RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 NBPF6Q5VWK0 638 aa20.94■□□□□ 0.94
CAPN13-203ENST00000458085 ARHGEF25Q86VW2 580 aa20.94■□□□□ 0.94
CAPN13-203ENST00000458085 ZNF428Q96B54 188 aa20.94■□□□□ 0.94
CAPN13-203ENST00000458085 NBPF4Q96M43 638 aa20.94■□□□□ 0.94
CAPN13-203ENST00000458085 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
CAPN13-203ENST00000458085 MIS18AQ9NYP9 233 aa20.94■□□□□ 0.94
CAPN13-203ENST00000458085 PHRF1Q9P1Y6 1649 aaKnown RBP20.94■□□□□ 0.94
CAPN13-203ENST00000458085 BRPF1P55201 1214 aaPredicted RBP20.93■□□□□ 0.94
CAPN13-203ENST00000458085 TMEM57Q8N5G2 664 aa20.93■□□□□ 0.94
CAPN13-203ENST00000458085 ALS2Q96Q42 1657 aa20.92■□□□□ 0.94
CAPN13-203ENST00000458085 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
CAPN13-203ENST00000458085 MS4A1P11836 297 aa20.92■□□□□ 0.94
CAPN13-203ENST00000458085 CADPS2Q86UW7 1296 aa20.92■□□□□ 0.94
CAPN13-203ENST00000458085 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
CAPN13-203ENST00000458085 RTF1Q92541 710 aaKnown RBP20.92■□□□□ 0.94
CAPN13-203ENST00000458085 MSH6P52701 1360 aa20.91■□□□□ 0.94
CAPN13-203ENST00000458085 IPO8O15397 1037 aaKnown RBP20.9■□□□□ 0.94
CAPN13-203ENST00000458085 MED1Q15648 1581 aaPredicted RBP20.9■□□□□ 0.94
CAPN13-203ENST00000458085 AAMPQ13685 434 aa20.89■□□□□ 0.94
CAPN13-203ENST00000458085 AXIN2Q9Y2T1 843 aa20.89■□□□□ 0.94
CAPN13-203ENST00000458085 ZNF335Q9H4Z2 1342 aaPredicted RBP20.89■□□□□ 0.94
CAPN13-203ENST00000458085 GNAT3A8MTJ3 354 aa20.88■□□□□ 0.93
CAPN13-203ENST00000458085 DDX19BQ9UMR2 479 aa20.87■□□□□ 0.93
CAPN13-203ENST00000458085 LRRC37A3O60309 1634 aa20.87■□□□□ 0.93
CAPN13-203ENST00000458085 PDE4AP27815 886 aa20.87■□□□□ 0.93
CAPN13-203ENST00000458085 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
CAPN13-203ENST00000458085 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
CAPN13-203ENST00000458085 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
CAPN13-203ENST00000458085 RGS3P49796 1198 aa20.86■□□□□ 0.93
CAPN13-203ENST00000458085 RGPD5Q99666 1765 aa20.86■□□□□ 0.93
CAPN13-203ENST00000458085 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
CAPN13-203ENST00000458085 TSPYL4Q9UJ04 414 aa20.85■□□□□ 0.93
CAPN13-203ENST00000458085 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
CAPN13-203ENST00000458085 ANKRD24Q8TF21 1146 aa20.85■□□□□ 0.93
CAPN13-203ENST00000458085 NPHP3Q7Z494 1330 aa20.84■□□□□ 0.93
CAPN13-203ENST00000458085 CABLES1Q8TDN4 633 aa20.84■□□□□ 0.93
CAPN13-203ENST00000458085 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
CAPN13-203ENST00000458085 BACH2Q9BYV9 841 aa20.84■□□□□ 0.93
CAPN13-203ENST00000458085 ZBTB40Q9NUA8 1239 aa20.83■□□□□ 0.93
CAPN13-203ENST00000458085 PXDNQ92626 1479 aa20.83■□□□□ 0.93
CAPN13-203ENST00000458085 BRINP3Q76B58 766 aa20.82■□□□□ 0.92
CAPN13-203ENST00000458085 ABCC4O15439 1325 aa20.81■□□□□ 0.92
CAPN13-203ENST00000458085 NCAPD2Q15021 1401 aa20.81■□□□□ 0.92
CAPN13-203ENST00000458085 TNS3Q68CZ2 1445 aa20.81■□□□□ 0.92
CAPN13-203ENST00000458085 RWDD1Q9H446 243 aaPredicted RBP20.8■□□□□ 0.92
CAPN13-203ENST00000458085 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
CAPN13-203ENST00000458085 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
CAPN13-203ENST00000458085 MSH5O43196 834 aa20.78■□□□□ 0.92
CAPN13-203ENST00000458085 LGR6Q9HBX8 967 aa20.78■□□□□ 0.92
CAPN13-203ENST00000458085 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
CAPN13-203ENST00000458085 ERBB3P21860 1342 aa20.78■□□□□ 0.92
CAPN13-203ENST00000458085 RGS12O14924 1447 aa20.77■□□□□ 0.92
CAPN13-203ENST00000458085 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.91
CAPN13-203ENST00000458085 TAF7Q15545 349 aaPredicted RBP20.76■□□□□ 0.91
CAPN13-203ENST00000458085 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
CAPN13-203ENST00000458085 PDZRN3Q9UPQ7 1066 aa20.76■□□□□ 0.91
CAPN13-203ENST00000458085 COL18A1P39060 1754 aa20.76■□□□□ 0.91
CAPN13-203ENST00000458085 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
CAPN13-203ENST00000458085 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
CAPN13-203ENST00000458085 HAP1P54257 671 aaPredicted RBP20.75■□□□□ 0.91
CAPN13-203ENST00000458085 HDAC1Q13547 482 aaPredicted RBP20.75■□□□□ 0.91
CAPN13-203ENST00000458085 SLAIN2Q9P270 581 aa20.75■□□□□ 0.91
CAPN13-203ENST00000458085 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
CAPN13-203ENST00000458085 CHRNA2Q15822 529 aa20.75■□□□□ 0.91
CAPN13-203ENST00000458085 PLEKHO1Q53GL0 409 aaPredicted RBP20.74■□□□□ 0.91
CAPN13-203ENST00000458085 C1orf115Q9H7X2 142 aa20.74■□□□□ 0.91
CAPN13-203ENST00000458085 LMO7Q8WWI1 1683 aa20.74■□□□□ 0.91
CAPN13-203ENST00000458085 C8orf34Q49A92 452 aa20.74■□□□□ 0.91
CAPN13-203ENST00000458085 G2E3Q7L622 706 aa20.74■□□□□ 0.91
CAPN13-203ENST00000458085 AKAP4Q5JQC9 854 aa20.73■□□□□ 0.91
CAPN13-203ENST00000458085 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
CAPN13-203ENST00000458085 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
CAPN13-203ENST00000458085 NECTIN2Q92692 538 aa20.71■□□□□ 0.91
CAPN13-203ENST00000458085 FAM161AQ3B820 660 aa20.7■□□□□ 0.9
CAPN13-203ENST00000458085 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
CAPN13-203ENST00000458085 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
CAPN13-203ENST00000458085 VIRMAQ69YN4 1812 aaKnown RBP20.7■□□□□ 0.9
CAPN13-203ENST00000458085 SOS2Q07890 1332 aaPredicted RBP20.69■□□□□ 0.9
CAPN13-203ENST00000458085 INTS3Q68E01 1043 aaKnown RBP20.69■□□□□ 0.9
CAPN13-203ENST00000458085 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
CAPN13-203ENST00000458085 PTPRCP08575 1304 aa20.69■□□□□ 0.9
CAPN13-203ENST00000458085 FAM208AQ9UK61 1670 aaKnown RBP20.69■□□□□ 0.9
CAPN13-203ENST00000458085 KCNQ3O43525 872 aa20.69■□□□□ 0.9
CAPN13-203ENST00000458085 RNMTO43148 476 aaKnown RBP20.68■□□□□ 0.9
CAPN13-203ENST00000458085 SMC5Q8IY18 1101 aa20.68■□□□□ 0.9
CAPN13-203ENST00000458085 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
CAPN13-203ENST00000458085 SIRT2Q8IXJ6 389 aa20.67■□□□□ 0.9
CAPN13-203ENST00000458085 KDM3BQ7LBC6 1761 aa20.66■□□□□ 0.9
CAPN13-203ENST00000458085 F6X3S4 739 aa20.66■□□□□ 0.9
CAPN13-203ENST00000458085 CPDO75976 1380 aa20.66■□□□□ 0.9
CAPN13-203ENST00000458085 MEGF6O75095 1541 aa20.65■□□□□ 0.9
CAPN13-203ENST00000458085 CSB-PGBD3P0DP91 1061 aa20.65■□□□□ 0.9
CAPN13-203ENST00000458085 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
CAPN13-203ENST00000458085 TEFQ10587 303 aa20.65■□□□□ 0.9
CAPN13-203ENST00000458085 CCDC30Q5VVM6 783 aa20.65■□□□□ 0.9
CAPN13-203ENST00000458085 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
CAPN13-203ENST00000458085 STK31Q9BXU1 1019 aa20.65■□□□□ 0.9
CAPN13-203ENST00000458085 CHMP4BQ9H444 224 aaKnown RBP20.65■□□□□ 0.9
CAPN13-203ENST00000458085 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
CAPN13-203ENST00000458085 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms