RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
LMO3-210ENST00000453727 KDRP35968 1356 aa10.94□□□□□ -0.66
LMO3-210ENST00000453727 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
LMO3-210ENST00000453727 PHLPP1O60346 1717 aa10.93□□□□□ -0.66
LMO3-210ENST00000453727 CPDO75976 1380 aa10.93□□□□□ -0.66
LMO3-210ENST00000453727 RGPD2P0DJD1 1756 aa10.93□□□□□ -0.66
LMO3-210ENST00000453727 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
LMO3-210ENST00000453727 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
LMO3-210ENST00000453727 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
LMO3-210ENST00000453727 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
LMO3-210ENST00000453727 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
LMO3-210ENST00000453727 ERBB3P21860 1342 aa10.92□□□□□ -0.66
LMO3-210ENST00000453727 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
LMO3-210ENST00000453727 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
LMO3-210ENST00000453727 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
LMO3-210ENST00000453727 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
LMO3-210ENST00000453727 A0A0U1RQG5 324 aaPredicted RBP10.91□□□□□ -0.66
LMO3-210ENST00000453727 USHBP1Q8N6Y0 703 aa10.91□□□□□ -0.66
LMO3-210ENST00000453727 THUMPD2Q9BTF0 503 aaKnown RBP10.91□□□□□ -0.66
LMO3-210ENST00000453727 IL16Q14005 1332 aa10.91□□□□□ -0.66
LMO3-210ENST00000453727 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
LMO3-210ENST00000453727 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
LMO3-210ENST00000453727 COL18A1P39060 1754 aa10.9□□□□□ -0.66
LMO3-210ENST00000453727 FAM83GA6ND36 823 aa10.9□□□□□ -0.66
LMO3-210ENST00000453727 MTHFSDQ2M296 383 aaKnown RBP10.89□□□□□ -0.67
LMO3-210ENST00000453727 PLIN1O60240 522 aa10.89□□□□□ -0.67
LMO3-210ENST00000453727 CSB-PGBD3P0DP91 1061 aa10.89□□□□□ -0.67
LMO3-210ENST00000453727 LMOD3Q0VAK6 560 aa10.89□□□□□ -0.67
LMO3-210ENST00000453727 DCTN1Q14203 1278 aa10.89□□□□□ -0.67
LMO3-210ENST00000453727 NFKBIBQ15653 356 aa10.89□□□□□ -0.67
LMO3-210ENST00000453727 ABCC6O95255 1503 aa10.89□□□□□ -0.67
LMO3-210ENST00000453727 COL22A1Q8NFW1 1626 aaPredicted RBP10.89□□□□□ -0.67
LMO3-210ENST00000453727 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
LMO3-210ENST00000453727 NAP1L5Q96NT1 182 aaPredicted RBP10.88□□□□□ -0.67
LMO3-210ENST00000453727 NLRP2Q9NX02 1062 aa10.88□□□□□ -0.67
LMO3-210ENST00000453727 CAMTA1Q9Y6Y1 1673 aa10.87□□□□□ -0.67
LMO3-210ENST00000453727 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
LMO3-210ENST00000453727 BCAR3O75815 825 aa10.87□□□□□ -0.67
LMO3-210ENST00000453727 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
LMO3-210ENST00000453727 EXOSC9Q06265 439 aaKnown RBP10.87□□□□□ -0.67
LMO3-210ENST00000453727 MCM10Q7L590 875 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 NCAPD2Q15021 1401 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 LMO7Q8WWI1 1683 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 ZNF853P0CG23 659 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 FGD1P98174 961 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 GAS2L2Q8NHY3 880 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 IFT57Q9NWB7 429 aa10.86□□□□□ -0.67
LMO3-210ENST00000453727 COL5A2P05997 1499 aaPredicted RBP10.85□□□□□ -0.67
LMO3-210ENST00000453727 WDR17Q8IZU2 1322 aa10.85□□□□□ -0.67
LMO3-210ENST00000453727 NUTM2BA6NNL0 878 aaPredicted RBP10.85□□□□□ -0.67
LMO3-210ENST00000453727 NUTM2EB1AL46 878 aaPredicted RBP10.85□□□□□ -0.67
LMO3-210ENST00000453727 ADAMTS2O95450 1211 aa10.85□□□□□ -0.67
LMO3-210ENST00000453727 GNAI1P63096 354 aa10.85□□□□□ -0.67
LMO3-210ENST00000453727 NUTM2AQ8IVF1 878 aaPredicted RBP10.85□□□□□ -0.67
LMO3-210ENST00000453727 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
LMO3-210ENST00000453727 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
LMO3-210ENST00000453727 TOM1L2Q6ZVM7 507 aa10.85□□□□□ -0.67
LMO3-210ENST00000453727 STRN4Q9NRL3 753 aa10.85□□□□□ -0.67
LMO3-210ENST00000453727 BTG4Q9NY30 223 aa10.85□□□□□ -0.67
LMO3-210ENST00000453727 EVA1CP58658 441 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 PDE4CQ08493 712 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 C20orf194Q5TEA3 1177 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 MBIPQ9NS73 344 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 JCADQ9P266 1359 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 FAM208AQ9UK61 1670 aaKnown RBP10.84□□□□□ -0.67
LMO3-210ENST00000453727 AAMPQ13685 434 aa10.84□□□□□ -0.67
LMO3-210ENST00000453727 CT47B1P0C2W7 299 aaPredicted RBP10.83□□□□□ -0.68
LMO3-210ENST00000453727 PDE4AP27815 886 aa10.83□□□□□ -0.68
LMO3-210ENST00000453727 EXOC6Q8TAG9 804 aa10.83□□□□□ -0.68
LMO3-210ENST00000453727 RAPGEF4Q8WZA2 1011 aa10.83□□□□□ -0.68
LMO3-210ENST00000453727 RTF1Q92541 710 aaKnown RBP10.83□□□□□ -0.68
LMO3-210ENST00000453727 CRB1P82279 1406 aa10.83□□□□□ -0.68
LMO3-210ENST00000453727 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
LMO3-210ENST00000453727 HSPA1LP34931 641 aa10.83□□□□□ -0.68
LMO3-210ENST00000453727 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
LMO3-210ENST00000453727 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.83□□□□□ -0.68
LMO3-210ENST00000453727 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
LMO3-210ENST00000453727 MAP3K5Q99683 1374 aa10.82□□□□□ -0.68
LMO3-210ENST00000453727 LRRC37A3O60309 1634 aa10.82□□□□□ -0.68
LMO3-210ENST00000453727 BCL2L13Q9BXK5 485 aa10.82□□□□□ -0.68
LMO3-210ENST00000453727 HTATSF1O43719 755 aaKnown RBP10.82□□□□□ -0.68
LMO3-210ENST00000453727 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
LMO3-210ENST00000453727 PLEKHO1Q53GL0 409 aaPredicted RBP10.82□□□□□ -0.68
LMO3-210ENST00000453727 CRBNQ96SW2 442 aa10.81□□□□□ -0.68
LMO3-210ENST00000453727 MEGF6O75095 1541 aa10.8□□□□□ -0.68
LMO3-210ENST00000453727 CHL1O00533 1208 aa10.8□□□□□ -0.68
LMO3-210ENST00000453727 TATP17735 454 aaPredicted RBP10.8□□□□□ -0.68
LMO3-210ENST00000453727 TSPYL6Q8N831 410 aa10.8□□□□□ -0.68
LMO3-210ENST00000453727 IL17REQ8NFR9 667 aa10.8□□□□□ -0.68
LMO3-210ENST00000453727 CARD10Q9BWT7 1032 aa10.8□□□□□ -0.68
LMO3-210ENST00000453727 RRAGDQ9NQL2 400 aaPredicted RBP10.8□□□□□ -0.68
LMO3-210ENST00000453727 ZNF530Q6P9A1 599 aaPredicted RBP10.8□□□□□ -0.68
LMO3-210ENST00000453727 SSH1Q8WYL5 1049 aa10.8□□□□□ -0.68
LMO3-210ENST00000453727 ELL2O00472 640 aaPredicted RBP10.79□□□□□ -0.68
LMO3-210ENST00000453727 BACH2Q9BYV9 841 aa10.79□□□□□ -0.68
LMO3-210ENST00000453727 MIS18AQ9NYP9 233 aa10.79□□□□□ -0.68
LMO3-210ENST00000453727 VIRMAQ69YN4 1812 aaKnown RBP10.79□□□□□ -0.68
LMO3-210ENST00000453727 VAMP4O75379 141 aa10.79□□□□□ -0.68
LMO3-210ENST00000453727 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms