RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 IGSF1Q8N6C5 1336 aa28.91■■■□□ 2.22
ABCD4-202ENST00000460308 SBF2Q86WG5 1849 aa28.9■■■□□ 2.22
ABCD4-202ENST00000460308 IL13P35225 146 aa28.9■■■□□ 2.22
ABCD4-202ENST00000460308 NCAPD2Q15021 1401 aa28.9■■■□□ 2.22
ABCD4-202ENST00000460308 TNS1Q9HBL0 1735 aaKnown RBP28.89■■■□□ 2.22
ABCD4-202ENST00000460308 DIAPH1O60610 1272 aaKnown RBP28.89■■■□□ 2.22
ABCD4-202ENST00000460308 ACSBG1Q96GR2 724 aa28.89■■■□□ 2.22
ABCD4-202ENST00000460308 SPG7Q9UQ90 795 aa28.89■■■□□ 2.22
ABCD4-202ENST00000460308 CFAP53Q96M91 514 aa28.87■■■□□ 2.21
ABCD4-202ENST00000460308 PCDH11XQ9BZA7 1347 aa28.87■■■□□ 2.21
ABCD4-202ENST00000460308 PCDH11YQ9BZA8 1340 aa28.87■■■□□ 2.21
ABCD4-202ENST00000460308 PPP2R1AP30153 589 aa28.86■■■□□ 2.21
ABCD4-202ENST00000460308 SULT6B1Q6IMI4 303 aa28.85■■■□□ 2.21
ABCD4-202ENST00000460308 KCNQ2O43526 872 aa28.84■■■□□ 2.21
ABCD4-202ENST00000460308 EZH2Q15910 746 aaKnown RBP28.84■■■□□ 2.21
ABCD4-202ENST00000460308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.84■■■□□ 2.21
ABCD4-202ENST00000460308 PTF1AQ7RTS3 328 aa28.83■■■□□ 2.21
ABCD4-202ENST00000460308 CAMKK2Q96RR4 588 aa28.83■■■□□ 2.21
ABCD4-202ENST00000460308 SHANK3Q9BYB0 1731 aa28.82■■■□□ 2.2
ABCD4-202ENST00000460308 AEBP1Q8IUX7 1158 aa28.81■■■□□ 2.2
ABCD4-202ENST00000460308 SYTL4Q96C24 671 aaPredicted RBP28.81■■■□□ 2.2
ABCD4-202ENST00000460308 PARD3Q8TEW0 1356 aa28.8■■■□□ 2.2
ABCD4-202ENST00000460308 ZNF316A6NFI3 1004 aaPredicted RBP28.8■■■□□ 2.2
ABCD4-202ENST00000460308 CYP27B1O15528 508 aa28.8■■■□□ 2.2
ABCD4-202ENST00000460308 PLEKHO1Q53GL0 409 aaPredicted RBP28.8■■■□□ 2.2
ABCD4-202ENST00000460308 PLSCR1O15162 318 aa28.79■■■□□ 2.2
ABCD4-202ENST00000460308 U2SURPO15042 1029 aaKnown RBP28.78■■■□□ 2.2
ABCD4-202ENST00000460308 PKD1L3Q7Z443 1732 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 PLEKHG2Q9H7P9 1386 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 NHSQ6T4R5 1651 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 HMOX1P09601 288 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 PRIM1P49642 420 aaKnown RBP28.77■■■□□ 2.2
ABCD4-202ENST00000460308 RALBP1Q15311 655 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 AMOTQ4VCS5 1084 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 IFNL2Q8IZJ0 200 aa28.77■■■□□ 2.2
ABCD4-202ENST00000460308 NUDCQ9Y266 331 aa28.76■■■□□ 2.19
ABCD4-202ENST00000460308 KDRP35968 1356 aa28.75■■■□□ 2.19
ABCD4-202ENST00000460308 COL3A1P02461 1466 aaPredicted RBP28.73■■■□□ 2.19
ABCD4-202ENST00000460308 PHKG2P15735 406 aa28.72■■■□□ 2.19
ABCD4-202ENST00000460308 NKX1-1Q15270 411 aaPredicted RBP28.72■■■□□ 2.19
ABCD4-202ENST00000460308 DOT1LQ8TEK3 1739 aa28.72■■■□□ 2.19
ABCD4-202ENST00000460308 ZNF530Q6P9A1 599 aaPredicted RBP28.71■■■□□ 2.19
ABCD4-202ENST00000460308 BTAF1O14981 1849 aa28.69■■■□□ 2.18
ABCD4-202ENST00000460308 HSP90AB1P08238 724 aaKnown RBP28.69■■■□□ 2.18
ABCD4-202ENST00000460308 C1orf141Q5JVX7 400 aa28.69■■■□□ 2.18
ABCD4-202ENST00000460308 NBPF14Q5TI25 921 aa28.68■■■□□ 2.18
ABCD4-202ENST00000460308 TXNRD1Q16881 649 aa28.67■■■□□ 2.18
ABCD4-202ENST00000460308 MPRIPQ6WCQ1 1025 aa28.67■■■□□ 2.18
ABCD4-202ENST00000460308 RGPD3A6NKT7 1758 aaPredicted RBP28.67■■■□□ 2.18
ABCD4-202ENST00000460308 RGPD4Q7Z3J3 1758 aa28.67■■■□□ 2.18
ABCD4-202ENST00000460308 U2AF1L5P0DN76 240 aaPredicted RBP28.65■■■□□ 2.18
ABCD4-202ENST00000460308 U2AF1Q01081 240 aaKnown RBP eCLIP28.65■■■□□ 2.18
ABCD4-202ENST00000460308 PROM2Q8N271 834 aa28.64■■■□□ 2.18
ABCD4-202ENST00000460308 DCAF5Q96JK2 942 aa28.64■■■□□ 2.18
ABCD4-202ENST00000460308 RREB1Q92766 1687 aa28.64■■■□□ 2.17
ABCD4-202ENST00000460308 TMOD3Q9NYL9 352 aa28.62■■■□□ 2.17
ABCD4-202ENST00000460308 MYBBP1AQ9BQG0 1328 aaKnown RBP28.62■■■□□ 2.17
ABCD4-202ENST00000460308 NUP188Q5SRE5 1749 aa28.6■■■□□ 2.17
ABCD4-202ENST00000460308 PSDA5PKW4 1024 aaPredicted RBP28.6■■■□□ 2.17
ABCD4-202ENST00000460308 AKAP4Q5JQC9 854 aa28.6■■■□□ 2.17
ABCD4-202ENST00000460308 ITGB4P16144 1822 aa28.59■■■□□ 2.17
ABCD4-202ENST00000460308 R3HDM1Q15032 1099 aaKnown RBP28.59■■■□□ 2.17
ABCD4-202ENST00000460308 PRKRIP1Q9H875 184 aaPredicted RBP28.59■■■□□ 2.17
ABCD4-202ENST00000460308 TOGARAM1Q9Y4F4 1720 aa28.58■■■□□ 2.17
ABCD4-202ENST00000460308 ERVV-2B6SEH9 535 aa28.58■■■□□ 2.17
ABCD4-202ENST00000460308 PRKAR2BP31323 418 aa28.58■■■□□ 2.17
ABCD4-202ENST00000460308 MTHFSDQ2M296 383 aaKnown RBP28.58■■■□□ 2.17
ABCD4-202ENST00000460308 PIGBQ92521 554 aa28.58■■■□□ 2.17
ABCD4-202ENST00000460308 FCHSD2O94868 740 aa28.57■■■□□ 2.16
ABCD4-202ENST00000460308 SMARCC1Q92922 1105 aaPredicted RBP28.57■■■□□ 2.16
ABCD4-202ENST00000460308 RSPH6AQ9H0K4 717 aa28.57■■■□□ 2.16
ABCD4-202ENST00000460308 CABP4P57796 275 aa28.56■■■□□ 2.16
ABCD4-202ENST00000460308 SLC27A3Q5K4L6 730 aa28.56■■■□□ 2.16
ABCD4-202ENST00000460308 GAS2L2Q8NHY3 880 aa28.56■■■□□ 2.16
ABCD4-202ENST00000460308 STK32BQ9NY57 414 aa28.54■■■□□ 2.16
ABCD4-202ENST00000460308 NEFMP07197 916 aa28.53■■■□□ 2.16
ABCD4-202ENST00000460308 CCNL1Q9UK58 526 aaPredicted RBP28.53■■■□□ 2.16
ABCD4-202ENST00000460308 KDM6AO15550 1401 aaPredicted RBP28.52■■■□□ 2.16
ABCD4-202ENST00000460308 PALLDQ8WX93 1383 aa28.51■■■□□ 2.16
ABCD4-202ENST00000460308 LRRC4BQ9NT99 713 aa28.51■■■□□ 2.15
ABCD4-202ENST00000460308 HMGB2P26583 209 aaKnown RBP28.5■■■□□ 2.15
ABCD4-202ENST00000460308 PHACTR3Q96KR7 559 aa28.5■■■□□ 2.15
ABCD4-202ENST00000460308 PNNQ9H307 717 aaKnown RBP28.5■■■□□ 2.15
ABCD4-202ENST00000460308 KCNQ4P56696 695 aa28.49■■■□□ 2.15
ABCD4-202ENST00000460308 LGR6Q9HBX8 967 aa28.49■■■□□ 2.15
ABCD4-202ENST00000460308 ANO8Q9HCE9 1232 aaPredicted RBP28.49■■■□□ 2.15
ABCD4-202ENST00000460308 RNMTO43148 476 aaKnown RBP28.48■■■□□ 2.15
ABCD4-202ENST00000460308 SLC15A2Q16348 729 aa28.48■■■□□ 2.15
ABCD4-202ENST00000460308 NFATC2IPQ8NCF5 419 aa28.48■■■□□ 2.15
ABCD4-202ENST00000460308 ASAP1Q9ULH1 1129 aa28.48■■■□□ 2.15
ABCD4-202ENST00000460308 LY75O60449 1722 aa28.48■■■□□ 2.15
ABCD4-202ENST00000460308 GNAT3A8MTJ3 354 aa28.47■■■□□ 2.15
ABCD4-202ENST00000460308 ATG3Q9NT62 314 aa28.46■■■□□ 2.15
ABCD4-202ENST00000460308 SCN11AQ9UI33 1791 aa28.46■■■□□ 2.15
ABCD4-202ENST00000460308 ANP32CO43423 234 aa28.45■■■□□ 2.14
ABCD4-202ENST00000460308 MAP3K5Q99683 1374 aa28.45■■■□□ 2.14
ABCD4-202ENST00000460308 SLC52A2Q9HAB3 445 aa28.44■■■□□ 2.14
ABCD4-202ENST00000460308 WDR43Q15061 677 aaKnown RBP eCLIP28.43■■■□□ 2.14
ABCD4-202ENST00000460308 LOC102724428A0A0B4J2F2 783 aa28.42■■■□□ 2.14
ABCD4-202ENST00000460308 SIK1P57059 783 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms