RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
TOP3B-212ENST00000456075 SPG7Q9UQ90 795 aa13.98□□□□□ -0.17
TOP3B-212ENST00000456075 PARD3Q8TEW0 1356 aa13.97□□□□□ -0.17
TOP3B-212ENST00000456075 SYTL4Q96C24 671 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-212ENST00000456075 TNS1Q9HBL0 1735 aaKnown RBP13.97□□□□□ -0.17
TOP3B-212ENST00000456075 EZH2Q15910 746 aaKnown RBP13.96□□□□□ -0.17
TOP3B-212ENST00000456075 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
TOP3B-212ENST00000456075 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
TOP3B-212ENST00000456075 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
TOP3B-212ENST00000456075 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
TOP3B-212ENST00000456075 NCAPD2Q15021 1401 aa13.94□□□□□ -0.18
TOP3B-212ENST00000456075 KCNQ2O43526 872 aa13.93□□□□□ -0.18
TOP3B-212ENST00000456075 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
TOP3B-212ENST00000456075 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
TOP3B-212ENST00000456075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.186e-7■■□□□ 11.4
TOP3B-212ENST00000456075 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
TOP3B-212ENST00000456075 U2SURPO15042 1029 aaKnown RBP13.92□□□□□ -0.18
TOP3B-212ENST00000456075 PLSCR1O15162 318 aa13.92□□□□□ -0.18
TOP3B-212ENST00000456075 IL13P35225 146 aa13.92□□□□□ -0.18
TOP3B-212ENST00000456075 PLEKHO1Q53GL0 409 aaPredicted RBP13.92□□□□□ -0.18
TOP3B-212ENST00000456075 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
TOP3B-212ENST00000456075 PTF1AQ7RTS3 328 aa13.92□□□□□ -0.18
TOP3B-212ENST00000456075 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
TOP3B-212ENST00000456075 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
TOP3B-212ENST00000456075 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
TOP3B-212ENST00000456075 AEBP1Q8IUX7 1158 aa13.91□□□□□ -0.18
TOP3B-212ENST00000456075 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
TOP3B-212ENST00000456075 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
TOP3B-212ENST00000456075 KAT6BQ8WYB5 2073 aa13.91□□□□□ -0.18
TOP3B-212ENST00000456075 CYP27B1O15528 508 aa13.9□□□□□ -0.18
TOP3B-212ENST00000456075 PPP2R1AP30153 589 aa13.9□□□□□ -0.18
TOP3B-212ENST00000456075 NUDCQ9Y266 331 aa13.9□□□□□ -0.18
TOP3B-212ENST00000456075 HMOX1P09601 288 aa13.89□□□□□ -0.19
TOP3B-212ENST00000456075 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
TOP3B-212ENST00000456075 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
TOP3B-212ENST00000456075 PKD1L3Q7Z443 1732 aa13.88□□□□□ -0.19
TOP3B-212ENST00000456075 DOT1LQ8TEK3 1739 aa13.88□□□□□ -0.19
TOP3B-212ENST00000456075 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
TOP3B-212ENST00000456075 ZNF530Q6P9A1 599 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-212ENST00000456075 KDRP35968 1356 aa13.87□□□□□ -0.19
TOP3B-212ENST00000456075 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
TOP3B-212ENST00000456075 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
TOP3B-212ENST00000456075 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
TOP3B-212ENST00000456075 PHKG2P15735 406 aa13.87□□□□□ -0.19
TOP3B-212ENST00000456075 R3HDM1Q15032 1099 aaKnown RBP13.87□□□□□ -0.19
TOP3B-212ENST00000456075 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
TOP3B-212ENST00000456075 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
TOP3B-212ENST00000456075 RALBP1Q15311 655 aa13.86□□□□□ -0.19
TOP3B-212ENST00000456075 BTAF1O14981 1849 aa13.85□□□□□ -0.19
TOP3B-212ENST00000456075 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
TOP3B-212ENST00000456075 TMOD3Q9NYL9 352 aa13.85□□□□□ -0.19
TOP3B-212ENST00000456075 RREB1Q92766 1687 aa13.85□□□□□ -0.19
TOP3B-212ENST00000456075 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-212ENST00000456075 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-212ENST00000456075 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
TOP3B-212ENST00000456075 DCAF5Q96JK2 942 aa13.84□□□□□ -0.19
TOP3B-212ENST00000456075 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
TOP3B-212ENST00000456075 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-212ENST00000456075 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.19
TOP3B-212ENST00000456075 SLC27A3Q5K4L6 730 aa13.83□□□□□ -0.2
TOP3B-212ENST00000456075 SMARCC1Q92922 1105 aaPredicted RBP13.83□□□□□ -0.2
TOP3B-212ENST00000456075 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.2
TOP3B-212ENST00000456075 NEFMP07197 916 aa13.82□□□□□ -0.2
TOP3B-212ENST00000456075 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
TOP3B-212ENST00000456075 PROM2Q8N271 834 aa13.82□□□□□ -0.2
TOP3B-212ENST00000456075 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-212ENST00000456075 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
TOP3B-212ENST00000456075 CABP4P57796 275 aa13.81□□□□□ -0.2
TOP3B-212ENST00000456075 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
TOP3B-212ENST00000456075 PIGBQ92521 554 aa13.81□□□□□ -0.2
TOP3B-212ENST00000456075 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
TOP3B-212ENST00000456075 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
TOP3B-212ENST00000456075 GAS2L2Q8NHY3 880 aa13.8□□□□□ -0.2
TOP3B-212ENST00000456075 MYBBP1AQ9BQG0 1328 aaKnown RBP13.8□□□□□ -0.2
TOP3B-212ENST00000456075 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
TOP3B-212ENST00000456075 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
TOP3B-212ENST00000456075 TOGARAM1Q9Y4F4 1720 aa13.78□□□□□ -0.2
TOP3B-212ENST00000456075 FCHSD2O94868 740 aa13.78□□□□□ -0.2
TOP3B-212ENST00000456075 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
TOP3B-212ENST00000456075 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
TOP3B-212ENST00000456075 KDM6AO15550 1401 aaPredicted RBP13.77□□□□□ -0.21
TOP3B-212ENST00000456075 KCNQ4P56696 695 aa13.77□□□□□ -0.21
TOP3B-212ENST00000456075 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
TOP3B-212ENST00000456075 PNNQ9H307 717 aaKnown RBP13.77□□□□□ -0.21
TOP3B-212ENST00000456075 ITGB4P16144 1822 aa13.76□□□□□ -0.21
TOP3B-212ENST00000456075 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
TOP3B-212ENST00000456075 NFATC2IPQ8NCF5 419 aa13.76□□□□□ -0.21
TOP3B-212ENST00000456075 TFCP2L1Q9NZI6 479 aa13.76□□□□□ -0.21
TOP3B-212ENST00000456075 ASAP1Q9ULH1 1129 aa13.76□□□□□ -0.21
TOP3B-212ENST00000456075 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
TOP3B-212ENST00000456075 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
TOP3B-212ENST00000456075 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
TOP3B-212ENST00000456075 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
TOP3B-212ENST00000456075 LY75O60449 1722 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 RNMTO43148 476 aaKnown RBP13.74□□□□□ -0.21
TOP3B-212ENST00000456075 SIK1P57059 783 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 TEFQ10587 303 aa13.74□□□□□ -0.21
TOP3B-212ENST00000456075 WDR43Q15061 677 aaKnown RBP eCLIP13.74□□□□□ -0.21
TOP3B-212ENST00000456075 ZNF827Q17R98 1081 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms