RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ARID3CA6NKF2 412 aa6.37□□□□□ -1.39
RBM39-220ENST00000455343 TERTO14746 1132 aaKnown RBP6.37□□□□□ -1.39
RBM39-220ENST00000455343 WDR4P57081 412 aaKnown RBP6.37□□□□□ -1.39
RBM39-220ENST00000455343 ARID5BQ14865 1188 aa6.37□□□□□ -1.39
RBM39-220ENST00000455343 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
RBM39-220ENST00000455343 SH3RF1Q7Z6J0 888 aa6.37□□□□□ -1.39
RBM39-220ENST00000455343 KLF16Q9BXK1 252 aaPredicted RBP6.37□□□□□ -1.39
RBM39-220ENST00000455343 FRMPD1Q5SYB0 1578 aa6.36□□□□□ -1.39
RBM39-220ENST00000455343 SKIV2LQ15477 1246 aaKnown RBP6.36□□□□□ -1.39
RBM39-220ENST00000455343 MRPL14Q6P1L8 145 aaKnown RBP6.36□□□□□ -1.39
RBM39-220ENST00000455343 SH3BP5LQ7L8J4 393 aa6.36□□□□□ -1.39
RBM39-220ENST00000455343 DDRGK1Q96HY6 314 aa6.36□□□□□ -1.39
RBM39-220ENST00000455343 ZFP42Q96MM3 310 aa6.36□□□□□ -1.39
RBM39-220ENST00000455343 DENND4BO75064 1496 aaPredicted RBP6.35□□□□□ -1.39
RBM39-220ENST00000455343 WIPF1O43516 503 aa6.35□□□□□ -1.39
RBM39-220ENST00000455343 NR3C2P08235 984 aa6.35□□□□□ -1.39
RBM39-220ENST00000455343 CTDSPL2Q05D32 466 aa6.35□□□□□ -1.39
RBM39-220ENST00000455343 NR5A1Q13285 461 aa6.35□□□□□ -1.39
RBM39-220ENST00000455343 FBXO31Q5XUX0 539 aaPredicted RBP6.35□□□□□ -1.39
RBM39-220ENST00000455343 FAM9AQ8IZU1 332 aaPredicted RBP6.35□□□□□ -1.39
RBM39-220ENST00000455343 GPKOWQ92917 476 aaPredicted RBP eCLIP6.35□□□□□ -1.391e-6■□□□□ 9.9
RBM39-220ENST00000455343 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.35□□□□□ -1.39
RBM39-220ENST00000455343 FAM117AQ9C073 453 aa6.35□□□□□ -1.39
RBM39-220ENST00000455343 POGZQ7Z3K3 1410 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 AKNAQ7Z591 1439 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 YEATS2Q9ULM3 1422 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 GRM5P41594 1212 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 TRMT44Q8IYL2 757 aaKnown RBP6.34□□□□□ -1.39
RBM39-220ENST00000455343 ITPKCQ96DU7 683 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 MAP4K5Q9Y4K4 846 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 ARHGEF40Q8TER5 1519 aa6.34□□□□□ -1.39
RBM39-220ENST00000455343 MAGI2Q86UL8 1455 aa6.34□□□□□ -1.4
RBM39-220ENST00000455343 MAGEB6P1A0A0J9YX57 407 aa6.33□□□□□ -1.4
RBM39-220ENST00000455343 ZIC2O95409 532 aaPredicted RBP6.33□□□□□ -1.4
RBM39-220ENST00000455343 FSHRP23945 695 aa6.33□□□□□ -1.4
RBM39-220ENST00000455343 SCARF1Q14162 830 aa6.33□□□□□ -1.4
RBM39-220ENST00000455343 PPP2R2DQ66LE6 453 aa6.33□□□□□ -1.4
RBM39-220ENST00000455343 PROCA1Q8NCQ7 364 aaPredicted RBP6.33□□□□□ -1.4
RBM39-220ENST00000455343 LRRN4Q8WUT4 740 aa6.33□□□□□ -1.4
RBM39-220ENST00000455343 PURBQ96QR8 312 aaKnown RBP6.33□□□□□ -1.4
RBM39-220ENST00000455343 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
RBM39-220ENST00000455343 NXF1Q9UBU9 619 aaKnown RBP6.33□□□□□ -1.4
RBM39-220ENST00000455343 ZMYM4Q5VZL5 1548 aa6.32□□□□□ -1.4
RBM39-220ENST00000455343 PLEKHD1A6NEE1 506 aa6.32□□□□□ -1.4
RBM39-220ENST00000455343 SLC24A1O60721 1099 aa6.32□□□□□ -1.4
RBM39-220ENST00000455343 VASH1Q7L8A9 365 aaPredicted RBP6.32□□□□□ -1.4
RBM39-220ENST00000455343 CARD14Q9BXL6 1004 aa6.32□□□□□ -1.4
RBM39-220ENST00000455343 FANCAO15360 1455 aa6.32□□□□□ -1.4
RBM39-220ENST00000455343 NUP153P49790 1475 aaKnown RBP6.32□□□□□ -1.4
RBM39-220ENST00000455343 CEBPAP49715 358 aaPredicted RBP6.31□□□□□ -1.4
RBM39-220ENST00000455343 MLECQ14165 292 aa6.31□□□□□ -1.4
RBM39-220ENST00000455343 ERFEQ4G0M1 354 aa6.31□□□□□ -1.4
RBM39-220ENST00000455343 NPAS3Q8IXF0 933 aa6.31□□□□□ -1.4
RBM39-220ENST00000455343 FKBPLQ9UIM3 349 aa6.31□□□□□ -1.4
RBM39-220ENST00000455343 ZC3H4Q9UPT8 1303 aaKnown RBP6.3□□□□□ -1.4
RBM39-220ENST00000455343 RIMS1Q86UR5 1692 aaKnown RBP6.3□□□□□ -1.4
RBM39-220ENST00000455343 PDXDC2PQ6P474 469 aa6.3□□□□□ -1.4
RBM39-220ENST00000455343 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
RBM39-220ENST00000455343 SLC16A10Q8TF71 515 aa6.3□□□□□ -1.4
RBM39-220ENST00000455343 PTPRTO14522 1441 aa6.3□□□□□ -1.4
RBM39-220ENST00000455343 TTC37Q6PGP7 1564 aa6.3□□□□□ -1.4
RBM39-220ENST00000455343 ARHGEF12Q9NZN5 1544 aa6.3□□□□□ -1.4
RBM39-220ENST00000455343 H3BM21 787 aa6.29□□□□□ -1.4
RBM39-220ENST00000455343 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
RBM39-220ENST00000455343 NR6A1Q15406 480 aa6.29□□□□□ -1.4
RBM39-220ENST00000455343 CCDC116Q8IYX3 515 aa6.29□□□□□ -1.4
RBM39-220ENST00000455343 ARHGAP9Q9BRR9 750 aa6.29□□□□□ -1.4
RBM39-220ENST00000455343 EFCAB5A4FU69 1503 aa6.29□□□□□ -1.4
RBM39-220ENST00000455343 ZFYVE16Q7Z3T8 1539 aa6.29□□□□□ -1.4
RBM39-220ENST00000455343 ATP10AO60312 1499 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 RICTORQ6R327 1708 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 SIGLEC1Q9BZZ2 1709 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 PLCH2O75038 1416 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 SCAPERQ9BY12 1400 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 SOBPA7XYQ1 873 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 AP1G2O75843 785 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 VEGFBP49765 207 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 C6orf118Q5T5N4 469 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 LINC00528Q8N1L1 170 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 ATP1B4Q9UN42 357 aaPredicted RBP6.28□□□□□ -1.4
RBM39-220ENST00000455343 EMILIN1Q9Y6C2 1016 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 CTTNBP2Q8WZ74 1663 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.28□□□□□ -1.4
RBM39-220ENST00000455343 LTBP4Q8N2S1 1624 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 IQSEC2Q5JU85 1478 aa6.28□□□□□ -1.4
RBM39-220ENST00000455343 SAMD9Q5K651 1589 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 C9orf84Q5VXU9 1444 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 UHRF1BP1Q6BDS2 1440 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 USP17L8P0C7I0 530 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 IRF7Q92985 503 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 SLC10A4Q96EP9 437 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 OCSTAMPQ9BR26 566 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 HMX1Q9NP08 348 aaPredicted RBP6.27□□□□□ -1.41
RBM39-220ENST00000455343 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 HECW1Q76N89 1606 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 RAPGEF6Q8TEU7 1601 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 SPATA31D1Q6ZQQ2 1576 aa6.27□□□□□ -1.41
RBM39-220ENST00000455343 ERBB4Q15303 1308 aa6.26□□□□□ -1.41
RBM39-220ENST00000455343 UPP2O95045 317 aa6.26□□□□□ -1.41
RBM39-220ENST00000455343 BMP2P12643 396 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 485.9 ms