RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 IL13P35225 146 aa16.94■□□□□ 0.3
LINC00343-203ENST00000454555 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
LINC00343-203ENST00000454555 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
LINC00343-203ENST00000454555 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
LINC00343-203ENST00000454555 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
LINC00343-203ENST00000454555 ERBB3P21860 1342 aa16.94■□□□□ 0.3
LINC00343-203ENST00000454555 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
LINC00343-203ENST00000454555 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
LINC00343-203ENST00000454555 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
LINC00343-203ENST00000454555 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
LINC00343-203ENST00000454555 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
LINC00343-203ENST00000454555 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
LINC00343-203ENST00000454555 RUNDC1Q96C34 613 aa16.92■□□□□ 0.3
LINC00343-203ENST00000454555 WDR17Q8IZU2 1322 aa16.91■□□□□ 0.3
LINC00343-203ENST00000454555 EVA1CP58658 441 aa16.91■□□□□ 0.3
LINC00343-203ENST00000454555 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
LINC00343-203ENST00000454555 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
LINC00343-203ENST00000454555 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
LINC00343-203ENST00000454555 BECN1Q14457 450 aa16.9■□□□□ 0.3
LINC00343-203ENST00000454555 UNC5CLQ8IV45 518 aa16.9■□□□□ 0.3
LINC00343-203ENST00000454555 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
LINC00343-203ENST00000454555 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
LINC00343-203ENST00000454555 RGPD5Q99666 1765 aa16.9■□□□□ 0.3
LINC00343-203ENST00000454555 BCAR3O75815 825 aa16.89■□□□□ 0.3
LINC00343-203ENST00000454555 STRN4Q9NRL3 753 aa16.89■□□□□ 0.3
LINC00343-203ENST00000454555 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
LINC00343-203ENST00000454555 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
LINC00343-203ENST00000454555 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
LINC00343-203ENST00000454555 RGS3P49796 1198 aa16.89■□□□□ 0.29
LINC00343-203ENST00000454555 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
LINC00343-203ENST00000454555 EYA1Q99502 592 aa16.89■□□□□ 0.29
LINC00343-203ENST00000454555 USP21Q9UK80 565 aa16.89■□□□□ 0.29
LINC00343-203ENST00000454555 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
LINC00343-203ENST00000454555 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
LINC00343-203ENST00000454555 AFF2P51816 1311 aa16.88■□□□□ 0.29
LINC00343-203ENST00000454555 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
LINC00343-203ENST00000454555 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
LINC00343-203ENST00000454555 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
LINC00343-203ENST00000454555 CRB1P82279 1406 aa16.87■□□□□ 0.29
LINC00343-203ENST00000454555 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
LINC00343-203ENST00000454555 TOM1L2Q6ZVM7 507 aa16.87■□□□□ 0.29
LINC00343-203ENST00000454555 CARD10Q9BWT7 1032 aa16.87■□□□□ 0.29
LINC00343-203ENST00000454555 VPS72Q15906 364 aa16.86■□□□□ 0.29
LINC00343-203ENST00000454555 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
LINC00343-203ENST00000454555 NCAPD2Q15021 1401 aa16.86■□□□□ 0.29
LINC00343-203ENST00000454555 FAM208AQ9UK61 1670 aaKnown RBP16.86■□□□□ 0.29
LINC00343-203ENST00000454555 RGPD1P0DJD0 1748 aa16.85■□□□□ 0.29
LINC00343-203ENST00000454555 U2AF1L5P0DN76 240 aaPredicted RBP16.85■□□□□ 0.29
LINC00343-203ENST00000454555 U2AF1Q01081 240 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00343-203ENST00000454555 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
LINC00343-203ENST00000454555 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
LINC00343-203ENST00000454555 RARSP54136 660 aaKnown RBP16.84■□□□□ 0.29
LINC00343-203ENST00000454555 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
LINC00343-203ENST00000454555 KDRP35968 1356 aa16.84■□□□□ 0.29
LINC00343-203ENST00000454555 IGHDP01880 384 aa16.84■□□□□ 0.29
LINC00343-203ENST00000454555 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
LINC00343-203ENST00000454555 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
LINC00343-203ENST00000454555 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
LINC00343-203ENST00000454555 FCHSD2O94868 740 aa16.83■□□□□ 0.28
LINC00343-203ENST00000454555 ZNF772Q68DY9 489 aaPredicted RBP16.83■□□□□ 0.28
LINC00343-203ENST00000454555 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.28
LINC00343-203ENST00000454555 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
LINC00343-203ENST00000454555 THRAP3Q9Y2W1 955 aaKnown RBP16.82■□□□□ 0.28
LINC00343-203ENST00000454555 RWDD1Q9H446 243 aaPredicted RBP16.82■□□□□ 0.28
LINC00343-203ENST00000454555 ATRNO75882 1429 aa16.81■□□□□ 0.28
LINC00343-203ENST00000454555 HMOX1P09601 288 aa16.81■□□□□ 0.28
LINC00343-203ENST00000454555 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
LINC00343-203ENST00000454555 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
LINC00343-203ENST00000454555 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
LINC00343-203ENST00000454555 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
LINC00343-203ENST00000454555 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
LINC00343-203ENST00000454555 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
LINC00343-203ENST00000454555 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
LINC00343-203ENST00000454555 GJD4Q96KN9 370 aaPredicted RBP16.79■□□□□ 0.28
LINC00343-203ENST00000454555 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
LINC00343-203ENST00000454555 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
LINC00343-203ENST00000454555 SLC4A3P48751 1232 aa16.79■□□□□ 0.28
LINC00343-203ENST00000454555 BARGINQ6ZT62 677 aa16.79■□□□□ 0.28
LINC00343-203ENST00000454555 FRAT1Q92837 279 aaPredicted RBP16.79■□□□□ 0.28
LINC00343-203ENST00000454555 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
LINC00343-203ENST00000454555 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
LINC00343-203ENST00000454555 PANK1Q8TE04 598 aa16.78■□□□□ 0.28
LINC00343-203ENST00000454555 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
LINC00343-203ENST00000454555 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
LINC00343-203ENST00000454555 IL2RBP14784 551 aa16.77■□□□□ 0.28
LINC00343-203ENST00000454555 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
LINC00343-203ENST00000454555 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
LINC00343-203ENST00000454555 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
LINC00343-203ENST00000454555 DISP2A7MBM2 1401 aa16.76■□□□□ 0.27
LINC00343-203ENST00000454555 TATP17735 454 aaPredicted RBP16.76■□□□□ 0.27
LINC00343-203ENST00000454555 ONECUT3O60422 494 aaPredicted RBP16.75■□□□□ 0.27
LINC00343-203ENST00000454555 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
LINC00343-203ENST00000454555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00343-203ENST00000454555 IL16Q14005 1332 aa16.75■□□□□ 0.27
LINC00343-203ENST00000454555 FRAT2O75474 233 aaPredicted RBP16.74■□□□□ 0.27
LINC00343-203ENST00000454555 MEGF6O75095 1541 aa16.74■□□□□ 0.27
LINC00343-203ENST00000454555 GLI3P10071 1580 aa16.74■□□□□ 0.27
LINC00343-203ENST00000454555 RBM6P78332 1123 aaKnown RBP16.74■□□□□ 0.27
LINC00343-203ENST00000454555 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
LINC00343-203ENST00000454555 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms