RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
CCDC50-203ENST00000460064 GRM5P41594 1212 aa9.71□□□□□ -0.86
CCDC50-203ENST00000460064 SEC13P55735 322 aa9.71□□□□□ -0.86
CCDC50-203ENST00000460064 SIX5Q8N196 739 aa9.71□□□□□ -0.86
CCDC50-203ENST00000460064 TPCN2Q8NHX9 752 aa9.71□□□□□ -0.86
CCDC50-203ENST00000460064 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.86
CCDC50-203ENST00000460064 SIAH2O43255 324 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 FSHRP23945 695 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 IFFO2Q5TF58 517 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 MPNDQ8N594 471 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
CCDC50-203ENST00000460064 DKK1O94907 266 aa9.69□□□□□ -0.86
CCDC50-203ENST00000460064 SCTRP47872 440 aa9.69□□□□□ -0.86
CCDC50-203ENST00000460064 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
CCDC50-203ENST00000460064 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
CCDC50-203ENST00000460064 SFI1A8K8P3 1242 aa9.68□□□□□ -0.86
CCDC50-203ENST00000460064 WNT7AO00755 349 aa9.68□□□□□ -0.86
CCDC50-203ENST00000460064 SWI5Q1ZZU3 235 aa9.68□□□□□ -0.86
CCDC50-203ENST00000460064 CC2D2BQ6DHV5 1058 aa9.68□□□□□ -0.86
CCDC50-203ENST00000460064 CLP1Q92989 425 aaKnown RBP9.68□□□□□ -0.86
CCDC50-203ENST00000460064 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
CCDC50-203ENST00000460064 IVNS1ABPQ9Y6Y0 642 aa9.68□□□□□ -0.86
CCDC50-203ENST00000460064 SSFA2P28290 1259 aa9.67□□□□□ -0.86
CCDC50-203ENST00000460064 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
CCDC50-203ENST00000460064 HINFPQ9BQA5 517 aa9.67□□□□□ -0.86
CCDC50-203ENST00000460064 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
CCDC50-203ENST00000460064 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
CCDC50-203ENST00000460064 ADH1CP00326 375 aa9.66□□□□□ -0.86
CCDC50-203ENST00000460064 ERVK-9P63128 1117 aa9.66□□□□□ -0.86
CCDC50-203ENST00000460064 NR5A1Q13285 461 aa9.66□□□□□ -0.86
CCDC50-203ENST00000460064 TMCO4Q5TGY1 634 aa9.66□□□□□ -0.86
CCDC50-203ENST00000460064 CCDC116Q8IYX3 515 aa9.66□□□□□ -0.86
CCDC50-203ENST00000460064 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
CCDC50-203ENST00000460064 PHLDB3Q6NSJ2 640 aa9.65□□□□□ -0.86
CCDC50-203ENST00000460064 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCDC50-203ENST00000460064 PRMT3O60678 531 aa9.64□□□□□ -0.87
CCDC50-203ENST00000460064 ARID4AP29374 1257 aaPredicted RBP9.64□□□□□ -0.87
CCDC50-203ENST00000460064 MYT1Q01538 1121 aa9.64□□□□□ -0.87
CCDC50-203ENST00000460064 FOXC1Q12948 553 aa9.64□□□□□ -0.87
CCDC50-203ENST00000460064 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
CCDC50-203ENST00000460064 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
CCDC50-203ENST00000460064 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
CCDC50-203ENST00000460064 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
CCDC50-203ENST00000460064 LGR5O75473 907 aa9.63□□□□□ -0.87
CCDC50-203ENST00000460064 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
CCDC50-203ENST00000460064 ZNF598Q86UK7 904 aaKnown RBP9.63□□□□□ -0.87
CCDC50-203ENST00000460064 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
CCDC50-203ENST00000460064 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
CCDC50-203ENST00000460064 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
CCDC50-203ENST00000460064 GNEQ9Y223 722 aaKnown RBP9.62□□□□□ -0.87
CCDC50-203ENST00000460064 TXNDC2Q86VQ3 553 aa9.61□□□□□ -0.87
CCDC50-203ENST00000460064 TSEN2Q8NCE0 465 aaKnown RBP9.61□□□□□ -0.87
CCDC50-203ENST00000460064 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
CCDC50-203ENST00000460064 EMILIN1Q9Y6C2 1016 aa9.61□□□□□ -0.87
CCDC50-203ENST00000460064 WASF2Q9Y6W5 498 aa9.61□□□□□ -0.87
CCDC50-203ENST00000460064 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 M0R2N6 131 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 LILRA1O75019 489 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 NR3C2P08235 984 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 GDF10P55107 478 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 ZNF358Q9NW07 568 aa9.6□□□□□ -0.87
CCDC50-203ENST00000460064 A0A0G2JS52 829 aa9.59□□□□□ -0.87
CCDC50-203ENST00000460064 BACH1O14867 736 aa9.59□□□□□ -0.87
CCDC50-203ENST00000460064 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
CCDC50-203ENST00000460064 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
CCDC50-203ENST00000460064 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
CCDC50-203ENST00000460064 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
CCDC50-203ENST00000460064 SCNN1AP37088 669 aa9.58□□□□□ -0.88
CCDC50-203ENST00000460064 NNTQ13423 1086 aa9.58□□□□□ -0.88
CCDC50-203ENST00000460064 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
CCDC50-203ENST00000460064 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
CCDC50-203ENST00000460064 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
CCDC50-203ENST00000460064 SERTAD1Q9UHV2 236 aa9.58□□□□□ -0.88
CCDC50-203ENST00000460064 GNRH1P01148 92 aa9.57□□□□□ -0.88
CCDC50-203ENST00000460064 INHAP05111 366 aa9.57□□□□□ -0.88
CCDC50-203ENST00000460064 SCNN1DP51172 638 aa9.57□□□□□ -0.88
CCDC50-203ENST00000460064 OCLNQ16625 522 aa9.57□□□□□ -0.88
CCDC50-203ENST00000460064 C1orf216Q8TAB5 229 aa9.57□□□□□ -0.88
CCDC50-203ENST00000460064 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
CCDC50-203ENST00000460064 TTC24A2A3L6 582 aaPredicted RBP9.56□□□□□ -0.88
CCDC50-203ENST00000460064 ESCO1Q5FWF5 840 aa9.56□□□□□ -0.88
CCDC50-203ENST00000460064 TNS4Q8IZW8 715 aa9.56□□□□□ -0.88
CCDC50-203ENST00000460064 ETNK1Q9HBU6 452 aa9.56□□□□□ -0.88
CCDC50-203ENST00000460064 MTMR7Q9Y216 660 aa9.56□□□□□ -0.88
CCDC50-203ENST00000460064 WEE1P30291 646 aa9.55□□□□□ -0.88
CCDC50-203ENST00000460064 SND1Q7KZF4 910 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC50-203ENST00000460064 TAS1R3Q7RTX0 852 aa9.55□□□□□ -0.88
CCDC50-203ENST00000460064 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
CCDC50-203ENST00000460064 SERPINB4P48594 390 aa9.54□□□□□ -0.88
CCDC50-203ENST00000460064 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
CCDC50-203ENST00000460064 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
CCDC50-203ENST00000460064 RAB6BQ9NRW1 208 aa9.54□□□□□ -0.88
CCDC50-203ENST00000460064 J3QL48 77 aa9.53□□□□□ -0.88
CCDC50-203ENST00000460064 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
CCDC50-203ENST00000460064 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
CCDC50-203ENST00000460064 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
CCDC50-203ENST00000460064 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms