RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 BCRP11274 1271 aa8.42□□□□□ -1.06
R3HDM1-212ENST00000456040 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
R3HDM1-212ENST00000456040 TRERF1Q96PN7 1200 aa8.42□□□□□ -1.06
R3HDM1-212ENST00000456040 H7C1W4 665 aa8.41□□□□□ -1.06
R3HDM1-212ENST00000456040 PTGIRP43119 386 aa8.41□□□□□ -1.06
R3HDM1-212ENST00000456040 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
R3HDM1-212ENST00000456040 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
R3HDM1-212ENST00000456040 RIPOR1Q6ZS17 1223 aa8.4□□□□□ -1.06
R3HDM1-212ENST00000456040 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.4□□□□□ -1.06
R3HDM1-212ENST00000456040 GPSM3Q9Y4H4 160 aa8.4□□□□□ -1.06
R3HDM1-212ENST00000456040 IGF1RP08069 1367 aa8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 RAB15P59190 212 aa8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 GAS6Q14393 721 aa8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 PRICKLE2Q7Z3G6 844 aa8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 TRIM22Q8IYM9 498 aa8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 PCMTD1Q96MG8 357 aaPredicted RBP8.39□□□□□ -1.07
R3HDM1-212ENST00000456040 CTDSPL2Q05D32 466 aa8.38□□□□□ -1.07
R3HDM1-212ENST00000456040 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
R3HDM1-212ENST00000456040 LRRC4BQ9NT99 713 aa8.38□□□□□ -1.07
R3HDM1-212ENST00000456040 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
R3HDM1-212ENST00000456040 ZNF784Q8NCA9 323 aaPredicted RBP8.37□□□□□ -1.07
R3HDM1-212ENST00000456040 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
R3HDM1-212ENST00000456040 FOXD4L5Q5VV16 416 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-212ENST00000456040 ADAM32Q8TC27 787 aa8.36□□□□□ -1.07
R3HDM1-212ENST00000456040 CUEDC1Q9NWM3 386 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-212ENST00000456040 RHOQP17081 205 aa8.35□□□□□ -1.07
R3HDM1-212ENST00000456040 MX2P20592 715 aa8.35□□□□□ -1.07
R3HDM1-212ENST00000456040 RNF144AP50876 292 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-212ENST00000456040 ALYREFQ86V81 257 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-212ENST00000456040 ZNF837Q96EG3 531 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-212ENST00000456040 GPR25O00155 361 aa8.34□□□□□ -1.07
R3HDM1-212ENST00000456040 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
R3HDM1-212ENST00000456040 PROCP04070 461 aa8.33□□□□□ -1.08
R3HDM1-212ENST00000456040 GAS2L1Q99501 681 aaPredicted RBP8.33□□□□□ -1.08
R3HDM1-212ENST00000456040 GPC1P35052 558 aa8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 NR6A1Q15406 480 aa8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 FBXO31Q5XUX0 539 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 GTPBP3Q969Y2 492 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 ACDQ96AP0 544 aa8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 MKL2Q9ULH7 1088 aa8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 DYRK1BQ9Y463 629 aa8.32□□□□□ -1.08
R3HDM1-212ENST00000456040 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 MEN1O00255 615 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 LILRA1O75019 489 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 AP1G2O75843 785 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 RFC5P40937 340 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 MAP2K3P46734 347 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 DBN1Q16643 649 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 SLC27A3Q5K4L6 730 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 NLRP3Q96P20 1036 aa8.31□□□□□ -1.08
R3HDM1-212ENST00000456040 PIK3R2O00459 728 aa8.3□□□□□ -1.08
R3HDM1-212ENST00000456040 BAG6P46379 1132 aa8.3□□□□□ -1.08
R3HDM1-212ENST00000456040 CYLDQ9NQC7 956 aa8.3□□□□□ -1.08
R3HDM1-212ENST00000456040 OIP5O43482 229 aa8.29□□□□□ -1.08
R3HDM1-212ENST00000456040 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
R3HDM1-212ENST00000456040 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-212ENST00000456040 RRAGCQ9HB90 399 aa8.29□□□□□ -1.08
R3HDM1-212ENST00000456040 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
R3HDM1-212ENST00000456040 Q8N3U1 123 aa8.28□□□□□ -1.08
R3HDM1-212ENST00000456040 OXCT2Q9BYC2 517 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-212ENST00000456040 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
R3HDM1-212ENST00000456040 ITGB2P05107 769 aa8.27□□□□□ -1.09
R3HDM1-212ENST00000456040 KDF1Q8NAX2 398 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-212ENST00000456040 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
R3HDM1-212ENST00000456040 POU4F2Q12837 409 aa8.26□□□□□ -1.09
R3HDM1-212ENST00000456040 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
R3HDM1-212ENST00000456040 ESPNB1AK53 854 aa8.25□□□□□ -1.09
R3HDM1-212ENST00000456040 FURINP09958 794 aa8.25□□□□□ -1.09
R3HDM1-212ENST00000456040 OCSTAMPQ9BR26 566 aa8.25□□□□□ -1.09
R3HDM1-212ENST00000456040 TIMMDC1Q9NPL8 285 aa8.25□□□□□ -1.09
R3HDM1-212ENST00000456040 A0A1W2PRU2 124 aa8.24□□□□□ -1.09
R3HDM1-212ENST00000456040 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
R3HDM1-212ENST00000456040 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
R3HDM1-212ENST00000456040 GDF2Q9UK05 429 aaPredicted RBP8.24□□□□□ -1.09
R3HDM1-212ENST00000456040 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
R3HDM1-212ENST00000456040 F11P03951 625 aa8.23□□□□□ -1.09
R3HDM1-212ENST00000456040 AMPD1P23109 780 aa8.23□□□□□ -1.09
R3HDM1-212ENST00000456040 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
R3HDM1-212ENST00000456040 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
R3HDM1-212ENST00000456040 NBPF15Q8N660 670 aa8.22□□□□□ -1.09
R3HDM1-212ENST00000456040 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
R3HDM1-212ENST00000456040 SNRPNP63162 240 aaKnown RBP8.21□□□□□ -1.1
R3HDM1-212ENST00000456040 GRIN2CQ14957 1233 aa8.21□□□□□ -1.1
R3HDM1-212ENST00000456040 TAS1R3Q7RTX0 852 aa8.21□□□□□ -1.1
R3HDM1-212ENST00000456040 CYP2U1Q7Z449 544 aa8.21□□□□□ -1.1
R3HDM1-212ENST00000456040 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
R3HDM1-212ENST00000456040 GTF2E1P29083 439 aaPredicted RBP8.2□□□□□ -1.1
R3HDM1-212ENST00000456040 CC2D2BQ6DHV5 1058 aa8.2□□□□□ -1.1
R3HDM1-212ENST00000456040 GOLGA6L1Q8N7Z2 621 aa8.2□□□□□ -1.1
R3HDM1-212ENST00000456040 EDARADDQ8WWZ3 215 aa8.2□□□□□ -1.1
R3HDM1-212ENST00000456040 HMX1Q9NP08 348 aaPredicted RBP8.2□□□□□ -1.1
R3HDM1-212ENST00000456040 WASLO00401 505 aaPredicted RBP8.19□□□□□ -1.1
R3HDM1-212ENST00000456040 ZNF592Q92610 1267 aa8.19□□□□□ -1.1
R3HDM1-212ENST00000456040 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
R3HDM1-212ENST00000456040 SPATA31C2B4DYI2 1134 aa8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms