RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 IL13P35225 146 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 ORAI2Q96SN7 254 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 TMEM106CQ9BVX2 250 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 USP19O94966 1318 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 ZNF335Q9H4Z2 1342 aaPredicted RBP7.92□□□□□ -1.14
MSH6-205ENST00000454137 FANCIQ9NVI1 1328 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 PXDNQ92626 1479 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 CRYBG1Q9Y4K1 1723 aa7.92□□□□□ -1.14
MSH6-205ENST00000454137 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
MSH6-205ENST00000454137 KRT28Q7Z3Y7 464 aa7.91□□□□□ -1.14
MSH6-205ENST00000454137 ABTB2Q8N961 1025 aa7.91□□□□□ -1.14
MSH6-205ENST00000454137 PLEKHF1Q96S99 279 aa7.91□□□□□ -1.14
MSH6-205ENST00000454137 SALL2Q9Y467 1007 aaPredicted RBP7.91□□□□□ -1.14
MSH6-205ENST00000454137 PLEKHG2Q9H7P9 1386 aa7.91□□□□□ -1.14
MSH6-205ENST00000454137 ARHGEF10O15013 1369 aa7.9□□□□□ -1.14
MSH6-205ENST00000454137 RNF123Q5XPI4 1314 aa7.9□□□□□ -1.14
MSH6-205ENST00000454137 U2AF1L5P0DN76 240 aaPredicted RBP7.9□□□□□ -1.14
MSH6-205ENST00000454137 IRX6P78412 446 aaPredicted RBP7.9□□□□□ -1.14
MSH6-205ENST00000454137 U2AF1Q01081 240 aaKnown RBP eCLIP7.9□□□□□ -1.14
MSH6-205ENST00000454137 WDR63Q8IWG1 891 aa7.9□□□□□ -1.14
MSH6-205ENST00000454137 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
MSH6-205ENST00000454137 TRMT2AQ8IZ69 625 aaKnown RBP7.9□□□□□ -1.14
MSH6-205ENST00000454137 RBM33Q96EV2 1170 aaKnown RBP7.9□□□□□ -1.14
MSH6-205ENST00000454137 SLAIN2Q9P270 581 aa7.9□□□□□ -1.14
MSH6-205ENST00000454137 EMILIN1Q9Y6C2 1016 aa7.9□□□□□ -1.14
MSH6-205ENST00000454137 TNS3Q68CZ2 1445 aa7.89□□□□□ -1.15
MSH6-205ENST00000454137 KDRP35968 1356 aa7.89□□□□□ -1.15
MSH6-205ENST00000454137 SOS2Q07890 1332 aaPredicted RBP7.89□□□□□ -1.15
MSH6-205ENST00000454137 MAP3K19Q56UN5 1328 aa7.89□□□□□ -1.15
MSH6-205ENST00000454137 C19orf67A6NJJ6 358 aa7.89□□□□□ -1.15
MSH6-205ENST00000454137 FOXO3O43524 673 aa7.89□□□□□ -1.15
MSH6-205ENST00000454137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.89□□□□□ -1.15
MSH6-205ENST00000454137 FAM208AQ9UK61 1670 aaKnown RBP7.89□□□□□ -1.15
MSH6-205ENST00000454137 CAMTA1Q9Y6Y1 1673 aa7.89□□□□□ -1.15
MSH6-205ENST00000454137 IL16Q14005 1332 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 SPATA31A3Q5VYP0 1347 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 APAF1O14727 1248 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 NEFMP07197 916 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 TIE1P35590 1138 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 RRS1Q15050 365 aaKnown RBP7.88□□□□□ -1.15
MSH6-205ENST00000454137 LMOD2Q6P5Q4 547 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 BRINP3Q76B58 766 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 TCP11L2Q8N4U5 519 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 IP6K1Q92551 441 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 CDCA7LQ96GN5 454 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 RSPH6AQ9H0K4 717 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 AHDC1Q5TGY3 1603 aaPredicted RBP7.88□□□□□ -1.15
MSH6-205ENST00000454137 DLG5Q8TDM6 1919 aa7.88□□□□□ -1.15
MSH6-205ENST00000454137 NCAPD2Q15021 1401 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 CPDO75976 1380 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 IGSF1Q8N6C5 1336 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 E9PSI1 815 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 GCP02774 474 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 HOXC9P31274 260 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 CLCN6P51797 869 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 SLFN5Q08AF3 891 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 EIF4A2Q14240 407 aaKnown RBP7.87□□□□□ -1.15
MSH6-205ENST00000454137 ARHGEF25Q86VW2 580 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 WWC1Q8IX03 1113 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 MS4A3Q96HJ5 214 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 MS4A4AQ96JQ5 239 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 COL18A1P39060 1754 aa7.87□□□□□ -1.15
MSH6-205ENST00000454137 MAPK8IP3Q9UPT6 1336 aa7.86□□□□□ -1.15
MSH6-205ENST00000454137 U2SURPO15042 1029 aaKnown RBP7.86□□□□□ -1.15
MSH6-205ENST00000454137 FBLN1P23142 703 aa7.86□□□□□ -1.15
MSH6-205ENST00000454137 TMPOP42166 694 aaKnown RBP7.86□□□□□ -1.15
MSH6-205ENST00000454137 AMPHP49418 695 aa7.86□□□□□ -1.15
MSH6-205ENST00000454137 MFSD10Q14728 455 aa7.86□□□□□ -1.15
MSH6-205ENST00000454137 LARP6Q9BRS8 491 aaKnown RBP7.86□□□□□ -1.15
MSH6-205ENST00000454137 LMO7Q8WWI1 1683 aa7.86□□□□□ -1.15
MSH6-205ENST00000454137 COL22A1Q8NFW1 1626 aaPredicted RBP7.85□□□□□ -1.15
MSH6-205ENST00000454137 PPM1GO15355 546 aaPredicted RBP7.85□□□□□ -1.15
MSH6-205ENST00000454137 CT47B1P0C2W7 299 aaPredicted RBP7.85□□□□□ -1.15
MSH6-205ENST00000454137 CALD1Q05682 793 aaKnown RBP7.85□□□□□ -1.15
MSH6-205ENST00000454137 LMOD3Q0VAK6 560 aa7.85□□□□□ -1.15
MSH6-205ENST00000454137 HSP90AB2PQ58FF8 381 aa7.85□□□□□ -1.15
MSH6-205ENST00000454137 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
MSH6-205ENST00000454137 SMYD5Q6GMV2 418 aa7.85□□□□□ -1.15
MSH6-205ENST00000454137 CRISPLD2Q9H0B8 497 aa7.85□□□□□ -1.15
MSH6-205ENST00000454137 ABCA3Q99758 1704 aa7.85□□□□□ -1.15
MSH6-205ENST00000454137 ROBO1Q9Y6N7 1651 aa7.84□□□□□ -1.15
MSH6-205ENST00000454137 HTATSF1O43719 755 aaKnown RBP7.84□□□□□ -1.15
MSH6-205ENST00000454137 PRKAR2BP31323 418 aa7.84□□□□□ -1.15
MSH6-205ENST00000454137 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
MSH6-205ENST00000454137 DDX27Q96GQ7 796 aaKnown RBP7.84□□□□□ -1.15
MSH6-205ENST00000454137 RCAN3Q9UKA8 241 aa7.84□□□□□ -1.15
MSH6-205ENST00000454137 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
MSH6-205ENST00000454137 B4GALNT3Q6L9W6 998 aa7.83□□□□□ -1.16
MSH6-205ENST00000454137 ILDR1Q86SU0 546 aaPredicted RBP7.83□□□□□ -1.16
MSH6-205ENST00000454137 MYH16Q9H6N6 1097 aa7.83□□□□□ -1.16
MSH6-205ENST00000454137 TRIM35Q9UPQ4 493 aa7.83□□□□□ -1.16
MSH6-205ENST00000454137 RGPD5Q99666 1765 aa7.83□□□□□ -1.16
MSH6-205ENST00000454137 RIPK4P57078 832 aa7.82□□□□□ -1.16
MSH6-205ENST00000454137 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
MSH6-205ENST00000454137 EYA1Q99502 592 aa7.82□□□□□ -1.16
MSH6-205ENST00000454137 RRP7AQ9Y3A4 280 aaKnown RBP7.82□□□□□ -1.16
MSH6-205ENST00000454137 RGPD2P0DJD1 1756 aa7.82□□□□□ -1.16
MSH6-205ENST00000454137 TESPA1A2RU30 521 aaPredicted RBP7.81□□□□□ -1.16
MSH6-205ENST00000454137 TTLL13PA6NNM8 815 aa7.81□□□□□ -1.16
MSH6-205ENST00000454137 RRP1P56182 461 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms