RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.37
CHCHD4P3-201ENST00000455954 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
CHCHD4P3-201ENST00000455954 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
CHCHD4P3-201ENST00000455954 ARHGEF25Q86VW2 580 aa12.76□□□□□ -0.37
CHCHD4P3-201ENST00000455954 NME9Q86XW9 330 aa12.76□□□□□ -0.37
CHCHD4P3-201ENST00000455954 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
CHCHD4P3-201ENST00000455954 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
CHCHD4P3-201ENST00000455954 SOX12O15370 315 aa12.75□□□□□ -0.37
CHCHD4P3-201ENST00000455954 ZRANB1Q9UGI0 708 aa12.75□□□□□ -0.37
CHCHD4P3-201ENST00000455954 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
CHCHD4P3-201ENST00000455954 COL5A2P05997 1499 aaPredicted RBP12.74□□□□□ -0.37
CHCHD4P3-201ENST00000455954 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
CHCHD4P3-201ENST00000455954 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
CHCHD4P3-201ENST00000455954 ANKRD36BQ8N2N9 1353 aa12.73□□□□□ -0.37
CHCHD4P3-201ENST00000455954 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
CHCHD4P3-201ENST00000455954 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
CHCHD4P3-201ENST00000455954 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
CHCHD4P3-201ENST00000455954 THRAP3Q9Y2W1 955 aaKnown RBP12.73□□□□□ -0.37
CHCHD4P3-201ENST00000455954 RGS3P49796 1198 aa12.72□□□□□ -0.37
CHCHD4P3-201ENST00000455954 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
CHCHD4P3-201ENST00000455954 AXIN2Q9Y2T1 843 aa12.72□□□□□ -0.37
CHCHD4P3-201ENST00000455954 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
CHCHD4P3-201ENST00000455954 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
CHCHD4P3-201ENST00000455954 NFAT5O94916 1531 aa12.72□□□□□ -0.37
CHCHD4P3-201ENST00000455954 CRB1P82279 1406 aa12.71□□□□□ -0.37
CHCHD4P3-201ENST00000455954 COL18A1P39060 1754 aa12.71□□□□□ -0.37
CHCHD4P3-201ENST00000455954 TOM1L2Q6ZVM7 507 aa12.71□□□□□ -0.37
CHCHD4P3-201ENST00000455954 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
CHCHD4P3-201ENST00000455954 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
CHCHD4P3-201ENST00000455954 COG3Q96JB2 828 aa12.7□□□□□ -0.38
CHCHD4P3-201ENST00000455954 TBC1D32Q96NH3 1257 aa12.7□□□□□ -0.38
CHCHD4P3-201ENST00000455954 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
CHCHD4P3-201ENST00000455954 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
CHCHD4P3-201ENST00000455954 ABCC6O95255 1503 aa12.69□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CSB-PGBD3P0DP91 1061 aa12.69□□□□□ -0.38
CHCHD4P3-201ENST00000455954 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CCDC27Q2M243 656 aa12.69□□□□□ -0.38
CHCHD4P3-201ENST00000455954 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
CHCHD4P3-201ENST00000455954 ANTXR1Q9H6X2 564 aa12.69□□□□□ -0.38
CHCHD4P3-201ENST00000455954 APAF1O14727 1248 aa12.68□□□□□ -0.38
CHCHD4P3-201ENST00000455954 IGHDP01880 384 aa12.68□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
CHCHD4P3-201ENST00000455954 FYB1O15117 783 aa12.67□□□□□ -0.38
CHCHD4P3-201ENST00000455954 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
CHCHD4P3-201ENST00000455954 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
CHCHD4P3-201ENST00000455954 BCAR3O75815 825 aa12.66□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
CHCHD4P3-201ENST00000455954 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
CHCHD4P3-201ENST00000455954 NSD2O96028 1365 aa12.66□□□□□ -0.38
CHCHD4P3-201ENST00000455954 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CANXP27824 592 aaKnown RBP12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 IP6K1Q92551 441 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 CARD14Q9BXL6 1004 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 RGPD5Q99666 1765 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
CHCHD4P3-201ENST00000455954 ERBB3P21860 1342 aa12.64□□□□□ -0.39
CHCHD4P3-201ENST00000455954 LTN1O94822 1766 aa12.64□□□□□ -0.39
CHCHD4P3-201ENST00000455954 DDB1Q16531 1140 aa12.64□□□□□ -0.39
CHCHD4P3-201ENST00000455954 DEFB132Q7Z7B7 95 aa12.64□□□□□ -0.39
CHCHD4P3-201ENST00000455954 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
CHCHD4P3-201ENST00000455954 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 PTMSP20962 102 aa12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 BAG6P46379 1132 aa12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 NLRP2Q9NX02 1062 aa12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 CHMP5Q9NZZ3 219 aa12.63□□□□□ -0.39
CHCHD4P3-201ENST00000455954 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
CHCHD4P3-201ENST00000455954 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
CHCHD4P3-201ENST00000455954 FBLN1P23142 703 aa12.62□□□□□ -0.39
CHCHD4P3-201ENST00000455954 AMPHP49418 695 aa12.62□□□□□ -0.39
CHCHD4P3-201ENST00000455954 GOLGA6L3A6NEY3 463 aa12.61□□□□□ -0.39
CHCHD4P3-201ENST00000455954 TRIM37O94972 964 aa12.61□□□□□ -0.39
CHCHD4P3-201ENST00000455954 HOXC9P31274 260 aa12.61□□□□□ -0.39
CHCHD4P3-201ENST00000455954 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
CHCHD4P3-201ENST00000455954 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
CHCHD4P3-201ENST00000455954 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 EXOC5O00471 708 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 MCM4P33991 863 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 CLCN1P35523 988 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 DISP2A7MBM2 1401 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
CHCHD4P3-201ENST00000455954 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 SEC24BO95487 1268 aa12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 IL2RBP14784 551 aa12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
CHCHD4P3-201ENST00000455954 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms