RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 DEFB132Q7Z7B7 95 aa19.02■□□□□ 0.64
LINC01563-201ENST00000456235 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.64
LINC01563-201ENST00000456235 ACSBG1Q96GR2 724 aa19.02■□□□□ 0.64
LINC01563-201ENST00000456235 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.63
LINC01563-201ENST00000456235 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
LINC01563-201ENST00000456235 TATP17735 454 aaPredicted RBP19.01■□□□□ 0.63
LINC01563-201ENST00000456235 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
LINC01563-201ENST00000456235 HMOX1P09601 288 aa19■□□□□ 0.63
LINC01563-201ENST00000456235 FAM196AQ6ZSG2 479 aa19■□□□□ 0.63
LINC01563-201ENST00000456235 KAT6BQ8WYB5 2073 aa19■□□□□ 0.63
LINC01563-201ENST00000456235 BTAF1O14981 1849 aa18.98■□□□□ 0.63
LINC01563-201ENST00000456235 U2SURPO15042 1029 aaKnown RBP18.98■□□□□ 0.63
LINC01563-201ENST00000456235 DIAPH1O60610 1272 aaKnown RBP18.98■□□□□ 0.63
LINC01563-201ENST00000456235 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
LINC01563-201ENST00000456235 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
LINC01563-201ENST00000456235 KCNQ2O43526 872 aa18.96■□□□□ 0.63
LINC01563-201ENST00000456235 SF3B2Q13435 895 aaKnown RBP18.96■□□□□ 0.63
LINC01563-201ENST00000456235 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
LINC01563-201ENST00000456235 EN1Q05925 392 aaPredicted RBP18.94■□□□□ 0.62
LINC01563-201ENST00000456235 ITGB4P16144 1822 aa18.94■□□□□ 0.62
LINC01563-201ENST00000456235 CYP27B1O15528 508 aa18.93■□□□□ 0.62
LINC01563-201ENST00000456235 APBA3O96018 575 aa18.93■□□□□ 0.62
LINC01563-201ENST00000456235 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
LINC01563-201ENST00000456235 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
LINC01563-201ENST00000456235 RREB1Q92766 1687 aa18.92■□□□□ 0.62
LINC01563-201ENST00000456235 NUP188Q5SRE5 1749 aa18.92■□□□□ 0.62
LINC01563-201ENST00000456235 SYTL4Q96C24 671 aaPredicted RBP18.92■□□□□ 0.62
LINC01563-201ENST00000456235 CFAP53Q96M91 514 aa18.92■□□□□ 0.62
LINC01563-201ENST00000456235 KDRP35968 1356 aa18.91■□□□□ 0.62
LINC01563-201ENST00000456235 EZH2Q15910 746 aaKnown RBP18.9■□□□□ 0.62
LINC01563-201ENST00000456235 BAG6P46379 1132 aa18.89■□□□□ 0.61
LINC01563-201ENST00000456235 RALBP1Q15311 655 aa18.89■□□□□ 0.61
LINC01563-201ENST00000456235 SPG7Q9UQ90 795 aa18.89■□□□□ 0.61
LINC01563-201ENST00000456235 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
LINC01563-201ENST00000456235 CCDC125Q86Z20 511 aa18.88■□□□□ 0.61
LINC01563-201ENST00000456235 PRKRIP1Q9H875 184 aaPredicted RBP18.88■□□□□ 0.61
LINC01563-201ENST00000456235 MYBBP1AQ9BQG0 1328 aaKnown RBP18.88■□□□□ 0.61
LINC01563-201ENST00000456235 BCL9O00512 1426 aa18.88■□□□□ 0.61
LINC01563-201ENST00000456235 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
LINC01563-201ENST00000456235 RGPD3A6NKT7 1758 aaPredicted RBP18.86■□□□□ 0.61
LINC01563-201ENST00000456235 RGPD4Q7Z3J3 1758 aa18.86■□□□□ 0.61
LINC01563-201ENST00000456235 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
LINC01563-201ENST00000456235 PHKG2P15735 406 aa18.86■□□□□ 0.61
LINC01563-201ENST00000456235 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
LINC01563-201ENST00000456235 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
LINC01563-201ENST00000456235 KDM6AO15550 1401 aaPredicted RBP18.85■□□□□ 0.61
LINC01563-201ENST00000456235 SCN11AQ9UI33 1791 aa18.85■□□□□ 0.61
LINC01563-201ENST00000456235 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
LINC01563-201ENST00000456235 PLEKHO1Q53GL0 409 aaPredicted RBP18.84■□□□□ 0.61
LINC01563-201ENST00000456235 CAMKK2Q96RR4 588 aa18.84■□□□□ 0.61
LINC01563-201ENST00000456235 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.6
LINC01563-201ENST00000456235 MPRIPQ6WCQ1 1025 aa18.83■□□□□ 0.6
LINC01563-201ENST00000456235 IFNL2Q8IZJ0 200 aa18.83■□□□□ 0.6
LINC01563-201ENST00000456235 RSPH6AQ9H0K4 717 aa18.83■□□□□ 0.6
LINC01563-201ENST00000456235 KCNQ4P56696 695 aa18.82■□□□□ 0.6
LINC01563-201ENST00000456235 PHACTR3Q96KR7 559 aa18.82■□□□□ 0.6
LINC01563-201ENST00000456235 NUDCQ9Y266 331 aa18.82■□□□□ 0.6
LINC01563-201ENST00000456235 LY75O60449 1722 aa18.82■□□□□ 0.6
LINC01563-201ENST00000456235 DLG5Q8TDM6 1919 aa18.81■□□□□ 0.6
LINC01563-201ENST00000456235 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
LINC01563-201ENST00000456235 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
LINC01563-201ENST00000456235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
LINC01563-201ENST00000456235 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
LINC01563-201ENST00000456235 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
LINC01563-201ENST00000456235 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
LINC01563-201ENST00000456235 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
LINC01563-201ENST00000456235 PROM2Q8N271 834 aa18.77■□□□□ 0.6
LINC01563-201ENST00000456235 ADAMTS7Q9UKP4 1686 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 PAPPAQ13219 1627 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 ANP32CO43423 234 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 TXNRD1Q16881 649 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 PIGBQ92521 554 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 LGR6Q9HBX8 967 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 C5P01031 1676 aa18.76■□□□□ 0.59
LINC01563-201ENST00000456235 SENP3-EIF4A1A0A087X0R7 540 aa18.75■□□□□ 0.59
LINC01563-201ENST00000456235 TMOD3Q9NYL9 352 aa18.75■□□□□ 0.59
LINC01563-201ENST00000456235 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
LINC01563-201ENST00000456235 SIPA1L3O60292 1781 aaPredicted RBP18.74■□□□□ 0.59
LINC01563-201ENST00000456235 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
LINC01563-201ENST00000456235 MAP3K5Q99683 1374 aa18.74■□□□□ 0.59
LINC01563-201ENST00000456235 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
LINC01563-201ENST00000456235 ANO8Q9HCE9 1232 aaPredicted RBP18.74■□□□□ 0.59
LINC01563-201ENST00000456235 TAF1LQ8IZX4 1826 aa18.74■□□□□ 0.59
LINC01563-201ENST00000456235 PLSCR1O15162 318 aa18.73■□□□□ 0.59
LINC01563-201ENST00000456235 R3HDM1Q15032 1099 aaKnown RBP18.73■□□□□ 0.59
LINC01563-201ENST00000456235 DCAF5Q96JK2 942 aa18.73■□□□□ 0.59
LINC01563-201ENST00000456235 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
LINC01563-201ENST00000456235 CABP4P57796 275 aa18.72■□□□□ 0.59
LINC01563-201ENST00000456235 ASAP1Q9ULH1 1129 aa18.72■□□□□ 0.59
LINC01563-201ENST00000456235 MRC1P22897 1456 aa18.71■□□□□ 0.59
LINC01563-201ENST00000456235 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
LINC01563-201ENST00000456235 FCHSD2O94868 740 aa18.71■□□□□ 0.59
LINC01563-201ENST00000456235 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
LINC01563-201ENST00000456235 DCTN1Q14203 1278 aa18.71■□□□□ 0.59
LINC01563-201ENST00000456235 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC01563-201ENST00000456235 NFATC2IPQ8NCF5 419 aa18.7■□□□□ 0.58
LINC01563-201ENST00000456235 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
LINC01563-201ENST00000456235 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
LINC01563-201ENST00000456235 MCM10Q7L590 875 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms