RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
COMMD1-206ENST00000458337 KCNQ2O43526 872 aa18.18■□□□□ 0.5
COMMD1-206ENST00000458337 TATP17735 454 aaPredicted RBP18.18■□□□□ 0.5
COMMD1-206ENST00000458337 KAT6BQ8WYB5 2073 aa18.16■□□□□ 0.5
COMMD1-206ENST00000458337 PROM2Q8N271 834 aa18.15■□□□□ 0.5
COMMD1-206ENST00000458337 CC2D1BQ5T0F9 858 aaKnown RBP18.14■□□□□ 0.49
COMMD1-206ENST00000458337 ACSBG1Q96GR2 724 aa18.14■□□□□ 0.49
COMMD1-206ENST00000458337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
COMMD1-206ENST00000458337 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
COMMD1-206ENST00000458337 IGSF1Q8N6C5 1336 aa18.13■□□□□ 0.49
COMMD1-206ENST00000458337 RGPD3A6NKT7 1758 aaPredicted RBP18.12■□□□□ 0.49
COMMD1-206ENST00000458337 RGPD4Q7Z3J3 1758 aa18.12■□□□□ 0.49
COMMD1-206ENST00000458337 MTHFSP49914 203 aa18.12■□□□□ 0.49
COMMD1-206ENST00000458337 NHSQ6T4R5 1651 aa18.12■□□□□ 0.49
COMMD1-206ENST00000458337 RREB1Q92766 1687 aa18.12■□□□□ 0.49
COMMD1-206ENST00000458337 CYP27B1O15528 508 aa18.11■□□□□ 0.49
COMMD1-206ENST00000458337 IL13P35225 146 aa18.11■□□□□ 0.49
COMMD1-206ENST00000458337 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
COMMD1-206ENST00000458337 PCDH11XQ9BZA7 1347 aa18.1■□□□□ 0.49
COMMD1-206ENST00000458337 PCDH11YQ9BZA8 1340 aa18.1■□□□□ 0.49
COMMD1-206ENST00000458337 PRIM1P49642 420 aaKnown RBP18.1■□□□□ 0.49
COMMD1-206ENST00000458337 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
COMMD1-206ENST00000458337 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
COMMD1-206ENST00000458337 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
COMMD1-206ENST00000458337 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
COMMD1-206ENST00000458337 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
COMMD1-206ENST00000458337 NUP188Q5SRE5 1749 aa18.08■□□□□ 0.48
COMMD1-206ENST00000458337 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
COMMD1-206ENST00000458337 PSDA5PKW4 1024 aaPredicted RBP18.07■□□□□ 0.48
COMMD1-206ENST00000458337 R3HDM1Q15032 1099 aaKnown RBP18.07■□□□□ 0.48
COMMD1-206ENST00000458337 BTAF1O14981 1849 aa18.07■□□□□ 0.48
COMMD1-206ENST00000458337 KDRP35968 1356 aa18.04■□□□□ 0.48
COMMD1-206ENST00000458337 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
COMMD1-206ENST00000458337 IFNL2Q8IZJ0 200 aa18.04■□□□□ 0.48
COMMD1-206ENST00000458337 PHKG2P15735 406 aa18.03■□□□□ 0.48
COMMD1-206ENST00000458337 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
COMMD1-206ENST00000458337 PLEKHO1Q53GL0 409 aaPredicted RBP18.03■□□□□ 0.48
COMMD1-206ENST00000458337 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
COMMD1-206ENST00000458337 AEBP1Q8IUX7 1158 aa18.03■□□□□ 0.48
COMMD1-206ENST00000458337 SYTL4Q96C24 671 aaPredicted RBP18.03■□□□□ 0.48
COMMD1-206ENST00000458337 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
COMMD1-206ENST00000458337 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
COMMD1-206ENST00000458337 DOT1LQ8TEK3 1739 aa18.02■□□□□ 0.48
COMMD1-206ENST00000458337 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
COMMD1-206ENST00000458337 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
COMMD1-206ENST00000458337 LRRC4BQ9NT99 713 aa18.01■□□□□ 0.47
COMMD1-206ENST00000458337 PPP2R1AP30153 589 aa17.99■□□□□ 0.47
COMMD1-206ENST00000458337 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
COMMD1-206ENST00000458337 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
COMMD1-206ENST00000458337 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
COMMD1-206ENST00000458337 PIGBQ92521 554 aa17.98■□□□□ 0.47
COMMD1-206ENST00000458337 ITGB4P16144 1822 aa17.98■□□□□ 0.47
COMMD1-206ENST00000458337 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
COMMD1-206ENST00000458337 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
COMMD1-206ENST00000458337 STK32BQ9NY57 414 aa17.97■□□□□ 0.47
COMMD1-206ENST00000458337 LY75O60449 1722 aa17.96■□□□□ 0.47
COMMD1-206ENST00000458337 TOGARAM1Q9Y4F4 1720 aa17.96■□□□□ 0.47
COMMD1-206ENST00000458337 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
COMMD1-206ENST00000458337 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
COMMD1-206ENST00000458337 HMOX1P09601 288 aa17.95■□□□□ 0.46
COMMD1-206ENST00000458337 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
COMMD1-206ENST00000458337 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
COMMD1-206ENST00000458337 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
COMMD1-206ENST00000458337 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
COMMD1-206ENST00000458337 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
COMMD1-206ENST00000458337 TMOD3Q9NYL9 352 aa17.93■□□□□ 0.46
COMMD1-206ENST00000458337 LRP5O75197 1615 aa17.93■□□□□ 0.46
COMMD1-206ENST00000458337 HMGB2P26583 209 aaKnown RBP17.92■□□□□ 0.46
COMMD1-206ENST00000458337 KCNQ4P56696 695 aa17.92■□□□□ 0.46
COMMD1-206ENST00000458337 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
COMMD1-206ENST00000458337 C1orf141Q5JVX7 400 aa17.92■□□□□ 0.46
COMMD1-206ENST00000458337 CCNL1Q9UK58 526 aaPredicted RBP17.92■□□□□ 0.46
COMMD1-206ENST00000458337 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
COMMD1-206ENST00000458337 U2SURPO15042 1029 aaKnown RBP17.91■□□□□ 0.46
COMMD1-206ENST00000458337 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
COMMD1-206ENST00000458337 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
COMMD1-206ENST00000458337 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
COMMD1-206ENST00000458337 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
COMMD1-206ENST00000458337 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
COMMD1-206ENST00000458337 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
COMMD1-206ENST00000458337 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
COMMD1-206ENST00000458337 RALBP1Q15311 655 aa17.89■□□□□ 0.45
COMMD1-206ENST00000458337 CASZ1Q86V15 1759 aa17.89■□□□□ 0.45
COMMD1-206ENST00000458337 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
COMMD1-206ENST00000458337 CABP4P57796 275 aa17.87■□□□□ 0.45
COMMD1-206ENST00000458337 NFATC2IPQ8NCF5 419 aa17.87■□□□□ 0.45
COMMD1-206ENST00000458337 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
COMMD1-206ENST00000458337 LOC102724428A0A0B4J2F2 783 aa17.86■□□□□ 0.45
COMMD1-206ENST00000458337 FCHSD2O94868 740 aa17.86■□□□□ 0.45
COMMD1-206ENST00000458337 SIK1P57059 783 aa17.86■□□□□ 0.45
COMMD1-206ENST00000458337 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
COMMD1-206ENST00000458337 RNMTO43148 476 aaKnown RBP17.85■□□□□ 0.45
COMMD1-206ENST00000458337 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
COMMD1-206ENST00000458337 TFCP2L1Q9NZI6 479 aa17.85■□□□□ 0.45
COMMD1-206ENST00000458337 SCN11AQ9UI33 1791 aa17.85■□□□□ 0.45
COMMD1-206ENST00000458337 TAF1LQ8IZX4 1826 aa17.84■□□□□ 0.45
COMMD1-206ENST00000458337 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
COMMD1-206ENST00000458337 PNPLA7Q6ZV29 1317 aa17.84■□□□□ 0.45
COMMD1-206ENST00000458337 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
COMMD1-206ENST00000458337 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms