RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 DOT1LQ8TEK3 1739 aa20.01■□□□□ 0.79
HSPG2-207ENST00000453796 PSDA5PKW4 1024 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-207ENST00000453796 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-207ENST00000453796 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-207ENST00000453796 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-207ENST00000453796 AMER1Q5JTC6 1135 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-207ENST00000453796 KNSTRNQ9Y448 316 aa19.99■□□□□ 0.79
HSPG2-207ENST00000453796 LRP5O75197 1615 aa19.98■□□□□ 0.79
HSPG2-207ENST00000453796 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
HSPG2-207ENST00000453796 ACSBG1Q96GR2 724 aa19.98■□□□□ 0.79
HSPG2-207ENST00000453796 PROM2Q8N271 834 aa19.97■□□□□ 0.79
HSPG2-207ENST00000453796 DDX54Q8TDD1 881 aaKnown RBP19.97■□□□□ 0.79
HSPG2-207ENST00000453796 R3HDM1Q15032 1099 aaKnown RBP19.96■□□□□ 0.79
HSPG2-207ENST00000453796 RAPGEF4Q8WZA2 1011 aa19.96■□□□□ 0.79
HSPG2-207ENST00000453796 TATP17735 454 aaPredicted RBP19.95■□□□□ 0.78
HSPG2-207ENST00000453796 MORC1Q86VD1 984 aa19.95■□□□□ 0.78
HSPG2-207ENST00000453796 EYA1Q99502 592 aa19.95■□□□□ 0.78
HSPG2-207ENST00000453796 EIF4A2Q14240 407 aaKnown RBP19.94■□□□□ 0.78
HSPG2-207ENST00000453796 PAPPAQ13219 1627 aa19.92■□□□□ 0.78
HSPG2-207ENST00000453796 TOGARAM1Q9Y4F4 1720 aa19.92■□□□□ 0.78
HSPG2-207ENST00000453796 LY75O60449 1722 aa19.91■□□□□ 0.78
HSPG2-207ENST00000453796 ITGB4P16144 1822 aa19.91■□□□□ 0.78
HSPG2-207ENST00000453796 TXNRD1Q16881 649 aa19.91■□□□□ 0.78
HSPG2-207ENST00000453796 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
HSPG2-207ENST00000453796 NBPF14Q5TI25 921 aa19.9■□□□□ 0.78
HSPG2-207ENST00000453796 ANO8Q9HCE9 1232 aaPredicted RBP19.9■□□□□ 0.78
HSPG2-207ENST00000453796 IGSF1Q8N6C5 1336 aa19.9■□□□□ 0.78
HSPG2-207ENST00000453796 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
HSPG2-207ENST00000453796 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
HSPG2-207ENST00000453796 CYP27B1O15528 508 aa19.89■□□□□ 0.77
HSPG2-207ENST00000453796 CASZ1Q86V15 1759 aa19.89■□□□□ 0.77
HSPG2-207ENST00000453796 PLEKHG2Q9H7P9 1386 aa19.88■□□□□ 0.77
HSPG2-207ENST00000453796 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
HSPG2-207ENST00000453796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
HSPG2-207ENST00000453796 NKX1-1Q15270 411 aaPredicted RBP19.84■□□□□ 0.77
HSPG2-207ENST00000453796 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
HSPG2-207ENST00000453796 IL13P35225 146 aa19.83■□□□□ 0.77
HSPG2-207ENST00000453796 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
HSPG2-207ENST00000453796 LRRC4BQ9NT99 713 aa19.83■□□□□ 0.77
HSPG2-207ENST00000453796 SPG7Q9UQ90 795 aa19.83■□□□□ 0.77
HSPG2-207ENST00000453796 QSER1Q2KHR3 1735 aa19.82■□□□□ 0.76
HSPG2-207ENST00000453796 MTHFSP49914 203 aa19.82■□□□□ 0.76
HSPG2-207ENST00000453796 KDRP35968 1356 aa19.82■□□□□ 0.76
HSPG2-207ENST00000453796 TUBGCP6Q96RT7 1819 aa19.81■□□□□ 0.76
HSPG2-207ENST00000453796 SLC15A2Q16348 729 aa19.81■□□□□ 0.76
HSPG2-207ENST00000453796 TAF1LQ8IZX4 1826 aa19.8■□□□□ 0.76
HSPG2-207ENST00000453796 COL3A1P02461 1466 aaPredicted RBP19.79■□□□□ 0.76
HSPG2-207ENST00000453796 PHKG2P15735 406 aa19.79■□□□□ 0.76
HSPG2-207ENST00000453796 SLC27A3Q5K4L6 730 aa19.79■□□□□ 0.76
HSPG2-207ENST00000453796 AEBP1Q8IUX7 1158 aa19.79■□□□□ 0.76
HSPG2-207ENST00000453796 STK32BQ9NY57 414 aa19.79■□□□□ 0.76
HSPG2-207ENST00000453796 IFNL2Q8IZJ0 200 aa19.78■□□□□ 0.76
HSPG2-207ENST00000453796 PDGFDQ9GZP0 370 aaPredicted RBP19.78■□□□□ 0.76
HSPG2-207ENST00000453796 C5P01031 1676 aa19.76■□□□□ 0.75
HSPG2-207ENST00000453796 ZNF827Q17R98 1081 aa19.76■□□□□ 0.75
HSPG2-207ENST00000453796 VIRMAQ69YN4 1812 aaKnown RBP19.75■□□□□ 0.75
HSPG2-207ENST00000453796 SULT6B1Q6IMI4 303 aa19.75■□□□□ 0.75
HSPG2-207ENST00000453796 MPRIPQ6WCQ1 1025 aa19.75■□□□□ 0.75
HSPG2-207ENST00000453796 AKT1S1Q96B36 256 aa19.75■□□□□ 0.75
HSPG2-207ENST00000453796 KCNQ4P56696 695 aa19.74■□□□□ 0.75
HSPG2-207ENST00000453796 PLEKHO1Q53GL0 409 aaPredicted RBP19.74■□□□□ 0.75
HSPG2-207ENST00000453796 PIGBQ92521 554 aa19.74■□□□□ 0.75
HSPG2-207ENST00000453796 SCN11AQ9UI33 1791 aa19.73■□□□□ 0.75
HSPG2-207ENST00000453796 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
HSPG2-207ENST00000453796 AMOTQ4VCS5 1084 aa19.73■□□□□ 0.75
HSPG2-207ENST00000453796 SPON1Q9HCB6 807 aa19.73■□□□□ 0.75
HSPG2-207ENST00000453796 PALLDQ8WX93 1383 aa19.72■□□□□ 0.75
HSPG2-207ENST00000453796 KDM6AO15550 1401 aaPredicted RBP19.72■□□□□ 0.75
HSPG2-207ENST00000453796 COL24A1Q17RW2 1714 aa19.72■□□□□ 0.75
HSPG2-207ENST00000453796 CCNL1Q9UK58 526 aaPredicted RBP19.72■□□□□ 0.75
HSPG2-207ENST00000453796 DIAPH1O60610 1272 aaKnown RBP19.71■□□□□ 0.75
HSPG2-207ENST00000453796 ZNF530Q6P9A1 599 aaPredicted RBP19.7■□□□□ 0.74
HSPG2-207ENST00000453796 SMARCC1Q92922 1105 aaPredicted RBP19.69■□□□□ 0.74
HSPG2-207ENST00000453796 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
HSPG2-207ENST00000453796 TMOD3Q9NYL9 352 aa19.69■□□□□ 0.74
HSPG2-207ENST00000453796 ZNF831Q5JPB2 1677 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 ERVV-2B6SEH9 535 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 ZBTB7AO95365 584 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 HSP90AB1P08238 724 aaKnown RBP19.68■□□□□ 0.74
HSPG2-207ENST00000453796 HMOX1P09601 288 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 PNPLA7Q6ZV29 1317 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
HSPG2-207ENST00000453796 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
HSPG2-207ENST00000453796 PTGER2P43116 358 aa19.67■□□□□ 0.74
HSPG2-207ENST00000453796 ASAP1Q9ULH1 1129 aa19.67■□□□□ 0.74
HSPG2-207ENST00000453796 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
HSPG2-207ENST00000453796 SGIP1Q9BQI5 828 aa19.66■□□□□ 0.74
HSPG2-207ENST00000453796 MTFR1LQ9H019 292 aa19.66■□□□□ 0.74
HSPG2-207ENST00000453796 C1orf141Q5JVX7 400 aa19.65■□□□□ 0.74
HSPG2-207ENST00000453796 ATG3Q9NT62 314 aa19.65■□□□□ 0.74
HSPG2-207ENST00000453796 TFCP2L1Q9NZI6 479 aa19.64■□□□□ 0.73
HSPG2-207ENST00000453796 ATF5Q9Y2D1 282 aaPredicted RBP19.64■□□□□ 0.73
HSPG2-207ENST00000453796 COL5A3P25940 1745 aaPredicted RBP19.63■□□□□ 0.73
HSPG2-207ENST00000453796 LOC102724428A0A0B4J2F2 783 aa19.63■□□□□ 0.73
HSPG2-207ENST00000453796 SIK1P57059 783 aa19.63■□□□□ 0.73
HSPG2-207ENST00000453796 AKAP4Q5JQC9 854 aa19.63■□□□□ 0.73
HSPG2-207ENST00000453796 MRC1P22897 1456 aa19.62■□□□□ 0.73
HSPG2-207ENST00000453796 SLC16A10Q8TF71 515 aa19.62■□□□□ 0.73
HSPG2-207ENST00000453796 HMGB2P26583 209 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms