RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 FOXD4L6Q3SYB3 417 aaPredicted RBP24.15■■□□□ 1.46
CNEP1R1-203ENST00000458059 TPRNQ4KMQ1 711 aa24.15■■□□□ 1.46
CNEP1R1-203ENST00000458059 FOXD4L3Q6VB84 417 aaPredicted RBP24.15■■□□□ 1.46
CNEP1R1-203ENST00000458059 USP26Q9BXU7 913 aa24.15■■□□□ 1.46
CNEP1R1-203ENST00000458059 ANKRD44Q8N8A2 993 aa24.14■■□□□ 1.46
CNEP1R1-203ENST00000458059 EXOC6BQ9Y2D4 811 aa24.14■■□□□ 1.46
CNEP1R1-203ENST00000458059 DLG5Q8TDM6 1919 aa24.14■■□□□ 1.45
CNEP1R1-203ENST00000458059 CLTCQ00610 1675 aaKnown RBP24.13■■□□□ 1.45
CNEP1R1-203ENST00000458059 PRR36Q9H6K5 1346 aa24.13■■□□□ 1.45
CNEP1R1-203ENST00000458059 KNDC1Q76NI1 1749 aa24.13■■□□□ 1.45
CNEP1R1-203ENST00000458059 EDC4Q6P2E9 1401 aaKnown RBP24.13■■□□□ 1.45
CNEP1R1-203ENST00000458059 INTS3Q68E01 1043 aaKnown RBP24.13■■□□□ 1.45
CNEP1R1-203ENST00000458059 RBM27Q9P2N5 1060 aaKnown RBP24.13■■□□□ 1.45
CNEP1R1-203ENST00000458059 NASPP49321 788 aaPredicted RBP24.12■■□□□ 1.45
CNEP1R1-203ENST00000458059 RABEP1Q15276 862 aa24.12■■□□□ 1.45
CNEP1R1-203ENST00000458059 SKOR2Q2VWA4 1001 aaPredicted RBP24.12■■□□□ 1.45
CNEP1R1-203ENST00000458059 ATP7BP35670 1465 aa24.12■■□□□ 1.45
CNEP1R1-203ENST00000458059 PRPF40AO75400 957 aaKnown RBP24.11■■□□□ 1.45
CNEP1R1-203ENST00000458059 RICTORQ6R327 1708 aa24.11■■□□□ 1.45
CNEP1R1-203ENST00000458059 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.1■■□□□ 1.45
CNEP1R1-203ENST00000458059 CDC42BPGQ6DT37 1551 aa24.09■■□□□ 1.45
CNEP1R1-203ENST00000458059 CPSF1Q10570 1443 aaKnown RBP24.09■■□□□ 1.45
CNEP1R1-203ENST00000458059 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
CNEP1R1-203ENST00000458059 CDK12Q9NYV4 1490 aaPredicted RBP24.08■■□□□ 1.45
CNEP1R1-203ENST00000458059 RTL1A6NKG5 1358 aa24.08■■□□□ 1.45
CNEP1R1-203ENST00000458059 ATP10DQ9P241 1426 aa24.08■■□□□ 1.44
CNEP1R1-203ENST00000458059 ESF1Q9H501 851 aaKnown RBP24.08■■□□□ 1.44
CNEP1R1-203ENST00000458059 CASC1Q6TDU7 716 aa24.07■■□□□ 1.44
CNEP1R1-203ENST00000458059 TSPYL4Q9UJ04 414 aa24.07■■□□□ 1.44
CNEP1R1-203ENST00000458059 CHL1O00533 1208 aa24.06■■□□□ 1.44
CNEP1R1-203ENST00000458059 RPAP2Q8IXW5 612 aaPredicted RBP24.06■■□□□ 1.44
CNEP1R1-203ENST00000458059 NUTM2GQ5VZR2 741 aa24.05■■□□□ 1.44
CNEP1R1-203ENST00000458059 RILPL2Q969X0 211 aa24.05■■□□□ 1.44
CNEP1R1-203ENST00000458059 ACEP12821 1306 aa24.05■■□□□ 1.44
CNEP1R1-203ENST00000458059 NEK4P51957 841 aa24.05■■□□□ 1.44
CNEP1R1-203ENST00000458059 KLHL40Q2TBA0 621 aa24.05■■□□□ 1.44
CNEP1R1-203ENST00000458059 ST18O60284 1047 aa24.04■■□□□ 1.44
CNEP1R1-203ENST00000458059 RGS12O14924 1447 aa24.04■■□□□ 1.44
CNEP1R1-203ENST00000458059 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
CNEP1R1-203ENST00000458059 TRIM6-TRIM34B2RNG4 842 aa24.03■■□□□ 1.44
CNEP1R1-203ENST00000458059 ANP32BQ92688 251 aaKnown RBP24.03■■□□□ 1.44
CNEP1R1-203ENST00000458059 TSPOAP1O95153 1857 aa24.03■■□□□ 1.44
CNEP1R1-203ENST00000458059 TTC21BQ7Z4L5 1316 aa24.03■■□□□ 1.44
CNEP1R1-203ENST00000458059 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
CNEP1R1-203ENST00000458059 MTHFSDQ2M296 383 aaKnown RBP24.02■■□□□ 1.44
CNEP1R1-203ENST00000458059 ZSCAN23Q3MJ62 389 aa24.02■■□□□ 1.44
CNEP1R1-203ENST00000458059 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
CNEP1R1-203ENST00000458059 LMBRD1Q9NUN5 540 aa24.02■■□□□ 1.44
CNEP1R1-203ENST00000458059 NSFL1CQ9UNZ2 370 aaKnown RBP24.02■■□□□ 1.44
CNEP1R1-203ENST00000458059 PLEKHG5O94827 1062 aa24.02■■□□□ 1.44
CNEP1R1-203ENST00000458059 DTNBO60941 627 aa24.01■■□□□ 1.43
CNEP1R1-203ENST00000458059 LTV1Q96GA3 475 aaPredicted RBP24.01■■□□□ 1.43
CNEP1R1-203ENST00000458059 AATKQ6ZMQ8 1374 aa24.01■■□□□ 1.43
CNEP1R1-203ENST00000458059 NUCB2P80303 420 aa24.01■■□□□ 1.43
CNEP1R1-203ENST00000458059 ERC2O15083 957 aa24■■□□□ 1.43
CNEP1R1-203ENST00000458059 PDE1AP54750 535 aa24■■□□□ 1.43
CNEP1R1-203ENST00000458059 ISY1Q9ULR0 285 aaKnown RBP24■■□□□ 1.43
CNEP1R1-203ENST00000458059 ZDHHC9Q9Y397 364 aa24■■□□□ 1.43
CNEP1R1-203ENST00000458059 MAP3K19Q56UN5 1328 aa24■■□□□ 1.43
CNEP1R1-203ENST00000458059 PRIM1P49642 420 aaKnown RBP24■■□□□ 1.43
CNEP1R1-203ENST00000458059 MAP4K4O95819 1239 aaPredicted RBP24■■□□□ 1.43
CNEP1R1-203ENST00000458059 FKBP5Q13451 457 aaPredicted RBP24■■□□□ 1.43
CNEP1R1-203ENST00000458059 RNF214Q8ND24 703 aa24■■□□□ 1.43
CNEP1R1-203ENST00000458059 RBSNQ9H1K0 784 aa24■■□□□ 1.43
CNEP1R1-203ENST00000458059 REC8O95072 547 aa23.99■■□□□ 1.43
CNEP1R1-203ENST00000458059 UPF3BQ9BZI7 483 aaKnown RBP23.99■■□□□ 1.43
CNEP1R1-203ENST00000458059 ANO2Q9NQ90 1003 aa23.99■■□□□ 1.43
CNEP1R1-203ENST00000458059 PALD1Q9ULE6 856 aa23.99■■□□□ 1.43
CNEP1R1-203ENST00000458059 GPT2Q8TD30 523 aa23.99■■□□□ 1.43
CNEP1R1-203ENST00000458059 PNMA6EA0A0J9YXQ4 647 aa23.98■■□□□ 1.43
CNEP1R1-203ENST00000458059 IL1RAPL2Q9NP60 686 aa23.98■■□□□ 1.43
CNEP1R1-203ENST00000458059 ROBO2Q9HCK4 1378 aa23.97■■□□□ 1.43
CNEP1R1-203ENST00000458059 SYCE3A1L190 88 aa23.97■■□□□ 1.43
CNEP1R1-203ENST00000458059 HMMRO75330 724 aa23.97■■□□□ 1.43
CNEP1R1-203ENST00000458059 PTMSP20962 102 aa23.97■■□□□ 1.43
CNEP1R1-203ENST00000458059 UBE2Q2Q8WVN8 375 aa23.97■■□□□ 1.43
CNEP1R1-203ENST00000458059 GDPD2Q9HCC8 539 aa23.96■■□□□ 1.43
CNEP1R1-203ENST00000458059 CCDC173Q0VFZ6 552 aa23.96■■□□□ 1.43
CNEP1R1-203ENST00000458059 MPNDQ8N594 471 aa23.96■■□□□ 1.43
CNEP1R1-203ENST00000458059 LARP6Q9BRS8 491 aaKnown RBP23.96■■□□□ 1.43
CNEP1R1-203ENST00000458059 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.42
CNEP1R1-203ENST00000458059 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.42
CNEP1R1-203ENST00000458059 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.42
CNEP1R1-203ENST00000458059 AMPHP49418 695 aa23.95■■□□□ 1.42
CNEP1R1-203ENST00000458059 PTPRCP08575 1304 aa23.95■■□□□ 1.42
CNEP1R1-203ENST00000458059 TMX3Q96JJ7 454 aa23.94■■□□□ 1.42
CNEP1R1-203ENST00000458059 CYP2E1P05181 493 aaPredicted RBP23.94■■□□□ 1.42
CNEP1R1-203ENST00000458059 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
CNEP1R1-203ENST00000458059 STK31Q9BXU1 1019 aa23.94■■□□□ 1.42
CNEP1R1-203ENST00000458059 HSP90AA2PQ14568 343 aaPredicted RBP23.93■■□□□ 1.42
CNEP1R1-203ENST00000458059 GNAI2P04899 355 aa23.93■■□□□ 1.42
CNEP1R1-203ENST00000458059 MSNP26038 577 aaKnown RBP23.93■■□□□ 1.42
CNEP1R1-203ENST00000458059 TMEM63CQ9P1W3 806 aa23.93■■□□□ 1.42
CNEP1R1-203ENST00000458059 HAP1P54257 671 aaPredicted RBP23.92■■□□□ 1.42
CNEP1R1-203ENST00000458059 LRRFIP2Q9Y608 721 aaKnown RBP23.92■■□□□ 1.42
CNEP1R1-203ENST00000458059 NUTM1Q86Y26 1132 aa23.91■■□□□ 1.42
CNEP1R1-203ENST00000458059 DLC1Q96QB1 1528 aa23.91■■□□□ 1.42
CNEP1R1-203ENST00000458059 KIAA1211Q6ZU35 1233 aa23.91■■□□□ 1.42
CNEP1R1-203ENST00000458059 RIMS1Q86UR5 1692 aaKnown RBP23.91■■□□□ 1.42
CNEP1R1-203ENST00000458059 NGDNQ8NEJ9 315 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms