RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 FAM184AQ8NB25 1140 aa13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 ABCC3O15438 1527 aa13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 PHF14O94880 888 aa13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 CUL4AQ13619 759 aa13.64□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 DMTNQ08495 405 aa13.63□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 PTMAP06454 111 aaKnown RBP13.63□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 PIBF1Q8WXW3 757 aa13.63□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 PTPRMP28827 1452 aa13.62□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 LMOD3Q0VAK6 560 aa13.62□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 HDGFL2Q7Z4V5 671 aaPredicted RBP13.62□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 OSBPL3Q9H4L5 887 aa13.62□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 IL17RAQ96F46 866 aa13.61□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 CEP85Q6P2H3 762 aa13.6□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 SPTLC3Q9NUV7 552 aa13.6□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 ELL2O00472 640 aaPredicted RBP13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 NEK4P51957 841 aa13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 HAP1P54257 671 aaPredicted RBP13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 ANAPC15P60006 121 aa13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 RGS12O14924 1447 aa13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 GTPBP4Q9BZE4 634 aaKnown RBP13.59□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 SIGLEC1Q9BZZ2 1709 aa13.58□□□□□ -0.23
CHKB-CPT1B-202ENST00000453634 SAFB2Q14151 953 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 DNTTIP2Q5QJE6 756 aaKnown RBP13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 ARHGEF40Q8TER5 1519 aa13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 RIMS2Q9UQ26 1411 aa13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 IL13P35225 146 aa13.57□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 PODXL2Q9NZ53 605 aa13.57□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 KIF3AQ9Y496 699 aa13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 MAP2P11137 1827 aaKnown RBP13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 CDK12Q9NYV4 1490 aaPredicted RBP13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 HMOX1P09601 288 aa13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 MCCP23508 829 aa13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 MLH3Q9UHC1 1453 aa13.56□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 PTPRCP08575 1304 aa13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 FOXD4L5Q5VV16 416 aaPredicted RBP13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 FOXD4L4Q8WXT5 416 aaPredicted RBP13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 TUBGCP6Q96RT7 1819 aa13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 ATP7BP35670 1465 aa13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 PDE1AP54750 535 aa13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 EPB41L2O43491 1005 aaKnown RBP13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 HMMRO75330 724 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 KIF20AO95235 890 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 CCDC183Q5T5S1 534 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 ADCY5O95622 1261 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 ARID3AQ99856 593 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 STK26Q9P289 416 aa13.54□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 MSH6P52701 1360 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 KIAA0232Q92628 1395 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 GADD45BO75293 160 aaPredicted RBP13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 TPM3P06753 285 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 GGT6Q6P531 493 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 MX1P20591 662 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 ZHX1Q9UKY1 873 aaPredicted RBP13.52□□□□□ -0.24
CHKB-CPT1B-202ENST00000453634 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 KDM4AO75164 1064 aa13.52□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 ZNF830Q96NB3 372 aaPredicted RBP13.51□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 MEIS3Q99687 375 aa13.51□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 TTC12Q9H892 705 aaPredicted RBP13.51□□□□□ -0.25
CHKB-CPT1B-202ENST00000453634 POGZQ7Z3K3 1410 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms