-203ENST00000460430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDHR4-203ENST00000460430 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
CDHR4-203ENST00000460430 DDB1Q16531 1140 aa14.06□□□□□ -0.16
CDHR4-203ENST00000460430 THSD7AQ9UPZ6 1657 aa14.06□□□□□ -0.16
CDHR4-203ENST00000460430 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
CDHR4-203ENST00000460430 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
CDHR4-203ENST00000460430 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
CDHR4-203ENST00000460430 EXOC5O00471 708 aa14.04□□□□□ -0.16
CDHR4-203ENST00000460430 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
CDHR4-203ENST00000460430 AKAP4Q5JQC9 854 aa14.04□□□□□ -0.16
CDHR4-203ENST00000460430 IFNL2Q8IZJ0 200 aa14.04□□□□□ -0.16
CDHR4-203ENST00000460430 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
CDHR4-203ENST00000460430 PHKG2P15735 406 aa14.03□□□□□ -0.16
CDHR4-203ENST00000460430 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
CDHR4-203ENST00000460430 ZBED9Q6R2W3 1325 aa14.03□□□□□ -0.16
CDHR4-203ENST00000460430 DLG5Q8TDM6 1919 aa14.02□□□□□ -0.16
CDHR4-203ENST00000460430 HSP90AB1P08238 724 aaKnown RBP14.02□□□□□ -0.17
CDHR4-203ENST00000460430 RXRBP28702 533 aa14.02□□□□□ -0.17
CDHR4-203ENST00000460430 CYP27B1O15528 508 aa14.01□□□□□ -0.17
CDHR4-203ENST00000460430 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
CDHR4-203ENST00000460430 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
CDHR4-203ENST00000460430 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
CDHR4-203ENST00000460430 SEPT12Q8IYM1 358 aa14.01□□□□□ -0.17
CDHR4-203ENST00000460430 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
CDHR4-203ENST00000460430 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
CDHR4-203ENST00000460430 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
CDHR4-203ENST00000460430 MCM10Q7L590 875 aa14□□□□□ -0.17
CDHR4-203ENST00000460430 WWC1Q8IX03 1113 aa14□□□□□ -0.17
CDHR4-203ENST00000460430 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
CDHR4-203ENST00000460430 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
CDHR4-203ENST00000460430 POTEAQ6S8J7 498 aa13.99□□□□□ -0.17
CDHR4-203ENST00000460430 MPRIPQ6WCQ1 1025 aa13.99□□□□□ -0.17
CDHR4-203ENST00000460430 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
CDHR4-203ENST00000460430 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
CDHR4-203ENST00000460430 THUMPD2Q9BTF0 503 aaKnown RBP13.99□□□□□ -0.17
CDHR4-203ENST00000460430 RGS12O14924 1447 aa13.98□□□□□ -0.17
CDHR4-203ENST00000460430 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
CDHR4-203ENST00000460430 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
CDHR4-203ENST00000460430 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
CDHR4-203ENST00000460430 TEFQ10587 303 aa13.97□□□□□ -0.17
CDHR4-203ENST00000460430 SCN11AQ9UI33 1791 aa13.96□□□□□ -0.17
CDHR4-203ENST00000460430 ZNF521Q96K83 1311 aa13.96□□□□□ -0.17
CDHR4-203ENST00000460430 ADAMTS7Q9UKP4 1686 aa13.96□□□□□ -0.17
CDHR4-203ENST00000460430 GOLGA2Q08379 1002 aa13.96□□□□□ -0.17
CDHR4-203ENST00000460430 WDR63Q8IWG1 891 aa13.96□□□□□ -0.17
CDHR4-203ENST00000460430 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
CDHR4-203ENST00000460430 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.18
CDHR4-203ENST00000460430 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
CDHR4-203ENST00000460430 MRC1P22897 1456 aa13.95□□□□□ -0.18
CDHR4-203ENST00000460430 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
CDHR4-203ENST00000460430 KRT27Q7Z3Y8 459 aa13.95□□□□□ -0.18
CDHR4-203ENST00000460430 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
CDHR4-203ENST00000460430 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
CDHR4-203ENST00000460430 LAS1LQ9Y4W2 734 aaKnown RBP13.95□□□□□ -0.18
CDHR4-203ENST00000460430 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
CDHR4-203ENST00000460430 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
CDHR4-203ENST00000460430 CABP4P57796 275 aa13.94□□□□□ -0.18
CDHR4-203ENST00000460430 SYTL4Q96C24 671 aaPredicted RBP13.94□□□□□ -0.18
CDHR4-203ENST00000460430 IL16Q14005 1332 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 BRWD3Q6RI45 1802 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 E9PSI1 815 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 GNAI1P63096 354 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 MYH16Q9H6N6 1097 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 SLC52A2Q9HAB3 445 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 IFT57Q9NWB7 429 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
CDHR4-203ENST00000460430 TSPYL4Q9UJ04 414 aa13.92□□□□□ -0.18
CDHR4-203ENST00000460430 FAM182BQ5T319 152 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms