RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 CRB1P82279 1406 aa28.91■■■□□ 2.22
LCNL1-203ENST00000460177 CHRNA2Q15822 529 aa28.9■■■□□ 2.22
LCNL1-203ENST00000460177 MAP3K5Q99683 1374 aa28.9■■■□□ 2.22
LCNL1-203ENST00000460177 MBIPQ9NS73 344 aa28.89■■■□□ 2.22
LCNL1-203ENST00000460177 COL22A1Q8NFW1 1626 aaPredicted RBP28.89■■■□□ 2.22
LCNL1-203ENST00000460177 C20orf194Q5TEA3 1177 aa28.89■■■□□ 2.21
LCNL1-203ENST00000460177 EXOC6Q8TAG9 804 aa28.89■■■□□ 2.21
LCNL1-203ENST00000460177 HTATSF1O43719 755 aaKnown RBP28.88■■■□□ 2.21
LCNL1-203ENST00000460177 RTF1Q92541 710 aaKnown RBP28.87■■■□□ 2.21
LCNL1-203ENST00000460177 PHLPP1O60346 1717 aa28.86■■■□□ 2.21
LCNL1-203ENST00000460177 VIRMAQ69YN4 1812 aaKnown RBP28.85■■■□□ 2.21
LCNL1-203ENST00000460177 GNAT3A8MTJ3 354 aa28.85■■■□□ 2.21
LCNL1-203ENST00000460177 CRBNQ96SW2 442 aa28.85■■■□□ 2.21
LCNL1-203ENST00000460177 COL16A1Q07092 1604 aaPredicted RBP28.85■■■□□ 2.21
LCNL1-203ENST00000460177 PRDM11Q9NQV5 511 aa28.83■■■□□ 2.21
LCNL1-203ENST00000460177 HAP1P54257 671 aaPredicted RBP28.83■■■□□ 2.21
LCNL1-203ENST00000460177 BCL2L13Q9BXK5 485 aa28.83■■■□□ 2.21
LCNL1-203ENST00000460177 CHL1O00533 1208 aa28.82■■■□□ 2.2
LCNL1-203ENST00000460177 COL5A2P05997 1499 aaPredicted RBP28.81■■■□□ 2.2
LCNL1-203ENST00000460177 B4GALNT3Q6L9W6 998 aa28.8■■■□□ 2.2
LCNL1-203ENST00000460177 NLRP2Q9NX02 1062 aa28.8■■■□□ 2.2
LCNL1-203ENST00000460177 PLEKHO1Q53GL0 409 aaPredicted RBP28.8■■■□□ 2.2
LCNL1-203ENST00000460177 CSB-PGBD3P0DP91 1061 aa28.79■■■□□ 2.2
LCNL1-203ENST00000460177 AMOTQ4VCS5 1084 aa28.79■■■□□ 2.2
LCNL1-203ENST00000460177 SSH1Q8WYL5 1049 aa28.78■■■□□ 2.2
LCNL1-203ENST00000460177 PKD1L3Q7Z443 1732 aa28.78■■■□□ 2.2
LCNL1-203ENST00000460177 MEGF6O75095 1541 aa28.78■■■□□ 2.2
LCNL1-203ENST00000460177 CANXP27824 592 aaKnown RBP28.77■■■□□ 2.2
LCNL1-203ENST00000460177 SMC4Q9NTJ3 1288 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 TSPYL6Q8N831 410 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 IL17REQ8NFR9 667 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 ZNF428Q96B54 188 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 ADAMTS7Q9UKP4 1686 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 CEMIPQ8WUJ3 1361 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 PLEKHG2Q9H7P9 1386 aa28.77■■■□□ 2.2
LCNL1-203ENST00000460177 ZNF530Q6P9A1 599 aaPredicted RBP28.76■■■□□ 2.19
LCNL1-203ENST00000460177 FRAT1Q92837 279 aaPredicted RBP28.76■■■□□ 2.19
LCNL1-203ENST00000460177 VAMP4O75379 141 aa28.75■■■□□ 2.19
LCNL1-203ENST00000460177 PDE3AQ14432 1141 aa28.75■■■□□ 2.19
LCNL1-203ENST00000460177 ALDH1L2Q3SY69 923 aa28.75■■■□□ 2.19
LCNL1-203ENST00000460177 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
LCNL1-203ENST00000460177 PARP4Q9UKK3 1724 aaKnown RBP28.75■■■□□ 2.19
LCNL1-203ENST00000460177 AKAP4Q5JQC9 854 aa28.74■■■□□ 2.19
LCNL1-203ENST00000460177 C8orf58Q8NAV2 365 aa28.74■■■□□ 2.19
LCNL1-203ENST00000460177 WDR17Q8IZU2 1322 aa28.74■■■□□ 2.19
LCNL1-203ENST00000460177 TWISTNBQ3B726 338 aaPredicted RBP28.73■■■□□ 2.19
LCNL1-203ENST00000460177 KDM3BQ7LBC6 1761 aa28.72■■■□□ 2.19
LCNL1-203ENST00000460177 RAPGEF4Q8WZA2 1011 aa28.72■■■□□ 2.19
LCNL1-203ENST00000460177 OVOS2A0A0G2JMS6 1433 aa28.72■■■□□ 2.19
LCNL1-203ENST00000460177 CCDC136Q96JN2 1154 aa28.72■■■□□ 2.19
LCNL1-203ENST00000460177 TSPYL4Q9UJ04 414 aa28.72■■■□□ 2.19
LCNL1-203ENST00000460177 SIPA1L3O60292 1781 aaPredicted RBP28.7■■■□□ 2.19
LCNL1-203ENST00000460177 TATP17735 454 aaPredicted RBP28.7■■■□□ 2.19
LCNL1-203ENST00000460177 ELL2O00472 640 aaPredicted RBP28.69■■■□□ 2.18
LCNL1-203ENST00000460177 MIS18AQ9NYP9 233 aa28.69■■■□□ 2.18
LCNL1-203ENST00000460177 TNNQ9UQP3 1299 aa28.69■■■□□ 2.18
LCNL1-203ENST00000460177 KIF16BQ96L93 1317 aa28.69■■■□□ 2.18
LCNL1-203ENST00000460177 BRPF1P55201 1214 aaPredicted RBP28.69■■■□□ 2.18
LCNL1-203ENST00000460177 C1orf141Q5JVX7 400 aa28.69■■■□□ 2.18
LCNL1-203ENST00000460177 ZKSCAN2Q63HK3 967 aa28.69■■■□□ 2.18
LCNL1-203ENST00000460177 PANK1Q8TE04 598 aa28.69■■■□□ 2.18
LCNL1-203ENST00000460177 SCN11AQ9UI33 1791 aa28.68■■■□□ 2.18
LCNL1-203ENST00000460177 KRT24Q2M2I5 525 aa28.68■■■□□ 2.18
LCNL1-203ENST00000460177 BABAM1Q9NWV8 329 aa28.67■■■□□ 2.18
LCNL1-203ENST00000460177 LGR6Q9HBX8 967 aa28.66■■■□□ 2.18
LCNL1-203ENST00000460177 RLBP1P12271 317 aa28.66■■■□□ 2.18
LCNL1-203ENST00000460177 TAF7Q15545 349 aaPredicted RBP28.66■■■□□ 2.18
LCNL1-203ENST00000460177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.66■■■□□ 2.18
LCNL1-203ENST00000460177 PLCH1Q4KWH8 1693 aa28.65■■■□□ 2.18
LCNL1-203ENST00000460177 MRPL50Q8N5N7 158 aaKnown RBP28.65■■■□□ 2.18
LCNL1-203ENST00000460177 NOB1Q9ULX3 412 aaKnown RBP28.65■■■□□ 2.18
LCNL1-203ENST00000460177 RNMTO43148 476 aaKnown RBP28.64■■■□□ 2.18
LCNL1-203ENST00000460177 TOM1L2Q6ZVM7 507 aa28.64■■■□□ 2.18
LCNL1-203ENST00000460177 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
LCNL1-203ENST00000460177 MPRIPQ6WCQ1 1025 aa28.63■■■□□ 2.17
LCNL1-203ENST00000460177 SPG7Q9UQ90 795 aa28.63■■■□□ 2.17
LCNL1-203ENST00000460177 COG6Q9Y2V7 657 aa28.63■■■□□ 2.17
LCNL1-203ENST00000460177 TRIM27P14373 513 aa28.62■■■□□ 2.17
LCNL1-203ENST00000460177 ATF7IPQ6VMQ6 1270 aa28.62■■■□□ 2.17
LCNL1-203ENST00000460177 CARD10Q9BWT7 1032 aa28.62■■■□□ 2.17
LCNL1-203ENST00000460177 SHANK3Q9BYB0 1731 aa28.62■■■□□ 2.17
LCNL1-203ENST00000460177 STRN4Q9NRL3 753 aa28.61■■■□□ 2.17
LCNL1-203ENST00000460177 CLUAP1Q96AJ1 413 aa28.6■■■□□ 2.17
LCNL1-203ENST00000460177 KDM6AO15550 1401 aaPredicted RBP28.6■■■□□ 2.17
LCNL1-203ENST00000460177 MS4A1P11836 297 aa28.6■■■□□ 2.17
LCNL1-203ENST00000460177 HSPA1LP34931 641 aa28.6■■■□□ 2.17
LCNL1-203ENST00000460177 LARP1Q6PKG0 1096 aaKnown RBP28.6■■■□□ 2.17
LCNL1-203ENST00000460177 DZIP1LQ8IYY4 767 aaKnown RBP28.6■■■□□ 2.17
LCNL1-203ENST00000460177 NRAPQ86VF7 1730 aa28.58■■■□□ 2.17
LCNL1-203ENST00000460177 TCERG1O14776 1098 aaKnown RBP28.58■■■□□ 2.17
LCNL1-203ENST00000460177 IPO8O15397 1037 aaKnown RBP28.58■■■□□ 2.17
LCNL1-203ENST00000460177 PHKG2P15735 406 aa28.58■■■□□ 2.17
LCNL1-203ENST00000460177 TEFQ10587 303 aa28.58■■■□□ 2.17
LCNL1-203ENST00000460177 FTSJ3Q8IY81 847 aaKnown RBP28.58■■■□□ 2.17
LCNL1-203ENST00000460177 EVA1CP58658 441 aa28.57■■■□□ 2.16
LCNL1-203ENST00000460177 BTG4Q9NY30 223 aa28.57■■■□□ 2.16
LCNL1-203ENST00000460177 MRC1P22897 1456 aa28.57■■■□□ 2.16
LCNL1-203ENST00000460177 WNK3Q9BYP7 1800 aa28.56■■■□□ 2.16
LCNL1-203ENST00000460177 MVPQ14764 893 aaKnown RBP28.55■■■□□ 2.16
LCNL1-203ENST00000460177 IFNL2Q8IZJ0 200 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms