RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 NFKBIBQ15653 356 aa11.9□□□□□ -0.5
SCN5A-210ENST00000455624 TSR2Q969E8 191 aaKnown RBP11.9□□□□□ -0.5
SCN5A-210ENST00000455624 CFAP70Q5T0N1 1121 aa11.9□□□□□ -0.5
SCN5A-210ENST00000455624 GOLGA6L7A0A1B0GV03 622 aa11.9□□□□□ -0.5
SCN5A-210ENST00000455624 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCN5A-210ENST00000455624 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 POLR3DP05423 398 aaPredicted RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC112Q8NEF3 446 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 TAF4BQ92750 862 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 POGZQ7Z3K3 1410 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 ZPR1O75312 459 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 MTERF4Q7Z6M4 381 aaKnown RBP11.89□□□□□ -0.51
SCN5A-210ENST00000455624 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
SCN5A-210ENST00000455624 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 ZNF397Q8NF99 534 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 CABP1Q9NZU7 370 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 ERLIN1O75477 346 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 STARD3NLO95772 234 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 KRT85P78386 507 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 ZSCAN31Q96LW9 406 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 TSG101Q99816 390 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 ZNF287Q9HBT7 754 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC66A2RUB6 948 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 BCAR3O75815 825 aa11.88□□□□□ -0.51
SCN5A-210ENST00000455624 CWC27Q6UX04 472 aaKnown RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
SCN5A-210ENST00000455624 SMTNL1A8MU46 457 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 HECW1Q76N89 1606 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
SCN5A-210ENST00000455624 PPP1R12BO60237 982 aaPredicted RBP11.87□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC91Q7Z6B0 441 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 EHMT1Q9H9B1 1298 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
SCN5A-210ENST00000455624 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 CUL5Q93034 780 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 EHBP1L1Q8N3D4 1523 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 EIF3JO75822 258 aaKnown RBP11.87□□□□□ -0.51
SCN5A-210ENST00000455624 IDH1O75874 414 aaKnown RBP11.87□□□□□ -0.51
SCN5A-210ENST00000455624 METTL24Q5JXM2 366 aa11.87□□□□□ -0.51
SCN5A-210ENST00000455624 HSP90AB3PQ58FF7 597 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 CEP126Q9P2H0 1117 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC148Q8NFR7 591 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 ANAPC15P60006 121 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 KRT32Q14532 448 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 DHX37Q8IY37 1157 aaKnown RBP11.86□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
SCN5A-210ENST00000455624 TMOD3Q9NYL9 352 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 CFAP45Q9UL16 551 aa11.86□□□□□ -0.51
SCN5A-210ENST00000455624 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
SCN5A-210ENST00000455624 TMEM87AQ8NBN3 555 aa11.85□□□□□ -0.51
SCN5A-210ENST00000455624 AKAP2Q9Y2D5 859 aa11.85□□□□□ -0.51
SCN5A-210ENST00000455624 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
SCN5A-210ENST00000455624 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
SCN5A-210ENST00000455624 ERICH3Q5RHP9 1530 aa11.85□□□□□ -0.51
SCN5A-210ENST00000455624 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
SCN5A-210ENST00000455624 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
SCN5A-210ENST00000455624 CHD1LQ86WJ1 897 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 CETN2P41208 172 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
SCN5A-210ENST00000455624 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
SCN5A-210ENST00000455624 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 MKNK2Q9HBH9 465 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 DZIP1Q86YF9 867 aaKnown RBP11.84□□□□□ -0.51
SCN5A-210ENST00000455624 WDR63Q8IWG1 891 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
SCN5A-210ENST00000455624 C9orf84Q5VXU9 1444 aa11.84□□□□□ -0.51
SCN5A-210ENST00000455624 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.51
SCN5A-210ENST00000455624 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 NUP62CLQ9H1M0 184 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 AFAP1Q8N556 730 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 ANKRD30BQ9BXX2 1392 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 ABCF2Q9UG63 623 aa11.83□□□□□ -0.52
SCN5A-210ENST00000455624 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.52
SCN5A-210ENST00000455624 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
SCN5A-210ENST00000455624 MYD88Q99836 296 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms