RNA–Protein interactions for RNA: ENST00000460405.5

LDHA-207, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-207ENST00000460405 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
LDHA-207ENST00000460405 USHBP1Q8N6Y0 703 aa14.01□□□□□ -0.17
LDHA-207ENST00000460405 WNK3Q9BYP7 1800 aa14.01□□□□□ -0.17
LDHA-207ENST00000460405 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
LDHA-207ENST00000460405 HSPA5P11021 654 aaKnown RBP14□□□□□ -0.17
LDHA-207ENST00000460405 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
LDHA-207ENST00000460405 SLC27A3Q5K4L6 730 aa14□□□□□ -0.17
LDHA-207ENST00000460405 PDGFDQ9GZP0 370 aaPredicted RBP14□□□□□ -0.17
LDHA-207ENST00000460405 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
LDHA-207ENST00000460405 RGPD3A6NKT7 1758 aaPredicted RBP13.99□□□□□ -0.17
LDHA-207ENST00000460405 RGPD4Q7Z3J3 1758 aa13.99□□□□□ -0.17
LDHA-207ENST00000460405 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
LDHA-207ENST00000460405 MTFR1LQ9H019 292 aa13.98□□□□□ -0.17
LDHA-207ENST00000460405 LRRC4BQ9NT99 713 aa13.98□□□□□ -0.17
LDHA-207ENST00000460405 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
LDHA-207ENST00000460405 MEGF6O75095 1541 aa13.96□□□□□ -0.17
LDHA-207ENST00000460405 KAT6BQ8WYB5 2073 aa13.96□□□□□ -0.17
LDHA-207ENST00000460405 PANK3Q9H999 370 aa13.96□□□□□ -0.17
LDHA-207ENST00000460405 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
LDHA-207ENST00000460405 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
LDHA-207ENST00000460405 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
LDHA-207ENST00000460405 FAM208AQ9UK61 1670 aaKnown RBP13.95□□□□□ -0.18
LDHA-207ENST00000460405 HMGB2P26583 209 aaKnown RBP13.95□□□□□ -0.18
LDHA-207ENST00000460405 PTGER2P43116 358 aa13.95□□□□□ -0.18
LDHA-207ENST00000460405 TNNT2P45379 298 aaPredicted RBP13.95□□□□□ -0.18
LDHA-207ENST00000460405 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
LDHA-207ENST00000460405 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
LDHA-207ENST00000460405 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
LDHA-207ENST00000460405 TFCP2L1Q9NZI6 479 aa13.94□□□□□ -0.18
LDHA-207ENST00000460405 KCNQ4P56696 695 aa13.93□□□□□ -0.18
LDHA-207ENST00000460405 SLC16A10Q8TF71 515 aa13.93□□□□□ -0.18
LDHA-207ENST00000460405 EYA1Q99502 592 aa13.93□□□□□ -0.18
LDHA-207ENST00000460405 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
LDHA-207ENST00000460405 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
LDHA-207ENST00000460405 CYP27B1O15528 508 aa13.92□□□□□ -0.18
LDHA-207ENST00000460405 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
LDHA-207ENST00000460405 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
LDHA-207ENST00000460405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
LDHA-207ENST00000460405 KNSTRNQ9Y448 316 aa13.91□□□□□ -0.18
LDHA-207ENST00000460405 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
LDHA-207ENST00000460405 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
LDHA-207ENST00000460405 ARXQ96QS3 562 aa13.9□□□□□ -0.18
LDHA-207ENST00000460405 SGIP1Q9BQI5 828 aa13.9□□□□□ -0.18
LDHA-207ENST00000460405 FHDC1Q9C0D6 1143 aaPredicted RBP13.9□□□□□ -0.18
LDHA-207ENST00000460405 NSD2O96028 1365 aa13.9□□□□□ -0.18
LDHA-207ENST00000460405 BTAF1O14981 1849 aa13.9□□□□□ -0.18
LDHA-207ENST00000460405 POLD1P28340 1107 aa13.89□□□□□ -0.19
LDHA-207ENST00000460405 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
LDHA-207ENST00000460405 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
LDHA-207ENST00000460405 KIF20BQ96Q89 1820 aa13.89□□□□□ -0.19
LDHA-207ENST00000460405 MYOM1P52179 1685 aa13.88□□□□□ -0.19
LDHA-207ENST00000460405 YY1P25490 414 aa13.88□□□□□ -0.19
LDHA-207ENST00000460405 IFNL2Q8IZJ0 200 aa13.88□□□□□ -0.19
LDHA-207ENST00000460405 CASZ1Q86V15 1759 aa13.88□□□□□ -0.19
LDHA-207ENST00000460405 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
LDHA-207ENST00000460405 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
LDHA-207ENST00000460405 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
LDHA-207ENST00000460405 PIGBQ92521 554 aa13.86□□□□□ -0.19
LDHA-207ENST00000460405 NCAPD2Q15021 1401 aa13.86□□□□□ -0.19
LDHA-207ENST00000460405 PALLDQ8WX93 1383 aa13.85□□□□□ -0.19
LDHA-207ENST00000460405 PHKG2P15735 406 aa13.85□□□□□ -0.19
LDHA-207ENST00000460405 TMOD3Q9NYL9 352 aa13.85□□□□□ -0.19
LDHA-207ENST00000460405 PAPPAQ13219 1627 aa13.84□□□□□ -0.19
LDHA-207ENST00000460405 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
LDHA-207ENST00000460405 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
LDHA-207ENST00000460405 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
LDHA-207ENST00000460405 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
LDHA-207ENST00000460405 IGSF1Q8N6C5 1336 aa13.83□□□□□ -0.2
LDHA-207ENST00000460405 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
LDHA-207ENST00000460405 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
LDHA-207ENST00000460405 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
LDHA-207ENST00000460405 MAP3K5Q99683 1374 aa13.82□□□□□ -0.2
LDHA-207ENST00000460405 DOT1LQ8TEK3 1739 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 SIK1P57059 783 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
LDHA-207ENST00000460405 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 AK7Q96M32 723 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 SHANK3Q9BYB0 1731 aa13.81□□□□□ -0.2
LDHA-207ENST00000460405 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
LDHA-207ENST00000460405 GPR162Q16538 588 aa13.8□□□□□ -0.2
LDHA-207ENST00000460405 ATP6V1AP38606 617 aa13.79□□□□□ -0.2
LDHA-207ENST00000460405 SULT6B1Q6IMI4 303 aa13.79□□□□□ -0.2
LDHA-207ENST00000460405 ZNF530Q6P9A1 599 aaPredicted RBP13.79□□□□□ -0.2
LDHA-207ENST00000460405 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
LDHA-207ENST00000460405 MTHFSP49914 203 aa13.78□□□□□ -0.2
LDHA-207ENST00000460405 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
LDHA-207ENST00000460405 MSL1Q68DK7 614 aa13.78□□□□□ -0.2
LDHA-207ENST00000460405 ATG3Q9NT62 314 aa13.78□□□□□ -0.2
LDHA-207ENST00000460405 LY75O60449 1722 aa13.78□□□□□ -0.2
LDHA-207ENST00000460405 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
LDHA-207ENST00000460405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
LDHA-207ENST00000460405 IL13P35225 146 aa13.77□□□□□ -0.21
LDHA-207ENST00000460405 CABP4P57796 275 aa13.77□□□□□ -0.21
LDHA-207ENST00000460405 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.21
LDHA-207ENST00000460405 PHF14O94880 888 aa13.76□□□□□ -0.21
LDHA-207ENST00000460405 SSFA2P28290 1259 aa13.76□□□□□ -0.21
LDHA-207ENST00000460405 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms