RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 CCDC102BQ68D86 513 aa8.88□□□□□ -0.99
CDH19-202ENST00000454642 TPCN2Q8NHX9 752 aa8.88□□□□□ -0.99
CDH19-202ENST00000454642 E9PSI1 815 aa8.87□□□□□ -0.99
CDH19-202ENST00000454642 PCDHB11Q9Y5F2 797 aa8.87□□□□□ -0.99
CDH19-202ENST00000454642 DKK1O94907 266 aa8.86□□□□□ -0.99
CDH19-202ENST00000454642 SEC13P55735 322 aa8.86□□□□□ -0.99
CDH19-202ENST00000454642 SIX5Q8N196 739 aa8.86□□□□□ -0.99
CDH19-202ENST00000454642 SOWAHDA6NJG2 315 aa8.85□□□□□ -0.99
CDH19-202ENST00000454642 NBPF20Q3BBV1 942 aa8.85□□□□□ -0.99
CDH19-202ENST00000454642 RNF20Q5VTR2 975 aa8.85□□□□□ -0.99
CDH19-202ENST00000454642 BIN2Q9UBW5 565 aaPredicted RBP8.85□□□□□ -0.99
CDH19-202ENST00000454642 HINFPQ9BQA5 517 aa8.85□□□□□ -0.99
CDH19-202ENST00000454642 AMOTL2Q9Y2J4 779 aa8.85□□□□□ -0.99
CDH19-202ENST00000454642 PPEF1O14829 653 aaPredicted RBP8.84□□□□□ -0.99
CDH19-202ENST00000454642 ABL1P00519 1130 aa8.84□□□□□ -0.99
CDH19-202ENST00000454642 SH3BP2P78314 561 aa8.84□□□□□ -0.99
CDH19-202ENST00000454642 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
CDH19-202ENST00000454642 MYO15BQ96JP2 1530 aa8.83□□□□□ -1
CDH19-202ENST00000454642 USP4Q13107 963 aa8.83□□□□□ -1
CDH19-202ENST00000454642 ANO2Q9NQ90 1003 aa8.83□□□□□ -1
CDH19-202ENST00000454642 OCLNQ16625 522 aa8.81□□□□□ -1
CDH19-202ENST00000454642 GAS2L2Q8NHY3 880 aa8.81□□□□□ -1
CDH19-202ENST00000454642 MKNK1Q9BUB5 465 aa8.81□□□□□ -1
CDH19-202ENST00000454642 CXXC1Q9P0U4 656 aaPredicted RBP8.81□□□□□ -1
CDH19-202ENST00000454642 ZNF211Q13398 564 aaPredicted RBP8.81□□□□□ -1
CDH19-202ENST00000454642 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
CDH19-202ENST00000454642 SIRT1Q96EB6 747 aa8.81□□□□□ -1
CDH19-202ENST00000454642 ESPNB1AK53 854 aa8.8□□□□□ -1
CDH19-202ENST00000454642 KCTD15Q96SI1 283 aaPredicted RBP8.8□□□□□ -1
CDH19-202ENST00000454642 C1QTNF2Q9BXJ5 285 aa8.8□□□□□ -1
CDH19-202ENST00000454642 SCTRP47872 440 aa8.79□□□□□ -1
CDH19-202ENST00000454642 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
CDH19-202ENST00000454642 DNAJC14Q6Y2X3 702 aaPredicted RBP8.79□□□□□ -1
CDH19-202ENST00000454642 UNCXA6NJT0 531 aa8.78□□□□□ -1
CDH19-202ENST00000454642 H3BRB1 525 aa8.78□□□□□ -1
CDH19-202ENST00000454642 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
CDH19-202ENST00000454642 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
CDH19-202ENST00000454642 C1orf216Q8TAB5 229 aa8.78□□□□□ -1
CDH19-202ENST00000454642 TUT1Q9H6E5 874 aaKnown RBP8.78□□□□□ -1
CDH19-202ENST00000454642 SHROOM4Q9ULL8 1493 aa8.78□□□□□ -1
CDH19-202ENST00000454642 MYCP01106 439 aaPredicted RBP8.78□□□□□ -1
CDH19-202ENST00000454642 NOM1Q5C9Z4 860 aaKnown RBP8.78□□□□□ -1
CDH19-202ENST00000454642 CAPN12Q6ZSI9 719 aa8.78□□□□□ -1
CDH19-202ENST00000454642 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
CDH19-202ENST00000454642 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
CDH19-202ENST00000454642 SEPT3Q9UH03 358 aa8.78□□□□□ -1
CDH19-202ENST00000454642 ARID5BQ14865 1188 aa8.77□□□□□ -1.01
CDH19-202ENST00000454642 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
CDH19-202ENST00000454642 VASH1Q7L8A9 365 aaPredicted RBP8.77□□□□□ -1.01
CDH19-202ENST00000454642 TAS1R3Q7RTX0 852 aa8.77□□□□□ -1.01
CDH19-202ENST00000454642 PURBQ96QR8 312 aaKnown RBP8.77□□□□□ -1.01
CDH19-202ENST00000454642 CDV3Q9UKY7 258 aaKnown RBP8.77□□□□□ -1.01
CDH19-202ENST00000454642 UNC13AQ9UPW8 1703 aa8.77□□□□□ -1.01
CDH19-202ENST00000454642 STAU1O95793 577 aaKnown RBP8.76□□□□□ -1.01
CDH19-202ENST00000454642 TRIM32Q13049 653 aa8.76□□□□□ -1.01
CDH19-202ENST00000454642 MTMR3Q13615 1198 aa8.76□□□□□ -1.01
CDH19-202ENST00000454642 ERVH48-1M5A8F1 160 aa8.75□□□□□ -1.01
CDH19-202ENST00000454642 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
CDH19-202ENST00000454642 GLYCTKQ8IVS8 523 aa8.75□□□□□ -1.01
CDH19-202ENST00000454642 GTF3C2Q8WUA4 911 aaPredicted RBP8.75□□□□□ -1.01
CDH19-202ENST00000454642 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
CDH19-202ENST00000454642 FKBP5Q13451 457 aaPredicted RBP8.75□□□□□ -1.01
CDH19-202ENST00000454642 INTS6LQ5JSJ4 861 aaKnown RBP8.75□□□□□ -1.01
CDH19-202ENST00000454642 PLA2G2CQ5R387 149 aa8.75□□□□□ -1.01
CDH19-202ENST00000454642 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.75□□□□□ -1.01
CDH19-202ENST00000454642 V9GY48 417 aaPredicted RBP8.75□□□□□ -1.01
CDH19-202ENST00000454642 RBM47A0AV96 593 aaKnown RBP8.74□□□□□ -1.01
CDH19-202ENST00000454642 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
CDH19-202ENST00000454642 SKOR1P84550 965 aa8.74□□□□□ -1.01
CDH19-202ENST00000454642 Q6ZNB5 142 aa8.74□□□□□ -1.01
CDH19-202ENST00000454642 BCL2L13Q9BXK5 485 aa8.74□□□□□ -1.01
CDH19-202ENST00000454642 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
CDH19-202ENST00000454642 ZNF358Q9NW07 568 aa8.74□□□□□ -1.01
CDH19-202ENST00000454642 ANKRD33BA6NCL7 494 aa8.73□□□□□ -1.01
CDH19-202ENST00000454642 WEE1P30291 646 aa8.73□□□□□ -1.01
CDH19-202ENST00000454642 NAA30Q147X3 362 aaPredicted RBP8.73□□□□□ -1.01
CDH19-202ENST00000454642 DNMT3AQ9Y6K1 912 aaPredicted RBP8.73□□□□□ -1.01
CDH19-202ENST00000454642 ICMTO60725 284 aa8.72□□□□□ -1.01
CDH19-202ENST00000454642 VARSP26640 1264 aaKnown RBP8.72□□□□□ -1.01
CDH19-202ENST00000454642 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
CDH19-202ENST00000454642 TMPRSS4Q9NRS4 437 aa8.72□□□□□ -1.01
CDH19-202ENST00000454642 EGFL7Q9UHF1 273 aa8.72□□□□□ -1.01
CDH19-202ENST00000454642 ERCC3P19447 782 aa8.72□□□□□ -1.01
CDH19-202ENST00000454642 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
CDH19-202ENST00000454642 TMEM229AB2RXF0 380 aa8.71□□□□□ -1.02
CDH19-202ENST00000454642 FSHRP23945 695 aa8.71□□□□□ -1.02
CDH19-202ENST00000454642 CCDC125Q86Z20 511 aa8.71□□□□□ -1.02
CDH19-202ENST00000454642 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
CDH19-202ENST00000454642 GIPC2Q8TF65 315 aa8.71□□□□□ -1.02
CDH19-202ENST00000454642 BICRAQ9NZM4 1560 aa8.7□□□□□ -1.02
CDH19-202ENST00000454642 MAPK1P28482 360 aa8.7□□□□□ -1.02
CDH19-202ENST00000454642 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
CDH19-202ENST00000454642 MRRFQ96E11 262 aaKnown RBP8.7□□□□□ -1.02
CDH19-202ENST00000454642 SERTAD1Q9UHV2 236 aa8.7□□□□□ -1.02
CDH19-202ENST00000454642 M0R2N6 131 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 LCE2BO14633 110 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 C21orf2O43822 256 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 ZNF16P17020 682 aaPredicted RBP8.69□□□□□ -1.02
CDH19-202ENST00000454642 GDF10P55107 478 aa8.69□□□□□ -1.02
CDH19-202ENST00000454642 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms