RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 PLEKHG2Q9H7P9 1386 aa27.93■■■□□ 2.06
TNRC18-208ENST00000455076 PPM1GO15355 546 aaPredicted RBP27.92■■■□□ 2.06
TNRC18-208ENST00000455076 ZCRB1Q8TBF4 217 aaKnown RBP27.92■■■□□ 2.06
TNRC18-208ENST00000455076 RAPGEF4Q8WZA2 1011 aa27.92■■■□□ 2.06
TNRC18-208ENST00000455076 NPC1L1Q9UHC9 1359 aa27.91■■■□□ 2.06
TNRC18-208ENST00000455076 BTAF1O14981 1849 aa27.91■■■□□ 2.06
TNRC18-208ENST00000455076 MORC1Q86VD1 984 aa27.91■■■□□ 2.06
TNRC18-208ENST00000455076 LRP5O75197 1615 aa27.89■■■□□ 2.06
TNRC18-208ENST00000455076 KCNQ2O43526 872 aa27.89■■■□□ 2.06
TNRC18-208ENST00000455076 TATP17735 454 aaPredicted RBP27.89■■■□□ 2.06
TNRC18-208ENST00000455076 TNNT2P45379 298 aaPredicted RBP27.89■■■□□ 2.06
TNRC18-208ENST00000455076 DOT1LQ8TEK3 1739 aa27.89■■■□□ 2.05
TNRC18-208ENST00000455076 EIF4A2Q14240 407 aaKnown RBP27.87■■■□□ 2.05
TNRC18-208ENST00000455076 DDX54Q8TDD1 881 aaKnown RBP27.87■■■□□ 2.05
TNRC18-208ENST00000455076 EYA1Q99502 592 aa27.87■■■□□ 2.05
TNRC18-208ENST00000455076 PCDH11XQ9BZA7 1347 aa27.86■■■□□ 2.05
TNRC18-208ENST00000455076 PCDH11YQ9BZA8 1340 aa27.86■■■□□ 2.05
TNRC18-208ENST00000455076 PROM2Q8N271 834 aa27.85■■■□□ 2.05
TNRC18-208ENST00000455076 ACSBG1Q96GR2 724 aa27.85■■■□□ 2.05
TNRC18-208ENST00000455076 IGSF1Q8N6C5 1336 aa27.85■■■□□ 2.05
TNRC18-208ENST00000455076 PSDA5PKW4 1024 aaPredicted RBP27.84■■■□□ 2.05
TNRC18-208ENST00000455076 R3HDM1Q15032 1099 aaKnown RBP27.83■■■□□ 2.05
TNRC18-208ENST00000455076 NBPF14Q5TI25 921 aa27.83■■■□□ 2.05
TNRC18-208ENST00000455076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.82■■■□□ 2.04
TNRC18-208ENST00000455076 KAT6BQ8WYB5 2073 aa27.82■■■□□ 2.04
TNRC18-208ENST00000455076 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
TNRC18-208ENST00000455076 TXNRD1Q16881 649 aa27.8■■■□□ 2.04
TNRC18-208ENST00000455076 CYP27B1O15528 508 aa27.78■■■□□ 2.04
TNRC18-208ENST00000455076 LY75O60449 1722 aa27.77■■■□□ 2.04
TNRC18-208ENST00000455076 TOGARAM1Q9Y4F4 1720 aa27.77■■■□□ 2.04
TNRC18-208ENST00000455076 ANO8Q9HCE9 1232 aaPredicted RBP27.76■■■□□ 2.03
TNRC18-208ENST00000455076 NKX1-1Q15270 411 aaPredicted RBP27.75■■■□□ 2.03
TNRC18-208ENST00000455076 SPG7Q9UQ90 795 aa27.75■■■□□ 2.03
TNRC18-208ENST00000455076 KDRP35968 1356 aa27.74■■■□□ 2.03
TNRC18-208ENST00000455076 PRIM1P49642 420 aaKnown RBP27.74■■■□□ 2.03
TNRC18-208ENST00000455076 CASZ1Q86V15 1759 aa27.73■■■□□ 2.03
TNRC18-208ENST00000455076 IL13P35225 146 aa27.72■■■□□ 2.03
TNRC18-208ENST00000455076 CC2D1BQ5T0F9 858 aaKnown RBP27.72■■■□□ 2.03
TNRC18-208ENST00000455076 ITGB4P16144 1822 aa27.71■■■□□ 2.03
TNRC18-208ENST00000455076 MTHFSP49914 203 aa27.7■■■□□ 2.02
TNRC18-208ENST00000455076 SLC27A3Q5K4L6 730 aa27.7■■■□□ 2.02
TNRC18-208ENST00000455076 SYTL4Q96C24 671 aaPredicted RBP27.69■■■□□ 2.02
TNRC18-208ENST00000455076 COL3A1P02461 1466 aaPredicted RBP27.69■■■□□ 2.02
TNRC18-208ENST00000455076 PHKG2P15735 406 aa27.67■■■□□ 2.02
TNRC18-208ENST00000455076 SLC15A2Q16348 729 aa27.66■■■□□ 2.02
TNRC18-208ENST00000455076 IFNL2Q8IZJ0 200 aa27.66■■■□□ 2.02
TNRC18-208ENST00000455076 LRRC4BQ9NT99 713 aa27.66■■■□□ 2.02
TNRC18-208ENST00000455076 QSER1Q2KHR3 1735 aa27.66■■■□□ 2.02
TNRC18-208ENST00000455076 STK32BQ9NY57 414 aa27.65■■■□□ 2.02
TNRC18-208ENST00000455076 AMOTQ4VCS5 1084 aa27.63■■■□□ 2.01
TNRC18-208ENST00000455076 AEBP1Q8IUX7 1158 aa27.63■■■□□ 2.01
TNRC18-208ENST00000455076 PLEKHO1Q53GL0 409 aaPredicted RBP27.61■■■□□ 2.01
TNRC18-208ENST00000455076 SULT6B1Q6IMI4 303 aa27.61■■■□□ 2.01
TNRC18-208ENST00000455076 AKT1S1Q96B36 256 aa27.59■■■□□ 2.01
TNRC18-208ENST00000455076 DIAPH1O60610 1272 aaKnown RBP27.58■■■□□ 2.01
TNRC18-208ENST00000455076 HSP90AB1P08238 724 aaKnown RBP27.58■■■□□ 2.01
TNRC18-208ENST00000455076 PALLDQ8WX93 1383 aa27.58■■■□□ 2.01
TNRC18-208ENST00000455076 ZNF827Q17R98 1081 aa27.57■■■□□ 2
TNRC18-208ENST00000455076 MPRIPQ6WCQ1 1025 aa27.57■■■□□ 2
TNRC18-208ENST00000455076 C5P01031 1676 aa27.56■■■□□ 2
TNRC18-208ENST00000455076 TAF1LQ8IZX4 1826 aa27.56■■■□□ 2
TNRC18-208ENST00000455076 PIGBQ92521 554 aa27.56■■■□□ 2
TNRC18-208ENST00000455076 SMARCC1Q92922 1105 aaPredicted RBP27.56■■■□□ 2
TNRC18-208ENST00000455076 KDM6AO15550 1401 aaPredicted RBP27.56■■■□□ 2
TNRC18-208ENST00000455076 TUBGCP6Q96RT7 1819 aa27.55■■■□□ 2
TNRC18-208ENST00000455076 DCAF5Q96JK2 942 aa27.55■■■□□ 2
TNRC18-208ENST00000455076 SPON1Q9HCB6 807 aa27.55■■■□□ 2
TNRC18-208ENST00000455076 CCNL1Q9UK58 526 aaPredicted RBP27.55■■■□□ 2
TNRC18-208ENST00000455076 HMGB2P26583 209 aaKnown RBP27.54■■■□□ 2
TNRC18-208ENST00000455076 ZNF530Q6P9A1 599 aaPredicted RBP27.54■■■□□ 2
TNRC18-208ENST00000455076 ERVV-2B6SEH9 535 aa27.53■■■□□ 2
TNRC18-208ENST00000455076 PDGFDQ9GZP0 370 aaPredicted RBP27.53■■■□□ 2
TNRC18-208ENST00000455076 TMOD3Q9NYL9 352 aa27.53■■■□□ 2
TNRC18-208ENST00000455076 ZNF831Q5JPB2 1677 aa27.51■■□□□ 1.99
TNRC18-208ENST00000455076 SCN11AQ9UI33 1791 aa27.5■■□□□ 1.99
TNRC18-208ENST00000455076 ADAMTS7Q9UKP4 1686 aa27.5■■□□□ 1.99
TNRC18-208ENST00000455076 PPP2R1AP30153 589 aa27.5■■□□□ 1.99
TNRC18-208ENST00000455076 COL24A1Q17RW2 1714 aa27.5■■□□□ 1.99
TNRC18-208ENST00000455076 KCNQ4P56696 695 aa27.49■■□□□ 1.99
TNRC18-208ENST00000455076 C1orf141Q5JVX7 400 aa27.48■■□□□ 1.99
TNRC18-208ENST00000455076 PNPLA7Q6ZV29 1317 aa27.47■■□□□ 1.99
TNRC18-208ENST00000455076 MRC1P22897 1456 aa27.47■■□□□ 1.99
TNRC18-208ENST00000455076 HMOX1P09601 288 aa27.47■■□□□ 1.99
TNRC18-208ENST00000455076 CNGB1Q14028 1251 aaPredicted RBP27.47■■□□□ 1.99
TNRC18-208ENST00000455076 MTFR1LQ9H019 292 aa27.47■■□□□ 1.99
TNRC18-208ENST00000455076 C4BP0C0L5 1744 aa27.47■■□□□ 1.99
TNRC18-208ENST00000455076 AKAP4Q5JQC9 854 aa27.46■■□□□ 1.99
TNRC18-208ENST00000455076 CFAP53Q96M91 514 aa27.46■■□□□ 1.99
TNRC18-208ENST00000455076 PTGER2P43116 358 aa27.45■■□□□ 1.98
TNRC18-208ENST00000455076 ZBTB7AO95365 584 aa27.44■■□□□ 1.98
TNRC18-208ENST00000455076 SLC16A10Q8TF71 515 aa27.44■■□□□ 1.98
TNRC18-208ENST00000455076 SGIP1Q9BQI5 828 aa27.44■■□□□ 1.98
TNRC18-208ENST00000455076 ATG3Q9NT62 314 aa27.44■■□□□ 1.98
TNRC18-208ENST00000455076 ASAP1Q9ULH1 1129 aa27.44■■□□□ 1.98
TNRC18-208ENST00000455076 LOC102724428A0A0B4J2F2 783 aa27.43■■□□□ 1.98
TNRC18-208ENST00000455076 SIK1P57059 783 aa27.43■■□□□ 1.98
TNRC18-208ENST00000455076 VIRMAQ69YN4 1812 aaKnown RBP27.43■■□□□ 1.98
TNRC18-208ENST00000455076 CICQ96RK0 1608 aaPredicted RBP27.42■■□□□ 1.98
TNRC18-208ENST00000455076 TFCP2L1Q9NZI6 479 aa27.42■■□□□ 1.98
TNRC18-208ENST00000455076 UBR3Q6ZT12 1888 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms