RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 ITPKCQ96DU7 683 aa6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 C1QTNF2Q9BXJ5 285 aa6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 ZMIZ1Q9ULJ6 1067 aa6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 PCDHB9Q9Y5E1 797 aa6.69□□□□□ -1.34
HMGB1P15-201ENST00000453854 CARNS1A5YM72 827 aa6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 WIPF1O43516 503 aa6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 MAP7D1Q3KQU3 841 aa6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 ZBTB33Q86T24 672 aa6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 PURBQ96QR8 312 aaKnown RBP6.68□□□□□ -1.34
HMGB1P15-201ENST00000453854 SOBPA7XYQ1 873 aa6.67□□□□□ -1.34
HMGB1P15-201ENST00000453854 ZIC2O95409 532 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P15-201ENST00000453854 PLPP7Q8NBV4 271 aa6.67□□□□□ -1.34
HMGB1P15-201ENST00000453854 MKRN1Q9UHC7 482 aaKnown RBP6.67□□□□□ -1.34
HMGB1P15-201ENST00000453854 ATP5J2-PTCD1G3V325 749 aa6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 PTK7Q13308 1070 aa6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 NCOA4Q13772 614 aa6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 ERFEQ4G0M1 354 aa6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 TMEM164Q5U3C3 297 aa6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 DEPDC4Q8N2C3 294 aa6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 NXF1Q9UBU9 619 aaKnown RBP6.66□□□□□ -1.34
HMGB1P15-201ENST00000453854 MAGEB6P1A0A0J9YX57 407 aa6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 NR5A1Q13285 461 aa6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 TSGA10IPQ3SY00 556 aa6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 CRTC2Q53ET0 693 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 STK32AQ8WU08 396 aa6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 CARD14Q9BXL6 1004 aa6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 NOVA2Q9UNW9 492 aaKnown RBP6.65□□□□□ -1.34
HMGB1P15-201ENST00000453854 USP17L15C9J2P7 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L13C9JLJ4 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L12C9JPN9 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L11C9JVI0 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L21D6R901 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L18D6R9N7 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L22D6RA61 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L17D6RBQ6 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L19D6RCP7 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L20D6RJB6 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 FSHRP23945 695 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 USP17L24Q0WX57 530 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 DZIP3Q86Y13 1208 aaKnown RBP6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 TRMT44Q8IYL2 757 aaKnown RBP6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 ERBB4Q15303 1308 aa6.64□□□□□ -1.35
HMGB1P15-201ENST00000453854 ESPNB1AK53 854 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 H3BM21 787 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 RASA1P20936 1047 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 GMPRP36959 345 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 FAM69CQ0P6D2 419 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 EML3Q32P44 896 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 C6orf118Q5T5N4 469 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 MAP4K5Q9Y4K4 846 aa6.63□□□□□ -1.35
HMGB1P15-201ENST00000453854 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 SCARF1Q14162 830 aa6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 RNF20Q5VTR2 975 aa6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 B4GALNT3Q6L9W6 998 aa6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 LARP1Q6PKG0 1096 aaKnown RBP6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 CCDC125Q86Z20 511 aa6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 CDCA7Q9BWT1 371 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P15-201ENST00000453854 DKK1O94907 266 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 CLDN10P78369 228 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 TMCO4Q5TGY1 634 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 PHLDB3Q6NSJ2 640 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 TRIM50Q86XT4 487 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 ANKMY2Q8IV38 441 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 SEPT12Q8IYM1 358 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 LARGE2Q8N3Y3 721 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 OGFOD1Q8N543 542 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 MEIOBQ8N635 442 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 CLP1Q92989 425 aaKnown RBP6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 SLAIN2Q9P270 581 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
HMGB1P15-201ENST00000453854 ZBTB7BO15156 539 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 SSFA2P28290 1259 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 NBPF20Q3BBV1 942 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 NPAS3Q8IXF0 933 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 SIX5Q8N196 739 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 RGS22Q8NE09 1264 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 FAM200AQ8TCP9 573 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 SLC16A10Q8TF71 515 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 SLC10A4Q96EP9 437 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 DOLKQ9UPQ8 538 aa6.6□□□□□ -1.35
HMGB1P15-201ENST00000453854 BMP2P12643 396 aa6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 ATP1A2P50993 1020 aa6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 SWI5Q1ZZU3 235 aa6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 TXNDC2Q86VQ3 553 aa6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 CCDC116Q8IYX3 515 aa6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 DNAAF2Q9NVR5 837 aaKnown RBP6.59□□□□□ -1.35
HMGB1P15-201ENST00000453854 IVNS1ABPQ9Y6Y0 642 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms