RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
NT5C3A-208ENST00000456458 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
NT5C3A-208ENST00000456458 CRB1P82279 1406 aa18.25■□□□□ 0.51
NT5C3A-208ENST00000456458 HSP90AB2PQ58FF8 381 aa18.25■□□□□ 0.51
NT5C3A-208ENST00000456458 SPRYD3Q8NCJ5 442 aa18.25■□□□□ 0.51
NT5C3A-208ENST00000456458 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
NT5C3A-208ENST00000456458 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
NT5C3A-208ENST00000456458 DDIT3P35638 169 aa18.24■□□□□ 0.51
NT5C3A-208ENST00000456458 GAS2L2Q8NHY3 880 aa18.24■□□□□ 0.51
NT5C3A-208ENST00000456458 RGS12O14924 1447 aa18.24■□□□□ 0.51
NT5C3A-208ENST00000456458 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
NT5C3A-208ENST00000456458 MCM10Q7L590 875 aa18.23■□□□□ 0.51
NT5C3A-208ENST00000456458 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
NT5C3A-208ENST00000456458 HMMRO75330 724 aa18.23■□□□□ 0.51
NT5C3A-208ENST00000456458 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
NT5C3A-208ENST00000456458 FMN2Q9NZ56 1722 aa18.23■□□□□ 0.51
NT5C3A-208ENST00000456458 KDRP35968 1356 aa18.22■□□□□ 0.51
NT5C3A-208ENST00000456458 TTC22Q5TAA0 569 aa18.22■□□□□ 0.51
NT5C3A-208ENST00000456458 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
NT5C3A-208ENST00000456458 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
NT5C3A-208ENST00000456458 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
NT5C3A-208ENST00000456458 SOS1Q07889 1333 aaPredicted RBP18.21■□□□□ 0.51
NT5C3A-208ENST00000456458 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
NT5C3A-208ENST00000456458 CCT4P50991 539 aaKnown RBP18.21■□□□□ 0.51
NT5C3A-208ENST00000456458 CEP85Q6P2H3 762 aa18.21■□□□□ 0.51
NT5C3A-208ENST00000456458 GBP4Q96PP9 640 aa18.21■□□□□ 0.51
NT5C3A-208ENST00000456458 ANKARQ7Z5J8 1434 aa18.21■□□□□ 0.51
NT5C3A-208ENST00000456458 K7ELQ4 463 aaPredicted RBP18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 NGDNQ8NEJ9 315 aaKnown RBP18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 KIF2CQ99661 725 aa18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 TRAK2O60296 914 aa18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 TSPYL4Q9UJ04 414 aa18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
NT5C3A-208ENST00000456458 IGSF1Q8N6C5 1336 aa18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 AMPHP49418 695 aa18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 RABEP1Q15276 862 aa18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 MSH6P52701 1360 aa18.19■□□□□ 0.5
NT5C3A-208ENST00000456458 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
NT5C3A-208ENST00000456458 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
NT5C3A-208ENST00000456458 HSP90AA1P07900 732 aaKnown RBP18.18■□□□□ 0.5
NT5C3A-208ENST00000456458 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
NT5C3A-208ENST00000456458 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
NT5C3A-208ENST00000456458 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
NT5C3A-208ENST00000456458 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
NT5C3A-208ENST00000456458 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
NT5C3A-208ENST00000456458 SKOR2Q2VWA4 1001 aaPredicted RBP18.17■□□□□ 0.5
NT5C3A-208ENST00000456458 FAM43AQ8N2R8 423 aa18.16■□□□□ 0.5
NT5C3A-208ENST00000456458 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
NT5C3A-208ENST00000456458 FSD2A1L4K1 749 aa18.15■□□□□ 0.5
NT5C3A-208ENST00000456458 EYA1Q99502 592 aa18.15■□□□□ 0.5
NT5C3A-208ENST00000456458 MEIS3Q99687 375 aa18.15■□□□□ 0.5
NT5C3A-208ENST00000456458 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
NT5C3A-208ENST00000456458 CCDC30Q5VVM6 783 aa18.14■□□□□ 0.49
NT5C3A-208ENST00000456458 SOX12O15370 315 aa18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 REC8O95072 547 aa18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 TNPO1Q92973 898 aaKnown RBP18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 OSBPL3Q9H4L5 887 aa18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 RTN4Q9NQC3 1192 aaKnown RBP18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 PIK3C2AO00443 1686 aa18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 XRN1Q8IZH2 1706 aaKnown RBP18.13■□□□□ 0.49
NT5C3A-208ENST00000456458 GNAI2P04899 355 aa18.12■□□□□ 0.49
NT5C3A-208ENST00000456458 USP26Q9BXU7 913 aa18.12■□□□□ 0.49
NT5C3A-208ENST00000456458 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
NT5C3A-208ENST00000456458 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
NT5C3A-208ENST00000456458 GNAI3P08754 354 aa18.12■□□□□ 0.49
NT5C3A-208ENST00000456458 GOLGA6L22H0YM25 854 aa18.11■□□□□ 0.49
NT5C3A-208ENST00000456458 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
NT5C3A-208ENST00000456458 MRE11P49959 708 aa18.11■□□□□ 0.49
NT5C3A-208ENST00000456458 NLRP6P59044 892 aa18.11■□□□□ 0.49
NT5C3A-208ENST00000456458 CEP170BQ9Y4F5 1589 aaPredicted RBP18.11■□□□□ 0.49
NT5C3A-208ENST00000456458 FOXO3O43524 673 aa18.1■□□□□ 0.49
NT5C3A-208ENST00000456458 SDSP20132 328 aa18.1■□□□□ 0.49
NT5C3A-208ENST00000456458 CLEC17AQ6ZS10 378 aa18.1■□□□□ 0.49
NT5C3A-208ENST00000456458 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
NT5C3A-208ENST00000456458 CHMP4AQ9BY43 222 aa18.1■□□□□ 0.49
NT5C3A-208ENST00000456458 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
NT5C3A-208ENST00000456458 HOXC9P31274 260 aa18.09■□□□□ 0.49
NT5C3A-208ENST00000456458 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
NT5C3A-208ENST00000456458 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
NT5C3A-208ENST00000456458 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
NT5C3A-208ENST00000456458 FER1L4A9Z1Z3 1794 aa18.08■□□□□ 0.49
NT5C3A-208ENST00000456458 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.49
NT5C3A-208ENST00000456458 MAP3K5Q99683 1374 aa18.08■□□□□ 0.48
NT5C3A-208ENST00000456458 ST18O60284 1047 aa18.08■□□□□ 0.48
NT5C3A-208ENST00000456458 NUCB2P80303 420 aa18.08■□□□□ 0.48
NT5C3A-208ENST00000456458 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.48
NT5C3A-208ENST00000456458 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
NT5C3A-208ENST00000456458 ERC2O15083 957 aa18.07■□□□□ 0.48
NT5C3A-208ENST00000456458 CD2BP2O95400 341 aaKnown RBP18.07■□□□□ 0.48
NT5C3A-208ENST00000456458 G2E3Q7L622 706 aa18.07■□□□□ 0.48
NT5C3A-208ENST00000456458 FLIIQ13045 1269 aa18.06■□□□□ 0.48
NT5C3A-208ENST00000456458 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
NT5C3A-208ENST00000456458 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
NT5C3A-208ENST00000456458 GZF1Q9H116 711 aaPredicted RBP18.06■□□□□ 0.48
NT5C3A-208ENST00000456458 SMARCA5O60264 1052 aaPredicted RBP18.06■□□□□ 0.48
NT5C3A-208ENST00000456458 XRCC6P12956 609 aaKnown RBP eCLIP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms