RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 KCNQ2O43526 872 aa16.29■□□□□ 0.2
TMEM56-202ENST00000455656 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
TMEM56-202ENST00000455656 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
TMEM56-202ENST00000455656 LRP5O75197 1615 aa16.27■□□□□ 0.2
TMEM56-202ENST00000455656 PROM2Q8N271 834 aa16.27■□□□□ 0.2
TMEM56-202ENST00000455656 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
TMEM56-202ENST00000455656 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
TMEM56-202ENST00000455656 ACSBG1Q96GR2 724 aa16.26■□□□□ 0.19
TMEM56-202ENST00000455656 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
TMEM56-202ENST00000455656 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
TMEM56-202ENST00000455656 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
TMEM56-202ENST00000455656 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
TMEM56-202ENST00000455656 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
TMEM56-202ENST00000455656 EYA1Q99502 592 aa16.25■□□□□ 0.19
TMEM56-202ENST00000455656 LY75O60449 1722 aa16.25■□□□□ 0.19
TMEM56-202ENST00000455656 ITGB4P16144 1822 aa16.24■□□□□ 0.19
TMEM56-202ENST00000455656 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
TMEM56-202ENST00000455656 DDX54Q8TDD1 881 aaKnown RBP16.24■□□□□ 0.19
TMEM56-202ENST00000455656 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
TMEM56-202ENST00000455656 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
TMEM56-202ENST00000455656 CASZ1Q86V15 1759 aa16.23■□□□□ 0.19
TMEM56-202ENST00000455656 IGSF1Q8N6C5 1336 aa16.22■□□□□ 0.19
TMEM56-202ENST00000455656 R3HDM1Q15032 1099 aaKnown RBP16.22■□□□□ 0.19
TMEM56-202ENST00000455656 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
TMEM56-202ENST00000455656 ANO8Q9HCE9 1232 aaPredicted RBP16.21■□□□□ 0.19
TMEM56-202ENST00000455656 SRCAPQ6ZRS2 3230 aa16.2■□□□□ 0.18
TMEM56-202ENST00000455656 CYP27B1O15528 508 aa16.2■□□□□ 0.18
TMEM56-202ENST00000455656 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
TMEM56-202ENST00000455656 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
TMEM56-202ENST00000455656 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
TMEM56-202ENST00000455656 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
TMEM56-202ENST00000455656 TUBGCP6Q96RT7 1819 aa16.18■□□□□ 0.18
TMEM56-202ENST00000455656 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
TMEM56-202ENST00000455656 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
TMEM56-202ENST00000455656 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
TMEM56-202ENST00000455656 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
TMEM56-202ENST00000455656 IL13P35225 146 aa16.16■□□□□ 0.18
TMEM56-202ENST00000455656 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
TMEM56-202ENST00000455656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.18
TMEM56-202ENST00000455656 KDRP35968 1356 aa16.15■□□□□ 0.18
TMEM56-202ENST00000455656 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
TMEM56-202ENST00000455656 MTHFSP49914 203 aa16.15■□□□□ 0.18
TMEM56-202ENST00000455656 NKX1-1Q15270 411 aaPredicted RBP16.15■□□□□ 0.18
TMEM56-202ENST00000455656 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
TMEM56-202ENST00000455656 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
TMEM56-202ENST00000455656 VIRMAQ69YN4 1812 aaKnown RBP16.13■□□□□ 0.17
TMEM56-202ENST00000455656 PHKG2P15735 406 aa16.12■□□□□ 0.17
TMEM56-202ENST00000455656 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
TMEM56-202ENST00000455656 PDGFDQ9GZP0 370 aaPredicted RBP16.12■□□□□ 0.17
TMEM56-202ENST00000455656 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
TMEM56-202ENST00000455656 C5P01031 1676 aa16.11■□□□□ 0.17
TMEM56-202ENST00000455656 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
TMEM56-202ENST00000455656 SCN11AQ9UI33 1791 aa16.1■□□□□ 0.17
TMEM56-202ENST00000455656 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
TMEM56-202ENST00000455656 KCNQ4P56696 695 aa16.09■□□□□ 0.17
TMEM56-202ENST00000455656 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
TMEM56-202ENST00000455656 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
TMEM56-202ENST00000455656 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
TMEM56-202ENST00000455656 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
TMEM56-202ENST00000455656 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.17
TMEM56-202ENST00000455656 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.16
TMEM56-202ENST00000455656 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
TMEM56-202ENST00000455656 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
TMEM56-202ENST00000455656 PIGBQ92521 554 aa16.07■□□□□ 0.16
TMEM56-202ENST00000455656 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
TMEM56-202ENST00000455656 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
TMEM56-202ENST00000455656 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
TMEM56-202ENST00000455656 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
TMEM56-202ENST00000455656 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
TMEM56-202ENST00000455656 PLEKHO1Q53GL0 409 aaPredicted RBP16.05■□□□□ 0.16
TMEM56-202ENST00000455656 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
TMEM56-202ENST00000455656 UBR3Q6ZT12 1888 aa16.04■□□□□ 0.16
TMEM56-202ENST00000455656 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
TMEM56-202ENST00000455656 HMOX1P09601 288 aa16.03■□□□□ 0.16
TMEM56-202ENST00000455656 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
TMEM56-202ENST00000455656 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
TMEM56-202ENST00000455656 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
TMEM56-202ENST00000455656 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
TMEM56-202ENST00000455656 PTGER2P43116 358 aa16.02■□□□□ 0.16
TMEM56-202ENST00000455656 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.15
TMEM56-202ENST00000455656 DCAF5Q96JK2 942 aa16.01■□□□□ 0.15
TMEM56-202ENST00000455656 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
TMEM56-202ENST00000455656 SPON1Q9HCB6 807 aa16.01■□□□□ 0.15
TMEM56-202ENST00000455656 TMOD3Q9NYL9 352 aa16.01■□□□□ 0.15
TMEM56-202ENST00000455656 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
TMEM56-202ENST00000455656 MRC1P22897 1456 aa16.01■□□□□ 0.15
TMEM56-202ENST00000455656 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
TMEM56-202ENST00000455656 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
TMEM56-202ENST00000455656 ZBTB7AO95365 584 aa16■□□□□ 0.15
TMEM56-202ENST00000455656 SMARCC1Q92922 1105 aaPredicted RBP16■□□□□ 0.15
TMEM56-202ENST00000455656 ATG3Q9NT62 314 aa16■□□□□ 0.15
TMEM56-202ENST00000455656 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
TMEM56-202ENST00000455656 HSP90AB1P08238 724 aaKnown RBP15.99■□□□□ 0.15
TMEM56-202ENST00000455656 TJP1Q07157 1748 aa15.99■□□□□ 0.15
TMEM56-202ENST00000455656 MTHFSDQ2M296 383 aaKnown RBP15.98■□□□□ 0.15
TMEM56-202ENST00000455656 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
TMEM56-202ENST00000455656 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
TMEM56-202ENST00000455656 SIK1P57059 783 aa15.97■□□□□ 0.15
TMEM56-202ENST00000455656 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
TMEM56-202ENST00000455656 C1orf141Q5JVX7 400 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms