RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 IL2RBP14784 551 aa12.89□□□□□ -0.35
TNC-204ENST00000460345 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 VPS72Q15906 364 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
TNC-204ENST00000460345 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
TNC-204ENST00000460345 WWC1Q8IX03 1113 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 BCL9LQ86UU0 1499 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
TNC-204ENST00000460345 CCDC27Q2M243 656 aa12.87□□□□□ -0.35
TNC-204ENST00000460345 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
TNC-204ENST00000460345 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
TNC-204ENST00000460345 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
TNC-204ENST00000460345 MEGF6O75095 1541 aa12.87□□□□□ -0.35
TNC-204ENST00000460345 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
TNC-204ENST00000460345 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
TNC-204ENST00000460345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNC-204ENST00000460345 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
TNC-204ENST00000460345 CENPBP07199 599 aaPredicted RBP12.85□□□□□ -0.35
TNC-204ENST00000460345 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
TNC-204ENST00000460345 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
TNC-204ENST00000460345 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
TNC-204ENST00000460345 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
TNC-204ENST00000460345 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
TNC-204ENST00000460345 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
TNC-204ENST00000460345 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
TNC-204ENST00000460345 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
TNC-204ENST00000460345 MCM10Q7L590 875 aa12.84□□□□□ -0.35
TNC-204ENST00000460345 WDR63Q8IWG1 891 aa12.84□□□□□ -0.35
TNC-204ENST00000460345 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
TNC-204ENST00000460345 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
TNC-204ENST00000460345 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
TNC-204ENST00000460345 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 A0A0G2JS52 829 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 EXOC5O00471 708 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 MYT1Q01538 1121 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
TNC-204ENST00000460345 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
TNC-204ENST00000460345 BARGINQ6ZT62 677 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
TNC-204ENST00000460345 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
TNC-204ENST00000460345 GJD4Q96KN9 370 aaPredicted RBP12.83□□□□□ -0.36
TNC-204ENST00000460345 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
TNC-204ENST00000460345 PHKG2P15735 406 aa12.82□□□□□ -0.36
TNC-204ENST00000460345 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
TNC-204ENST00000460345 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
TNC-204ENST00000460345 LAS1LQ9Y4W2 734 aaKnown RBP12.82□□□□□ -0.36
TNC-204ENST00000460345 PCDH11XQ9BZA7 1347 aa12.82□□□□□ -0.36
TNC-204ENST00000460345 PCDH11YQ9BZA8 1340 aa12.82□□□□□ -0.36
TNC-204ENST00000460345 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.82□□□□□ -0.36
TNC-204ENST00000460345 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
TNC-204ENST00000460345 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
TNC-204ENST00000460345 ATRNO75882 1429 aa12.81□□□□□ -0.36
TNC-204ENST00000460345 E9PSI1 815 aa12.81□□□□□ -0.36
TNC-204ENST00000460345 CYP27B1O15528 508 aa12.81□□□□□ -0.36
TNC-204ENST00000460345 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
TNC-204ENST00000460345 DDB1Q16531 1140 aa12.81□□□□□ -0.36
TNC-204ENST00000460345 IL17REQ8NFR9 667 aa12.81□□□□□ -0.36
TNC-204ENST00000460345 RNMTO43148 476 aaKnown RBP12.8□□□□□ -0.36
TNC-204ENST00000460345 SLFN5Q08AF3 891 aa12.8□□□□□ -0.36
TNC-204ENST00000460345 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
TNC-204ENST00000460345 LGR6Q9HBX8 967 aa12.8□□□□□ -0.36
TNC-204ENST00000460345 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
TNC-204ENST00000460345 IL16Q14005 1332 aa12.8□□□□□ -0.36
TNC-204ENST00000460345 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
TNC-204ENST00000460345 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
TNC-204ENST00000460345 GNAI1P63096 354 aa12.78□□□□□ -0.36
TNC-204ENST00000460345 TEFQ10587 303 aa12.78□□□□□ -0.36
TNC-204ENST00000460345 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
TNC-204ENST00000460345 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
TNC-204ENST00000460345 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
TNC-204ENST00000460345 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
TNC-204ENST00000460345 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
TNC-204ENST00000460345 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
TNC-204ENST00000460345 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
TNC-204ENST00000460345 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
TNC-204ENST00000460345 TSR2Q969E8 191 aaKnown RBP12.76□□□□□ -0.37
TNC-204ENST00000460345 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
TNC-204ENST00000460345 GLI3P10071 1580 aa12.76□□□□□ -0.37
TNC-204ENST00000460345 ZNF853P0CG23 659 aa12.75□□□□□ -0.37
TNC-204ENST00000460345 CABP4P57796 275 aa12.75□□□□□ -0.37
TNC-204ENST00000460345 SEPT12Q8IYM1 358 aa12.75□□□□□ -0.37
TNC-204ENST00000460345 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
TNC-204ENST00000460345 CEMIPQ8WUJ3 1361 aa12.75□□□□□ -0.37
TNC-204ENST00000460345 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
TNC-204ENST00000460345 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
TNC-204ENST00000460345 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
TNC-204ENST00000460345 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
TNC-204ENST00000460345 CHL1O00533 1208 aa12.74□□□□□ -0.37
TNC-204ENST00000460345 ONECUT3O60422 494 aaPredicted RBP12.74□□□□□ -0.37
TNC-204ENST00000460345 RXRBP28702 533 aa12.74□□□□□ -0.37
TNC-204ENST00000460345 MARCH10Q8NA82 808 aaPredicted RBP12.74□□□□□ -0.37
TNC-204ENST00000460345 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
TNC-204ENST00000460345 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
TNC-204ENST00000460345 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms