RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
HDAC4-205ENST00000454542 TRIM37O94972 964 aa19.24■□□□□ 0.67
HDAC4-205ENST00000454542 MTHFSP49914 203 aa19.24■□□□□ 0.67
HDAC4-205ENST00000454542 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
HDAC4-205ENST00000454542 NUP188Q5SRE5 1749 aa19.24■□□□□ 0.67
HDAC4-205ENST00000454542 TATP17735 454 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-205ENST00000454542 IL13P35225 146 aa19.23■□□□□ 0.67
HDAC4-205ENST00000454542 SF3B2Q13435 895 aaKnown RBP19.23■□□□□ 0.67
HDAC4-205ENST00000454542 DEFB132Q7Z7B7 95 aa19.23■□□□□ 0.67
HDAC4-205ENST00000454542 BTAF1O14981 1849 aa19.23■□□□□ 0.67
HDAC4-205ENST00000454542 BAG6P46379 1132 aa19.22■□□□□ 0.67
HDAC4-205ENST00000454542 ZCRB1Q8TBF4 217 aaKnown RBP19.22■□□□□ 0.67
HDAC4-205ENST00000454542 PCDH11XQ9BZA7 1347 aa19.21■□□□□ 0.67
HDAC4-205ENST00000454542 PCDH11YQ9BZA8 1340 aa19.21■□□□□ 0.67
HDAC4-205ENST00000454542 BCL11BQ9C0K0 894 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-205ENST00000454542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■□□□□ 9.5
HDAC4-205ENST00000454542 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
HDAC4-205ENST00000454542 PTF1AQ7RTS3 328 aa19.18■□□□□ 0.66
HDAC4-205ENST00000454542 CAMKK2Q96RR4 588 aa19.18■□□□□ 0.66
HDAC4-205ENST00000454542 CYP27B1O15528 508 aa19.16■□□□□ 0.66
HDAC4-205ENST00000454542 EN1Q05925 392 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-205ENST00000454542 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
HDAC4-205ENST00000454542 AEBP1Q8IUX7 1158 aa19.16■□□□□ 0.66
HDAC4-205ENST00000454542 DDX54Q8TDD1 881 aaKnown RBP19.16■□□□□ 0.66
HDAC4-205ENST00000454542 PAPPAQ13219 1627 aa19.15■□□□□ 0.66
HDAC4-205ENST00000454542 LY75O60449 1722 aa19.15■□□□□ 0.66
HDAC4-205ENST00000454542 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
HDAC4-205ENST00000454542 APBA3O96018 575 aa19.15■□□□□ 0.66
HDAC4-205ENST00000454542 ITGB4P16144 1822 aa19.15■□□□□ 0.66
HDAC4-205ENST00000454542 PLSCR1O15162 318 aa19.14■□□□□ 0.65
HDAC4-205ENST00000454542 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.65
HDAC4-205ENST00000454542 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
HDAC4-205ENST00000454542 KCNQ2O43526 872 aa19.13■□□□□ 0.65
HDAC4-205ENST00000454542 NKX1-1Q15270 411 aaPredicted RBP19.13■□□□□ 0.65
HDAC4-205ENST00000454542 EZH2Q15910 746 aaKnown RBP19.13■□□□□ 0.65
HDAC4-205ENST00000454542 SPG7Q9UQ90 795 aa19.13■□□□□ 0.65
HDAC4-205ENST00000454542 SULT6B1Q6IMI4 303 aa19.12■□□□□ 0.65
HDAC4-205ENST00000454542 ACSBG1Q96GR2 724 aa19.12■□□□□ 0.65
HDAC4-205ENST00000454542 PHKG2P15735 406 aa19.11■□□□□ 0.65
HDAC4-205ENST00000454542 RALBP1Q15311 655 aa19.1■□□□□ 0.65
HDAC4-205ENST00000454542 KDM6AO15550 1401 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-205ENST00000454542 AMOTQ4VCS5 1084 aa19.09■□□□□ 0.65
HDAC4-205ENST00000454542 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
HDAC4-205ENST00000454542 SCN11AQ9UI33 1791 aa19.09■□□□□ 0.65
HDAC4-205ENST00000454542 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
HDAC4-205ENST00000454542 IFNL2Q8IZJ0 200 aa19.08■□□□□ 0.64
HDAC4-205ENST00000454542 MRC1P22897 1456 aa19.08■□□□□ 0.64
HDAC4-205ENST00000454542 VIRMAQ69YN4 1812 aaKnown RBP19.07■□□□□ 0.64
HDAC4-205ENST00000454542 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-205ENST00000454542 PRIM1P49642 420 aaKnown RBP19.06■□□□□ 0.64
HDAC4-205ENST00000454542 HMOX1P09601 288 aa19.05■□□□□ 0.64
HDAC4-205ENST00000454542 PROM2Q8N271 834 aa19.05■□□□□ 0.64
HDAC4-205ENST00000454542 MYBBP1AQ9BQG0 1328 aaKnown RBP19.04■□□□□ 0.64
HDAC4-205ENST00000454542 KAT6BQ8WYB5 2073 aa19.04■□□□□ 0.64
HDAC4-205ENST00000454542 ZNF530Q6P9A1 599 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-205ENST00000454542 QSER1Q2KHR3 1735 aa19.03■□□□□ 0.64
HDAC4-205ENST00000454542 TXNRD1Q16881 649 aa19.03■□□□□ 0.64
HDAC4-205ENST00000454542 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
HDAC4-205ENST00000454542 CASZ1Q86V15 1759 aa19.03■□□□□ 0.64
HDAC4-205ENST00000454542 ZNF831Q5JPB2 1677 aa19.02■□□□□ 0.64
HDAC4-205ENST00000454542 U2SURPO15042 1029 aaKnown RBP19.02■□□□□ 0.64
HDAC4-205ENST00000454542 HSP90AB1P08238 724 aaKnown RBP19.02■□□□□ 0.64
HDAC4-205ENST00000454542 PRKRIP1Q9H875 184 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-205ENST00000454542 CICQ96RK0 1608 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-205ENST00000454542 C5P01031 1676 aa19.01■□□□□ 0.63
HDAC4-205ENST00000454542 SYTL4Q96C24 671 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-205ENST00000454542 DCAF5Q96JK2 942 aa19.01■□□□□ 0.63
HDAC4-205ENST00000454542 NUDCQ9Y266 331 aa19.01■□□□□ 0.63
HDAC4-205ENST00000454542 TAF1LQ8IZX4 1826 aa19.01■□□□□ 0.63
HDAC4-205ENST00000454542 LRP5O75197 1615 aa19■□□□□ 0.63
HDAC4-205ENST00000454542 ANO8Q9HCE9 1232 aaPredicted RBP19■□□□□ 0.63
HDAC4-205ENST00000454542 SIPA1L3O60292 1781 aaPredicted RBP18.99■□□□□ 0.63
HDAC4-205ENST00000454542 PALLDQ8WX93 1383 aa18.99■□□□□ 0.63
HDAC4-205ENST00000454542 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
HDAC4-205ENST00000454542 AKAP4Q5JQC9 854 aa18.99■□□□□ 0.63
HDAC4-205ENST00000454542 TUBGCP6Q96RT7 1819 aa18.99■□□□□ 0.63
HDAC4-205ENST00000454542 ERVV-2B6SEH9 535 aa18.98■□□□□ 0.63
HDAC4-205ENST00000454542 C1orf141Q5JVX7 400 aa18.98■□□□□ 0.63
HDAC4-205ENST00000454542 SLC27A3Q5K4L6 730 aa18.98■□□□□ 0.63
HDAC4-205ENST00000454542 PIGBQ92521 554 aa18.98■□□□□ 0.63
HDAC4-205ENST00000454542 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
HDAC4-205ENST00000454542 LRRC4BQ9NT99 713 aa18.97■□□□□ 0.63
HDAC4-205ENST00000454542 FCHSD2O94868 740 aa18.96■□□□□ 0.63
HDAC4-205ENST00000454542 MPRIPQ6WCQ1 1025 aa18.96■□□□□ 0.63
HDAC4-205ENST00000454542 TMOD3Q9NYL9 352 aa18.96■□□□□ 0.63
HDAC4-205ENST00000454542 MAP3K5Q99683 1374 aa18.95■□□□□ 0.62
HDAC4-205ENST00000454542 U2AF1L5P0DN76 240 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-205ENST00000454542 U2AF1Q01081 240 aaKnown RBP eCLIP18.95■□□□□ 0.62
HDAC4-205ENST00000454542 GAS2L2Q8NHY3 880 aa18.95■□□□□ 0.62
HDAC4-205ENST00000454542 UBR2Q8IWV8 1755 aa18.95■□□□□ 0.62
HDAC4-205ENST00000454542 COL5A3P25940 1745 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-205ENST00000454542 R3HDM1Q15032 1099 aaKnown RBP18.94■□□□□ 0.62
HDAC4-205ENST00000454542 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
HDAC4-205ENST00000454542 SMARCC1Q92922 1105 aaPredicted RBP18.94■□□□□ 0.62
HDAC4-205ENST00000454542 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
HDAC4-205ENST00000454542 PSDA5PKW4 1024 aaPredicted RBP18.93■□□□□ 0.62
HDAC4-205ENST00000454542 PHACTR3Q96KR7 559 aa18.93■□□□□ 0.62
HDAC4-205ENST00000454542 DLG5Q8TDM6 1919 aa18.93■□□□□ 0.62
HDAC4-205ENST00000454542 CEMIPQ8WUJ3 1361 aa18.93■□□□□ 0.62
HDAC4-205ENST00000454542 TJP1Q07157 1748 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms