RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 CABP1Q9NZU7 370 aa19.91■□□□□ 0.78
PCOLCE-202ENST00000460002 NSD2O96028 1365 aa19.91■□□□□ 0.78
PCOLCE-202ENST00000460002 NFAT5O94916 1531 aa19.91■□□□□ 0.78
PCOLCE-202ENST00000460002 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
PCOLCE-202ENST00000460002 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
PCOLCE-202ENST00000460002 ERBB3P21860 1342 aa19.9■□□□□ 0.78
PCOLCE-202ENST00000460002 DDX54Q8TDD1 881 aaKnown RBP19.88■□□□□ 0.77
PCOLCE-202ENST00000460002 ANKRD36BQ8N2N9 1353 aa19.87■□□□□ 0.77
PCOLCE-202ENST00000460002 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
PCOLCE-202ENST00000460002 TTC21BQ7Z4L5 1316 aa19.85■□□□□ 0.77
PCOLCE-202ENST00000460002 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
PCOLCE-202ENST00000460002 DOT1LQ8TEK3 1739 aa19.82■□□□□ 0.76
PCOLCE-202ENST00000460002 FLAD1Q8NFF5 587 aa19.81■□□□□ 0.76
PCOLCE-202ENST00000460002 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
PCOLCE-202ENST00000460002 AMIGO3Q86WK7 504 aa19.8■□□□□ 0.76
PCOLCE-202ENST00000460002 ANKRD24Q8TF21 1146 aa19.8■□□□□ 0.76
PCOLCE-202ENST00000460002 USP54Q70EL1 1684 aa19.79■□□□□ 0.76
PCOLCE-202ENST00000460002 USP47Q96K76 1375 aa19.78■□□□□ 0.76
PCOLCE-202ENST00000460002 C5P01031 1676 aa19.78■□□□□ 0.76
PCOLCE-202ENST00000460002 ARHGAP27Q6ZUM4 889 aa19.77■□□□□ 0.76
PCOLCE-202ENST00000460002 SMIM5Q71RC9 77 aa19.77■□□□□ 0.76
PCOLCE-202ENST00000460002 BCS1LQ9Y276 419 aa19.77■□□□□ 0.76
PCOLCE-202ENST00000460002 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
PCOLCE-202ENST00000460002 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
PCOLCE-202ENST00000460002 KCPQ6ZWJ8 1503 aa19.76■□□□□ 0.75
PCOLCE-202ENST00000460002 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
PCOLCE-202ENST00000460002 C9orf131Q5VYM1 1079 aa19.75■□□□□ 0.75
PCOLCE-202ENST00000460002 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
PCOLCE-202ENST00000460002 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
PCOLCE-202ENST00000460002 SMC1BQ8NDV3 1235 aa19.74■□□□□ 0.75
PCOLCE-202ENST00000460002 RRAGCQ9HB90 399 aa19.74■□□□□ 0.75
PCOLCE-202ENST00000460002 TOGARAM1Q9Y4F4 1720 aa19.73■□□□□ 0.75
PCOLCE-202ENST00000460002 PLEKHG2Q9H7P9 1386 aa19.73■□□□□ 0.75
PCOLCE-202ENST00000460002 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
PCOLCE-202ENST00000460002 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
PCOLCE-202ENST00000460002 PHF14O94880 888 aa19.72■□□□□ 0.75
PCOLCE-202ENST00000460002 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
PCOLCE-202ENST00000460002 KDM2BQ8NHM5 1336 aa19.72■□□□□ 0.75
PCOLCE-202ENST00000460002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.7■□□□□ 0.74
PCOLCE-202ENST00000460002 A0A0G2JLW4 131 aa19.7■□□□□ 0.74
PCOLCE-202ENST00000460002 AK7Q96M32 723 aa19.69■□□□□ 0.74
PCOLCE-202ENST00000460002 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
PCOLCE-202ENST00000460002 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
PCOLCE-202ENST00000460002 USP31Q70CQ4 1352 aa19.68■□□□□ 0.74
PCOLCE-202ENST00000460002 LTN1O94822 1766 aa19.67■□□□□ 0.74
PCOLCE-202ENST00000460002 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
PCOLCE-202ENST00000460002 TGFB2P61812 414 aa19.67■□□□□ 0.74
PCOLCE-202ENST00000460002 ZCRB1Q8TBF4 217 aaKnown RBP19.67■□□□□ 0.74
PCOLCE-202ENST00000460002 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
PCOLCE-202ENST00000460002 PKD1L3Q7Z443 1732 aa19.66■□□□□ 0.74
PCOLCE-202ENST00000460002 FCHSD2O94868 740 aa19.66■□□□□ 0.74
PCOLCE-202ENST00000460002 KIAA1210Q9ULL0 1709 aa19.65■□□□□ 0.74
PCOLCE-202ENST00000460002 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
PCOLCE-202ENST00000460002 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
PCOLCE-202ENST00000460002 FOXN1O15353 648 aa19.65■□□□□ 0.74
PCOLCE-202ENST00000460002 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
PCOLCE-202ENST00000460002 TNRC6CQ9HCJ0 1690 aaKnown RBP19.65■□□□□ 0.74
PCOLCE-202ENST00000460002 MMP10P09238 476 aa19.64■□□□□ 0.73
PCOLCE-202ENST00000460002 DPEP1P16444 411 aa19.64■□□□□ 0.73
PCOLCE-202ENST00000460002 HMGB2P26583 209 aaKnown RBP19.64■□□□□ 0.73
PCOLCE-202ENST00000460002 LTV1Q96GA3 475 aaPredicted RBP19.64■□□□□ 0.73
PCOLCE-202ENST00000460002 PRDM10Q9NQV6 1147 aa19.64■□□□□ 0.73
PCOLCE-202ENST00000460002 MEGF6O75095 1541 aa19.64■□□□□ 0.73
PCOLCE-202ENST00000460002 SSFA2P28290 1259 aa19.63■□□□□ 0.73
PCOLCE-202ENST00000460002 NME9Q86XW9 330 aa19.63■□□□□ 0.73
PCOLCE-202ENST00000460002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.63■□□□□ 0.73
PCOLCE-202ENST00000460002 RNF181Q9P0P0 153 aa19.63■□□□□ 0.73
PCOLCE-202ENST00000460002 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
PCOLCE-202ENST00000460002 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
PCOLCE-202ENST00000460002 FAM208AQ9UK61 1670 aaKnown RBP19.61■□□□□ 0.73
PCOLCE-202ENST00000460002 IP6K1Q92551 441 aa19.6■□□□□ 0.73
PCOLCE-202ENST00000460002 KCNA3P22001 575 aa19.58■□□□□ 0.72
PCOLCE-202ENST00000460002 ABHD8Q96I13 439 aa19.58■□□□□ 0.72
PCOLCE-202ENST00000460002 MKRN1Q9UHC7 482 aaKnown RBP19.58■□□□□ 0.72
PCOLCE-202ENST00000460002 BRCA1P38398 1863 aaKnown RBP19.58■□□□□ 0.72
PCOLCE-202ENST00000460002 MPRIPQ6WCQ1 1025 aa19.57■□□□□ 0.72
PCOLCE-202ENST00000460002 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
PCOLCE-202ENST00000460002 MLLT1Q03111 559 aaPredicted RBP19.56■□□□□ 0.72
PCOLCE-202ENST00000460002 LINC00116Q8NCU8 138 aa19.56■□□□□ 0.72
PCOLCE-202ENST00000460002 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
PCOLCE-202ENST00000460002 SBNO2Q9Y2G9 1366 aa19.55■□□□□ 0.72
PCOLCE-202ENST00000460002 ARFGEF1Q9Y6D6 1849 aa19.54■□□□□ 0.72
PCOLCE-202ENST00000460002 VEGFAP15692 232 aaPredicted RBP19.54■□□□□ 0.72
PCOLCE-202ENST00000460002 CTCFP49711 727 aaPredicted RBP19.54■□□□□ 0.72
PCOLCE-202ENST00000460002 GNPATO15228 680 aa19.53■□□□□ 0.72
PCOLCE-202ENST00000460002 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
PCOLCE-202ENST00000460002 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
PCOLCE-202ENST00000460002 CREBZFQ9NS37 354 aa19.51■□□□□ 0.71
PCOLCE-202ENST00000460002 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
PCOLCE-202ENST00000460002 RGPD2P0DJD1 1756 aa19.5■□□□□ 0.71
PCOLCE-202ENST00000460002 RGS19P49795 217 aa19.5■□□□□ 0.71
PCOLCE-202ENST00000460002 LBX1P52954 281 aa19.5■□□□□ 0.71
PCOLCE-202ENST00000460002 CD163L1Q9NR16 1453 aa19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 LOC102724428A0A0B4J2F2 783 aa19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 GLTPD2A6NH11 291 aa19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 SIK1P57059 783 aa19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 DALRD3Q5D0E6 543 aaKnown RBP19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 NLGN1Q8N2Q7 840 aa19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
PCOLCE-202ENST00000460002 MAP2P11137 1827 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms