RNA–Protein interactions for RNA: ENST00000458090.1

AC009963.3-201, humanhuman

BASIC

Gene AC009963.3, Length 486 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.3-201ENST00000458090 USP47Q96K76 1375 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 MAP3K5Q99683 1374 aa8.61□□□□□ -1.03
AC009963.3-201ENST00000458090 MAP3K19Q56UN5 1328 aa8.6□□□□□ -1.03
AC009963.3-201ENST00000458090 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
AC009963.3-201ENST00000458090 GPR162Q16538 588 aa8.6□□□□□ -1.03
AC009963.3-201ENST00000458090 FLAD1Q8NFF5 587 aa8.6□□□□□ -1.03
AC009963.3-201ENST00000458090 PAPPAQ13219 1627 aa8.6□□□□□ -1.03
AC009963.3-201ENST00000458090 PRIM1P49642 420 aaKnown RBP8.59□□□□□ -1.03
AC009963.3-201ENST00000458090 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
AC009963.3-201ENST00000458090 TESK2Q96S53 571 aa8.59□□□□□ -1.03
AC009963.3-201ENST00000458090 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
AC009963.3-201ENST00000458090 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
AC009963.3-201ENST00000458090 PCDH11XQ9BZA7 1347 aa8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 PCDH11YQ9BZA8 1340 aa8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 COL24A1Q17RW2 1714 aa8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 MSH5O43196 834 aa8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 AKT1S1Q96B36 256 aa8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 SGIP1Q9BQI5 828 aa8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 CCNL1Q9UK58 526 aaPredicted RBP8.58□□□□□ -1.04
AC009963.3-201ENST00000458090 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 FYB1O15117 783 aa8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 SMARCC1Q92922 1105 aaPredicted RBP8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 LRRC4BQ9NT99 713 aa8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 FLT4P35916 1363 aa8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 TUBGCP6Q96RT7 1819 aa8.57□□□□□ -1.04
AC009963.3-201ENST00000458090 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 RRS1Q15050 365 aaKnown RBP8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 ZNF827Q17R98 1081 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 SPG7Q9UQ90 795 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 INSRP06213 1382 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 ITGB4P16144 1822 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 TAF1LQ8IZX4 1826 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 C5P01031 1676 aa8.56□□□□□ -1.04
AC009963.3-201ENST00000458090 PNPLA7Q6ZV29 1317 aa8.55□□□□□ -1.04
AC009963.3-201ENST00000458090 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
AC009963.3-201ENST00000458090 POTEDQ86YR6 584 aa8.55□□□□□ -1.04
AC009963.3-201ENST00000458090 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
AC009963.3-201ENST00000458090 NSD2O96028 1365 aa8.54□□□□□ -1.04
AC009963.3-201ENST00000458090 MEGF6O75095 1541 aa8.54□□□□□ -1.04
AC009963.3-201ENST00000458090 PPM1GO15355 546 aaPredicted RBP8.53□□□□□ -1.04
AC009963.3-201ENST00000458090 HSP90AB2PQ58FF8 381 aa8.53□□□□□ -1.04
AC009963.3-201ENST00000458090 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
AC009963.3-201ENST00000458090 AK7Q96M32 723 aa8.53□□□□□ -1.04
AC009963.3-201ENST00000458090 CD2APQ9Y5K6 639 aa8.53□□□□□ -1.04
AC009963.3-201ENST00000458090 CLSPNQ9HAW4 1339 aa8.53□□□□□ -1.04
AC009963.3-201ENST00000458090 PKD1L3Q7Z443 1732 aa8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 GIGYF1O75420 1035 aaPredicted RBP8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 FBLN1P23142 703 aa8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 COL23A1Q86Y22 540 aaPredicted RBP8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC009963.3-201ENST00000458090 ANKRD26Q9UPS8 1709 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 PLEKHG2Q9H7P9 1386 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 HSP90AB1P08238 724 aaKnown RBP8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 KCNQ4P56696 695 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 C1QTNF8P60827 252 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 IFNL2Q8IZJ0 200 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 TMOD3Q9NYL9 352 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
AC009963.3-201ENST00000458090 SENP3-EIF4A1A0A087X0R7 540 aa8.5□□□□□ -1.05
AC009963.3-201ENST00000458090 NKX1-1Q15270 411 aaPredicted RBP8.5□□□□□ -1.05
AC009963.3-201ENST00000458090 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
AC009963.3-201ENST00000458090 SSFA2P28290 1259 aa8.49□□□□□ -1.05
AC009963.3-201ENST00000458090 CYP27B1O15528 508 aa8.48□□□□□ -1.05
AC009963.3-201ENST00000458090 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
AC009963.3-201ENST00000458090 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
AC009963.3-201ENST00000458090 TOGARAM1Q9Y4F4 1720 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 LOC102724428A0A0B4J2F2 783 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 SIK1P57059 783 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 NLGN2Q8NFZ4 835 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 PIGBQ92521 554 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 EYA1Q99502 592 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
AC009963.3-201ENST00000458090 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.05
AC009963.3-201ENST00000458090 NCAPD2Q15021 1401 aa8.46□□□□□ -1.05
AC009963.3-201ENST00000458090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 ERVV-2B6SEH9 535 aa8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 PHF14O94880 888 aa8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 PHKG2P15735 406 aa8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 POLKQ9UBT6 870 aa8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
AC009963.3-201ENST00000458090 GNPATO15228 680 aa8.45□□□□□ -1.06
AC009963.3-201ENST00000458090 ADRA2BP18089 450 aa8.45□□□□□ -1.06
AC009963.3-201ENST00000458090 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
AC009963.3-201ENST00000458090 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms