RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
UFD1-205ENST00000459854 RTF1Q92541 710 aaKnown RBP11.81□□□□□ -0.52
UFD1-205ENST00000459854 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
UFD1-205ENST00000459854 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
UFD1-205ENST00000459854 NME9Q86XW9 330 aa11.8□□□□□ -0.52
UFD1-205ENST00000459854 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
UFD1-205ENST00000459854 RNF20Q5VTR2 975 aa11.8□□□□□ -0.52
UFD1-205ENST00000459854 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
UFD1-205ENST00000459854 CCAR2Q8N163 923 aaKnown RBP11.8□□□□□ -0.52
UFD1-205ENST00000459854 DCCP43146 1447 aa11.79□□□□□ -0.52
UFD1-205ENST00000459854 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
UFD1-205ENST00000459854 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
UFD1-205ENST00000459854 TRAK2O60296 914 aa11.79□□□□□ -0.52
UFD1-205ENST00000459854 EXOC6Q8TAG9 804 aa11.79□□□□□ -0.52
UFD1-205ENST00000459854 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
UFD1-205ENST00000459854 PDCL3Q9H2J4 239 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 IFT57Q9NWB7 429 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 MYO5BQ9ULV0 1848 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 H0YHG0 523 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 H3BQV1 296 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 ZKSCAN2Q63HK3 967 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 NGLY1Q96IV0 654 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 NAT10Q9H0A0 1025 aaKnown RBP11.78□□□□□ -0.52
UFD1-205ENST00000459854 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 EDC4Q6P2E9 1401 aaKnown RBP11.78□□□□□ -0.52
UFD1-205ENST00000459854 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
UFD1-205ENST00000459854 STK31Q9BXU1 1019 aa11.77□□□□□ -0.52
UFD1-205ENST00000459854 A0A1W2PP64 1363 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 SASS6Q6UVJ0 657 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 ADGRB1O14514 1584 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 TPD52L1Q16890 204 aaPredicted RBP11.77□□□□□ -0.53
UFD1-205ENST00000459854 DEF6Q9H4E7 631 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 DDX19BQ9UMR2 479 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 SLC4A3P48751 1232 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.53
UFD1-205ENST00000459854 STRN4Q9NRL3 753 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 POLR1AO95602 1720 aaPredicted RBP11.76□□□□□ -0.53
UFD1-205ENST00000459854 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 MTHFSP49914 203 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
UFD1-205ENST00000459854 ATP7BP35670 1465 aa11.75□□□□□ -0.53
UFD1-205ENST00000459854 MCM2P49736 904 aa11.75□□□□□ -0.53
UFD1-205ENST00000459854 FAM184AQ8NB25 1140 aa11.75□□□□□ -0.53
UFD1-205ENST00000459854 TOM1L2Q6ZVM7 507 aa11.75□□□□□ -0.53
UFD1-205ENST00000459854 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
UFD1-205ENST00000459854 PRR36Q9H6K5 1346 aa11.75□□□□□ -0.53
UFD1-205ENST00000459854 ESPNB1AK53 854 aa11.74□□□□□ -0.53
UFD1-205ENST00000459854 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
UFD1-205ENST00000459854 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
UFD1-205ENST00000459854 FYB1O15117 783 aa11.74□□□□□ -0.53
UFD1-205ENST00000459854 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
UFD1-205ENST00000459854 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
UFD1-205ENST00000459854 PPP2R1AP30153 589 aa11.73□□□□□ -0.53
UFD1-205ENST00000459854 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
UFD1-205ENST00000459854 CALCOCO1Q9P1Z2 691 aa11.73□□□□□ -0.53
UFD1-205ENST00000459854 CCDC47Q96A33 483 aaKnown RBP11.73□□□□□ -0.53
UFD1-205ENST00000459854 TSPY26PQ9H489 355 aa11.73□□□□□ -0.53
UFD1-205ENST00000459854 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
UFD1-205ENST00000459854 GCP02774 474 aa11.72□□□□□ -0.53
UFD1-205ENST00000459854 DDX17Q92841 729 aaKnown RBP11.72□□□□□ -0.53
UFD1-205ENST00000459854 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
UFD1-205ENST00000459854 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
UFD1-205ENST00000459854 RRS1Q15050 365 aaKnown RBP11.72□□□□□ -0.53
UFD1-205ENST00000459854 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
UFD1-205ENST00000459854 CPLX2Q6PUV4 134 aaKnown RBP11.72□□□□□ -0.53
UFD1-205ENST00000459854 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
UFD1-205ENST00000459854 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
UFD1-205ENST00000459854 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
UFD1-205ENST00000459854 ASXL1Q8IXJ9 1541 aa11.72□□□□□ -0.53
UFD1-205ENST00000459854 QRICH2Q9H0J4 1663 aa11.72□□□□□ -0.53
UFD1-205ENST00000459854 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
UFD1-205ENST00000459854 GOLGA6L7A0A1B0GV03 622 aa11.71□□□□□ -0.53
UFD1-205ENST00000459854 ERLIN1O75477 346 aa11.71□□□□□ -0.53
UFD1-205ENST00000459854 FAM107BQ9H098 131 aa11.71□□□□□ -0.53
UFD1-205ENST00000459854 UQCRHLA0A096LP55 91 aa11.71□□□□□ -0.54
UFD1-205ENST00000459854 UQCRHP07919 91 aa11.71□□□□□ -0.54
UFD1-205ENST00000459854 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.54
UFD1-205ENST00000459854 IFT172Q9UG01 1749 aa11.71□□□□□ -0.54
UFD1-205ENST00000459854 USP6P35125 1406 aa11.71□□□□□ -0.54
UFD1-205ENST00000459854 KIF2AO00139 706 aaPredicted RBP11.7□□□□□ -0.54
UFD1-205ENST00000459854 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 APBB1O00213 710 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 KIAA0754O94854 1291 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 CCDC73Q6ZRK6 1079 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 TATP17735 454 aaPredicted RBP11.7□□□□□ -0.54
UFD1-205ENST00000459854 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 PDIA4P13667 645 aaKnown RBP11.7□□□□□ -0.54
UFD1-205ENST00000459854 SBNO1A3KN83 1393 aa11.7□□□□□ -0.54
UFD1-205ENST00000459854 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
UFD1-205ENST00000459854 CCDC112Q8NEF3 446 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 CARD14Q9BXL6 1004 aa11.69□□□□□ -0.54
UFD1-205ENST00000459854 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms