RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 CBLBQ13191 982 aa12.09□□□□□ -0.47
CKAP2-204ENST00000459902 TRIM52Q96A61 297 aa12.09□□□□□ -0.47
CKAP2-204ENST00000459902 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
CKAP2-204ENST00000459902 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
CKAP2-204ENST00000459902 DGAT1O75907 488 aa12.08□□□□□ -0.48
CKAP2-204ENST00000459902 AVPP01185 164 aa12.08□□□□□ -0.48
CKAP2-204ENST00000459902 LAPTM4AQ15012 233 aa12.08□□□□□ -0.48
CKAP2-204ENST00000459902 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
CKAP2-204ENST00000459902 PCDHGA11Q9Y5H2 935 aa12.08□□□□□ -0.48
CKAP2-204ENST00000459902 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
CKAP2-204ENST00000459902 Q6ZVU0 165 aa12.07□□□□□ -0.48
CKAP2-204ENST00000459902 IRX2Q9BZI1 471 aaPredicted RBP12.07□□□□□ -0.48
CKAP2-204ENST00000459902 CAPN5O15484 640 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-204ENST00000459902 PPP1R15AO75807 674 aaPredicted RBP12.06□□□□□ -0.48
CKAP2-204ENST00000459902 GTF2IP78347 998 aa12.06□□□□□ -0.48
CKAP2-204ENST00000459902 CLDN10P78369 228 aa12.06□□□□□ -0.48
CKAP2-204ENST00000459902 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
CKAP2-204ENST00000459902 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
CKAP2-204ENST00000459902 ZBTB7BO15156 539 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-204ENST00000459902 RASA1P20936 1047 aa12.05□□□□□ -0.48
CKAP2-204ENST00000459902 CRTC2Q53ET0 693 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-204ENST00000459902 KDF1Q8NAX2 398 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-204ENST00000459902 ADH1AP07327 375 aa12.03□□□□□ -0.48
CKAP2-204ENST00000459902 ATP1A2P50993 1020 aa12.03□□□□□ -0.48
CKAP2-204ENST00000459902 LARP1Q6PKG0 1096 aaKnown RBP12.03□□□□□ -0.48
CKAP2-204ENST00000459902 DNAAF2Q9NVR5 837 aaKnown RBP12.03□□□□□ -0.48
CKAP2-204ENST00000459902 KIAA1024Q9UPX6 916 aa12.03□□□□□ -0.48
CKAP2-204ENST00000459902 PTK7Q13308 1070 aa12.02□□□□□ -0.49
CKAP2-204ENST00000459902 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.49
CKAP2-204ENST00000459902 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.49
CKAP2-204ENST00000459902 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
CKAP2-204ENST00000459902 ATG7O95352 703 aa12.01□□□□□ -0.49
CKAP2-204ENST00000459902 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
CKAP2-204ENST00000459902 MEIOBQ8N635 442 aa12.01□□□□□ -0.49
CKAP2-204ENST00000459902 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L15C9J2P7 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L10C9JJH3 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L12C9JPN9 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L11C9JVI0 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L21D6R901 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L18D6R9N7 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L22D6RA61 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L19D6RCP7 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L20D6RJB6 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 STAU1O95793 577 aaKnown RBP12□□□□□ -0.49
CKAP2-204ENST00000459902 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
CKAP2-204ENST00000459902 USP17L24Q0WX57 530 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 CTC1Q2NKJ3 1217 aa12□□□□□ -0.49
CKAP2-204ENST00000459902 ZNF594Q96JF6 807 aaPredicted RBP12□□□□□ -0.49
CKAP2-204ENST00000459902 DKK1O94907 266 aa11.99□□□□□ -0.49
CKAP2-204ENST00000459902 PSME1Q06323 249 aa11.99□□□□□ -0.49
CKAP2-204ENST00000459902 CCDC102BQ68D86 513 aa11.99□□□□□ -0.49
CKAP2-204ENST00000459902 AXIN1O15169 862 aa11.98□□□□□ -0.49
CKAP2-204ENST00000459902 GNRH1P01148 92 aa11.98□□□□□ -0.49
CKAP2-204ENST00000459902 SCNN1DP51172 638 aa11.98□□□□□ -0.49
CKAP2-204ENST00000459902 RELBQ01201 579 aa11.98□□□□□ -0.49
CKAP2-204ENST00000459902 CRIPAKQ8N1N5 446 aa11.98□□□□□ -0.49
CKAP2-204ENST00000459902 PTGIRP43119 386 aa11.97□□□□□ -0.49
CKAP2-204ENST00000459902 SIX5Q8N196 739 aa11.97□□□□□ -0.49
CKAP2-204ENST00000459902 TPCN2Q8NHX9 752 aa11.97□□□□□ -0.49
CKAP2-204ENST00000459902 ARHGEF10LQ9HCE6 1279 aa11.97□□□□□ -0.49
CKAP2-204ENST00000459902 RAB6BQ9NRW1 208 aa11.97□□□□□ -0.49
CKAP2-204ENST00000459902 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
CKAP2-204ENST00000459902 DPYDQ12882 1025 aa11.96□□□□□ -0.49
CKAP2-204ENST00000459902 ELOAQ14241 798 aaKnown RBP11.96□□□□□ -0.49
CKAP2-204ENST00000459902 ANKMY2Q8IV38 441 aa11.96□□□□□ -0.49
CKAP2-204ENST00000459902 ARXQ96QS3 562 aa11.96□□□□□ -0.49
CKAP2-204ENST00000459902 ZNF395Q9H8N7 513 aaPredicted RBP11.96□□□□□ -0.49
CKAP2-204ENST00000459902 ETNK1Q9HBU6 452 aa11.96□□□□□ -0.49
CKAP2-204ENST00000459902 ZMIZ1Q9ULJ6 1067 aa11.96□□□□□ -0.49
CKAP2-204ENST00000459902 NOVA2Q9UNW9 492 aaKnown RBP11.96□□□□□ -0.49
CKAP2-204ENST00000459902 A0A1W2PRU2 124 aa11.95□□□□□ -0.5
CKAP2-204ENST00000459902 ST8SIA5O15466 376 aa11.95□□□□□ -0.5
CKAP2-204ENST00000459902 GDF10P55107 478 aa11.95□□□□□ -0.5
CKAP2-204ENST00000459902 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
CKAP2-204ENST00000459902 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
CKAP2-204ENST00000459902 MRPL14Q6P1L8 145 aaKnown RBP11.94□□□□□ -0.5
CKAP2-204ENST00000459902 LINC00528Q8N1L1 170 aa11.94□□□□□ -0.5
CKAP2-204ENST00000459902 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.94□□□□□ -0.5
CKAP2-204ENST00000459902 SFI1A8K8P3 1242 aa11.93□□□□□ -0.5
CKAP2-204ENST00000459902 INHAP05111 366 aa11.93□□□□□ -0.5
CKAP2-204ENST00000459902 BMP1P13497 986 aa11.93□□□□□ -0.5
CKAP2-204ENST00000459902 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
CKAP2-204ENST00000459902 UPP2O95045 317 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 IL2RAP01589 272 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 SEC13P55735 322 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 TRIM46Q7Z4K8 759 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 STK32AQ8WU08 396 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 ZNF358Q9NW07 568 aa11.92□□□□□ -0.5
CKAP2-204ENST00000459902 CLN3Q13286 438 aa11.91□□□□□ -0.5
CKAP2-204ENST00000459902 C6orf118Q5T5N4 469 aa11.91□□□□□ -0.5
CKAP2-204ENST00000459902 CNKSR1Q969H4 720 aa11.91□□□□□ -0.5
CKAP2-204ENST00000459902 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
CKAP2-204ENST00000459902 RBM19Q9Y4C8 960 aaKnown RBP11.91□□□□□ -0.5
CKAP2-204ENST00000459902 MEN1O00255 615 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms