RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 FLT4P35916 1363 aa25.76■■□□□ 1.71
UBE2D4-208ENST00000454350 NSD2O96028 1365 aa25.75■■□□□ 1.71
UBE2D4-208ENST00000454350 ZCRB1Q8TBF4 217 aaKnown RBP25.75■■□□□ 1.71
UBE2D4-208ENST00000454350 LRRC4BQ9NT99 713 aa25.75■■□□□ 1.71
UBE2D4-208ENST00000454350 USHBP1Q8N6Y0 703 aa25.74■■□□□ 1.71
UBE2D4-208ENST00000454350 STK32BQ9NY57 414 aa25.74■■□□□ 1.71
UBE2D4-208ENST00000454350 QSER1Q2KHR3 1735 aa25.74■■□□□ 1.71
UBE2D4-208ENST00000454350 TUBGCP6Q96RT7 1819 aa25.73■■□□□ 1.71
UBE2D4-208ENST00000454350 EMILIN1Q9Y6C2 1016 aa25.72■■□□□ 1.71
UBE2D4-208ENST00000454350 NCAPD2Q15021 1401 aa25.71■■□□□ 1.71
UBE2D4-208ENST00000454350 SMG6Q86US8 1419 aaKnown RBP25.71■■□□□ 1.71
UBE2D4-208ENST00000454350 PTGER2P43116 358 aa25.71■■□□□ 1.71
UBE2D4-208ENST00000454350 PKD1L3Q7Z443 1732 aa25.71■■□□□ 1.71
UBE2D4-208ENST00000454350 CGNL1Q0VF96 1302 aa25.7■■□□□ 1.71
UBE2D4-208ENST00000454350 ZBTB7AO95365 584 aa25.7■■□□□ 1.7
UBE2D4-208ENST00000454350 PRIM1P49642 420 aaKnown RBP25.7■■□□□ 1.7
UBE2D4-208ENST00000454350 HSPA5P11021 654 aaKnown RBP25.69■■□□□ 1.7
UBE2D4-208ENST00000454350 ZNF827Q17R98 1081 aa25.69■■□□□ 1.7
UBE2D4-208ENST00000454350 ITGB4P16144 1822 aa25.67■■□□□ 1.7
UBE2D4-208ENST00000454350 EIF4G2P78344 907 aaKnown RBP eCLIP25.67■■□□□ 1.7
UBE2D4-208ENST00000454350 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
UBE2D4-208ENST00000454350 TOGARAM1Q9Y4F4 1720 aa25.67■■□□□ 1.7
UBE2D4-208ENST00000454350 COL24A1Q17RW2 1714 aa25.66■■□□□ 1.7
UBE2D4-208ENST00000454350 SGIP1Q9BQI5 828 aa25.66■■□□□ 1.7
UBE2D4-208ENST00000454350 PPP1R1BQ9UD71 204 aaPredicted RBP25.66■■□□□ 1.7
UBE2D4-208ENST00000454350 RAPGEF4Q8WZA2 1011 aa25.65■■□□□ 1.7
UBE2D4-208ENST00000454350 AKT1S1Q96B36 256 aa25.65■■□□□ 1.7
UBE2D4-208ENST00000454350 ATF5Q9Y2D1 282 aaPredicted RBP25.65■■□□□ 1.7
UBE2D4-208ENST00000454350 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
UBE2D4-208ENST00000454350 WASHC2AQ641Q2 1341 aa25.63■■□□□ 1.69
UBE2D4-208ENST00000454350 TATP17735 454 aaPredicted RBP25.63■■□□□ 1.69
UBE2D4-208ENST00000454350 SYTL4Q96C24 671 aaPredicted RBP25.63■■□□□ 1.69
UBE2D4-208ENST00000454350 POLKQ9UBT6 870 aa25.63■■□□□ 1.69
UBE2D4-208ENST00000454350 MTFR1LQ9H019 292 aa25.62■■□□□ 1.69
UBE2D4-208ENST00000454350 TAF1LQ8IZX4 1826 aa25.61■■□□□ 1.69
UBE2D4-208ENST00000454350 KCNQ4P56696 695 aa25.61■■□□□ 1.69
UBE2D4-208ENST00000454350 POLR3GLQ9BT43 218 aa25.61■■□□□ 1.69
UBE2D4-208ENST00000454350 CYP27B1O15528 508 aa25.6■■□□□ 1.69
UBE2D4-208ENST00000454350 PCDH11XQ9BZA7 1347 aa25.6■■□□□ 1.69
UBE2D4-208ENST00000454350 PCDH11YQ9BZA8 1340 aa25.6■■□□□ 1.69
UBE2D4-208ENST00000454350 PPM1GO15355 546 aaPredicted RBP25.58■■□□□ 1.69
UBE2D4-208ENST00000454350 EYA1Q99502 592 aa25.58■■□□□ 1.69
UBE2D4-208ENST00000454350 PANK3Q9H999 370 aa25.58■■□□□ 1.69
UBE2D4-208ENST00000454350 C5P01031 1676 aa25.57■■□□□ 1.68
UBE2D4-208ENST00000454350 PNPLA7Q6ZV29 1317 aa25.56■■□□□ 1.68
UBE2D4-208ENST00000454350 UTRNP46939 3433 aa25.52■■□□□ 1.68
UBE2D4-208ENST00000454350 TNNT2P45379 298 aaPredicted RBP25.52■■□□□ 1.68
UBE2D4-208ENST00000454350 EIF4A2Q14240 407 aaKnown RBP25.52■■□□□ 1.68
UBE2D4-208ENST00000454350 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
UBE2D4-208ENST00000454350 FHDC1Q9C0D6 1143 aaPredicted RBP25.52■■□□□ 1.68
UBE2D4-208ENST00000454350 CCNL1Q9UK58 526 aaPredicted RBP25.52■■□□□ 1.68
UBE2D4-208ENST00000454350 SYT17Q9BSW7 474 aa25.51■■□□□ 1.67
UBE2D4-208ENST00000454350 SLC16A10Q8TF71 515 aa25.5■■□□□ 1.67
UBE2D4-208ENST00000454350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.49■■□□□ 1.67
UBE2D4-208ENST00000454350 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
UBE2D4-208ENST00000454350 ARXQ96QS3 562 aa25.48■■□□□ 1.67
UBE2D4-208ENST00000454350 TFCP2L1Q9NZI6 479 aa25.48■■□□□ 1.67
UBE2D4-208ENST00000454350 PALLDQ8WX93 1383 aa25.47■■□□□ 1.67
UBE2D4-208ENST00000454350 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
UBE2D4-208ENST00000454350 SPG7Q9UQ90 795 aa25.46■■□□□ 1.67
UBE2D4-208ENST00000454350 UBR3Q6ZT12 1888 aa25.45■■□□□ 1.67
UBE2D4-208ENST00000454350 IGSF1Q8N6C5 1336 aa25.45■■□□□ 1.66
UBE2D4-208ENST00000454350 PIGBQ92521 554 aa25.45■■□□□ 1.66
UBE2D4-208ENST00000454350 C4BP0C0L5 1744 aa25.45■■□□□ 1.66
UBE2D4-208ENST00000454350 PLEKHG2Q9H7P9 1386 aa25.44■■□□□ 1.66
UBE2D4-208ENST00000454350 CHD4Q14839 1912 aa25.43■■□□□ 1.66
UBE2D4-208ENST00000454350 COL23A1Q86Y22 540 aaPredicted RBP25.43■■□□□ 1.66
UBE2D4-208ENST00000454350 KIF7Q2M1P5 1343 aa25.42■■□□□ 1.66
UBE2D4-208ENST00000454350 PHKG2P15735 406 aa25.42■■□□□ 1.66
UBE2D4-208ENST00000454350 YY1P25490 414 aa25.41■■□□□ 1.66
UBE2D4-208ENST00000454350 AMER1Q5JTC6 1135 aaPredicted RBP25.4■■□□□ 1.66
UBE2D4-208ENST00000454350 IFNL2Q8IZJ0 200 aa25.4■■□□□ 1.66
UBE2D4-208ENST00000454350 DCAF8L1A6NGE4 600 aa25.39■■□□□ 1.66
UBE2D4-208ENST00000454350 MORC1Q86VD1 984 aa25.39■■□□□ 1.66
UBE2D4-208ENST00000454350 SMARCC1Q92922 1105 aaPredicted RBP25.39■■□□□ 1.66
UBE2D4-208ENST00000454350 AMIGO3Q86WK7 504 aa25.38■■□□□ 1.65
UBE2D4-208ENST00000454350 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
UBE2D4-208ENST00000454350 GOLGB1Q14789 3259 aaKnown RBP25.36■■□□□ 1.65
UBE2D4-208ENST00000454350 POLD1P28340 1107 aa25.35■■□□□ 1.65
UBE2D4-208ENST00000454350 ASAP1Q9ULH1 1129 aa25.35■■□□□ 1.65
UBE2D4-208ENST00000454350 ZNF831Q5JPB2 1677 aa25.35■■□□□ 1.65
UBE2D4-208ENST00000454350 PER1O15534 1290 aaPredicted RBP25.34■■□□□ 1.65
UBE2D4-208ENST00000454350 AEBP1Q8IUX7 1158 aa25.34■■□□□ 1.65
UBE2D4-208ENST00000454350 TMOD3Q9NYL9 352 aa25.34■■□□□ 1.65
UBE2D4-208ENST00000454350 LOC102724428A0A0B4J2F2 783 aa25.33■■□□□ 1.65
UBE2D4-208ENST00000454350 SIK1P57059 783 aa25.33■■□□□ 1.65
UBE2D4-208ENST00000454350 KDM6AO15550 1401 aaPredicted RBP25.32■■□□□ 1.64
UBE2D4-208ENST00000454350 ATG3Q9NT62 314 aa25.32■■□□□ 1.64
UBE2D4-208ENST00000454350 KDRP35968 1356 aa25.31■■□□□ 1.64
UBE2D4-208ENST00000454350 VIRMAQ69YN4 1812 aaKnown RBP25.31■■□□□ 1.64
UBE2D4-208ENST00000454350 IL13P35225 146 aa25.31■■□□□ 1.64
UBE2D4-208ENST00000454350 LINC00116Q8NCU8 138 aa25.31■■□□□ 1.64
UBE2D4-208ENST00000454350 COL5A3P25940 1745 aaPredicted RBP25.3■■□□□ 1.64
UBE2D4-208ENST00000454350 MSH5O43196 834 aa25.3■■□□□ 1.64
UBE2D4-208ENST00000454350 HMGB2P26583 209 aaKnown RBP25.3■■□□□ 1.64
UBE2D4-208ENST00000454350 ITPK1Q13572 414 aa25.3■■□□□ 1.64
UBE2D4-208ENST00000454350 SMIM5Q71RC9 77 aa25.3■■□□□ 1.64
UBE2D4-208ENST00000454350 SCN11AQ9UI33 1791 aa25.3■■□□□ 1.64
UBE2D4-208ENST00000454350 MSL1Q68DK7 614 aa25.29■■□□□ 1.64
UBE2D4-208ENST00000454350 FLAD1Q8NFF5 587 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms