RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
LINC01888-202ENST00000457602 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.47
LINC01888-202ENST00000457602 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
LINC01888-202ENST00000457602 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
LINC01888-202ENST00000457602 SAFB2Q14151 953 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC01888-202ENST00000457602 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
LINC01888-202ENST00000457602 PXDNQ92626 1479 aa12.08□□□□□ -0.48
LINC01888-202ENST00000457602 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
LINC01888-202ENST00000457602 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
LINC01888-202ENST00000457602 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
LINC01888-202ENST00000457602 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
LINC01888-202ENST00000457602 MYOM2P54296 1465 aa12.07□□□□□ -0.48
LINC01888-202ENST00000457602 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
LINC01888-202ENST00000457602 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
LINC01888-202ENST00000457602 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
LINC01888-202ENST00000457602 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
LINC01888-202ENST00000457602 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
LINC01888-202ENST00000457602 POGKQ9P215 609 aa12.05□□□□□ -0.48
LINC01888-202ENST00000457602 FMN2Q9NZ56 1722 aa12.05□□□□□ -0.48
LINC01888-202ENST00000457602 MAP3K7O43318 606 aa12.04□□□□□ -0.48
LINC01888-202ENST00000457602 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
LINC01888-202ENST00000457602 SPATA31A3Q5VYP0 1347 aa12.04□□□□□ -0.48
LINC01888-202ENST00000457602 ATAD2Q6PL18 1390 aa12.04□□□□□ -0.48
LINC01888-202ENST00000457602 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
LINC01888-202ENST00000457602 ATRNO75882 1429 aa12.03□□□□□ -0.48
LINC01888-202ENST00000457602 NRXN1Q9ULB1 1477 aa12.03□□□□□ -0.48
LINC01888-202ENST00000457602 PSME1Q06323 249 aa12.03□□□□□ -0.48
LINC01888-202ENST00000457602 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
LINC01888-202ENST00000457602 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
LINC01888-202ENST00000457602 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.49
LINC01888-202ENST00000457602 DCAF11Q8TEB1 546 aa12.01□□□□□ -0.49
LINC01888-202ENST00000457602 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
LINC01888-202ENST00000457602 MARF1Q9Y4F3 1742 aaKnown RBP12□□□□□ -0.49
LINC01888-202ENST00000457602 UNC5CLQ8IV45 518 aa12□□□□□ -0.49
LINC01888-202ENST00000457602 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
LINC01888-202ENST00000457602 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
LINC01888-202ENST00000457602 STAC3Q96MF2 364 aa12□□□□□ -0.49
LINC01888-202ENST00000457602 HIRIP3Q9BW71 556 aaPredicted RBP12□□□□□ -0.49
LINC01888-202ENST00000457602 CDHR5Q9HBB8 845 aa12□□□□□ -0.49
LINC01888-202ENST00000457602 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
LINC01888-202ENST00000457602 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
LINC01888-202ENST00000457602 SEMA3EO15041 775 aa11.99□□□□□ -0.49
LINC01888-202ENST00000457602 RABGEF1Q9UJ41 708 aa11.99□□□□□ -0.49
LINC01888-202ENST00000457602 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
LINC01888-202ENST00000457602 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
LINC01888-202ENST00000457602 SBNO1A3KN83 1393 aa11.98□□□□□ -0.49
LINC01888-202ENST00000457602 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
LINC01888-202ENST00000457602 CCDC9Q9Y3X0 531 aaKnown RBP11.98□□□□□ -0.49
LINC01888-202ENST00000457602 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
LINC01888-202ENST00000457602 ARHGEF10O15013 1369 aa11.97□□□□□ -0.49
LINC01888-202ENST00000457602 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
LINC01888-202ENST00000457602 ADGRB1O14514 1584 aa11.96□□□□□ -0.49
LINC01888-202ENST00000457602 SLIT2O94813 1529 aa11.96□□□□□ -0.49
LINC01888-202ENST00000457602 TRIM6-TRIM34B2RNG4 842 aa11.96□□□□□ -0.49
LINC01888-202ENST00000457602 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
LINC01888-202ENST00000457602 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
LINC01888-202ENST00000457602 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
LINC01888-202ENST00000457602 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
LINC01888-202ENST00000457602 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
LINC01888-202ENST00000457602 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
LINC01888-202ENST00000457602 NPDC1Q9NQX5 325 aaPredicted RBP11.95□□□□□ -0.5
LINC01888-202ENST00000457602 ADGRB2O60241 1585 aa11.94□□□□□ -0.5
LINC01888-202ENST00000457602 WASLO00401 505 aaPredicted RBP11.94□□□□□ -0.5
LINC01888-202ENST00000457602 HRCP23327 699 aa11.94□□□□□ -0.5
LINC01888-202ENST00000457602 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
LINC01888-202ENST00000457602 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
LINC01888-202ENST00000457602 TSKSQ9UJT2 592 aa11.94□□□□□ -0.5
LINC01888-202ENST00000457602 GLI3P10071 1580 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 PRR36Q9H6K5 1346 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 TULP4Q9NRJ4 1543 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 A0A0G2JS52 829 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 MYT1Q01538 1121 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 VPS72Q15906 364 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
LINC01888-202ENST00000457602 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
LINC01888-202ENST00000457602 PRSS12P56730 875 aa11.92□□□□□ -0.5
LINC01888-202ENST00000457602 SEPT12Q8IYM1 358 aa11.92□□□□□ -0.5
LINC01888-202ENST00000457602 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
LINC01888-202ENST00000457602 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
LINC01888-202ENST00000457602 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
LINC01888-202ENST00000457602 CDCA7LQ96GN5 454 aa11.91□□□□□ -0.5
LINC01888-202ENST00000457602 ABCA3Q99758 1704 aa11.9□□□□□ -0.5
LINC01888-202ENST00000457602 BTG4Q9NY30 223 aa11.9□□□□□ -0.5
LINC01888-202ENST00000457602 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
LINC01888-202ENST00000457602 TRPM3Q9HCF6 1732 aaPredicted RBP11.89□□□□□ -0.51
LINC01888-202ENST00000457602 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
LINC01888-202ENST00000457602 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
LINC01888-202ENST00000457602 KRT27Q7Z3Y8 459 aa11.89□□□□□ -0.51
LINC01888-202ENST00000457602 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
LINC01888-202ENST00000457602 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
LINC01888-202ENST00000457602 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
LINC01888-202ENST00000457602 FAM98CQ17RN3 349 aaKnown RBP11.88□□□□□ -0.51
LINC01888-202ENST00000457602 DEFB132Q7Z7B7 95 aa11.88□□□□□ -0.51
LINC01888-202ENST00000457602 LAPTM4BQ86VI4 370 aa11.88□□□□□ -0.51
LINC01888-202ENST00000457602 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
LINC01888-202ENST00000457602 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
LINC01888-202ENST00000457602 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
LINC01888-202ENST00000457602 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
LINC01888-202ENST00000457602 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms