RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 HOXC9P31274 260 aa21.23■□□□□ 0.99
VCX3B-204ENST00000453306 MTHFSP49914 203 aa21.23■□□□□ 0.99
VCX3B-204ENST00000453306 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
VCX3B-204ENST00000453306 IP6K1Q92551 441 aa21.23■□□□□ 0.99
VCX3B-204ENST00000453306 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
VCX3B-204ENST00000453306 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
VCX3B-204ENST00000453306 AMPHP49418 695 aa21.2■□□□□ 0.98
VCX3B-204ENST00000453306 RALBP1Q15311 655 aa21.2■□□□□ 0.98
VCX3B-204ENST00000453306 SLC15A2Q16348 729 aa21.2■□□□□ 0.98
VCX3B-204ENST00000453306 LTN1O94822 1766 aa21.2■□□□□ 0.98
VCX3B-204ENST00000453306 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
VCX3B-204ENST00000453306 ACSBG1Q96GR2 724 aa21.19■□□□□ 0.98
VCX3B-204ENST00000453306 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
VCX3B-204ENST00000453306 ZBTB7AO95365 584 aa21.18■□□□□ 0.98
VCX3B-204ENST00000453306 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
VCX3B-204ENST00000453306 CCDC184Q52MB2 194 aa21.17■□□□□ 0.98
VCX3B-204ENST00000453306 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
VCX3B-204ENST00000453306 FLT4P35916 1363 aa21.15■□□□□ 0.98
VCX3B-204ENST00000453306 LTV1Q96GA3 475 aaPredicted RBP21.15■□□□□ 0.98
VCX3B-204ENST00000453306 PDGFDQ9GZP0 370 aaPredicted RBP21.15■□□□□ 0.98
VCX3B-204ENST00000453306 MTFR1LQ9H019 292 aa21.15■□□□□ 0.98
VCX3B-204ENST00000453306 RTL1A6NKG5 1358 aa21.14■□□□□ 0.98
VCX3B-204ENST00000453306 INSRP06213 1382 aa21.14■□□□□ 0.98
VCX3B-204ENST00000453306 KIF24Q5T7B8 1368 aa21.14■□□□□ 0.98
VCX3B-204ENST00000453306 EIF4A2Q14240 407 aaKnown RBP21.14■□□□□ 0.97
VCX3B-204ENST00000453306 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
VCX3B-204ENST00000453306 MYBBP1AQ9BQG0 1328 aaKnown RBP21.12■□□□□ 0.97
VCX3B-204ENST00000453306 ANP32CO43423 234 aa21.12■□□□□ 0.97
VCX3B-204ENST00000453306 IL13P35225 146 aa21.12■□□□□ 0.97
VCX3B-204ENST00000453306 PTGER2P43116 358 aa21.12■□□□□ 0.97
VCX3B-204ENST00000453306 DDX54Q8TDD1 881 aaKnown RBP21.12■□□□□ 0.97
VCX3B-204ENST00000453306 COL3A1P02461 1466 aaPredicted RBP21.12■□□□□ 0.97
VCX3B-204ENST00000453306 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
VCX3B-204ENST00000453306 NBPF6Q5VWK0 638 aa21.11■□□□□ 0.97
VCX3B-204ENST00000453306 NBPF4Q96M43 638 aa21.11■□□□□ 0.97
VCX3B-204ENST00000453306 MAP2P11137 1827 aaKnown RBP21.09■□□□□ 0.97
VCX3B-204ENST00000453306 SLC27A3Q5K4L6 730 aa21.09■□□□□ 0.97
VCX3B-204ENST00000453306 EYA1Q99502 592 aa21.08■□□□□ 0.97
VCX3B-204ENST00000453306 BTAF1O14981 1849 aa21.07■□□□□ 0.96
VCX3B-204ENST00000453306 MIER1Q8N108 512 aa21.07■□□□□ 0.96
VCX3B-204ENST00000453306 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
VCX3B-204ENST00000453306 FHDC1Q9C0D6 1143 aaPredicted RBP21.06■□□□□ 0.96
VCX3B-204ENST00000453306 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
VCX3B-204ENST00000453306 SYTL4Q96C24 671 aaPredicted RBP21.05■□□□□ 0.96
VCX3B-204ENST00000453306 SYT17Q9BSW7 474 aa21.05■□□□□ 0.96
VCX3B-204ENST00000453306 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
VCX3B-204ENST00000453306 DIAPH1O60610 1272 aaKnown RBP21.04■□□□□ 0.96
VCX3B-204ENST00000453306 ARXQ96QS3 562 aa21.04■□□□□ 0.96
VCX3B-204ENST00000453306 SGIP1Q9BQI5 828 aa21.04■□□□□ 0.96
VCX3B-204ENST00000453306 LRRC4BQ9NT99 713 aa21.04■□□□□ 0.96
VCX3B-204ENST00000453306 AEBP1Q8IUX7 1158 aa21.03■□□□□ 0.96
VCX3B-204ENST00000453306 SLC16A10Q8TF71 515 aa21.03■□□□□ 0.96
VCX3B-204ENST00000453306 PRIM1P49642 420 aaKnown RBP21.02■□□□□ 0.96
VCX3B-204ENST00000453306 ZNF827Q17R98 1081 aa21.02■□□□□ 0.96
VCX3B-204ENST00000453306 IGSF1Q8N6C5 1336 aa21.02■□□□□ 0.95
VCX3B-204ENST00000453306 AKT1S1Q96B36 256 aa21.01■□□□□ 0.95
VCX3B-204ENST00000453306 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
VCX3B-204ENST00000453306 RAPGEF4Q8WZA2 1011 aa21■□□□□ 0.95
VCX3B-204ENST00000453306 CFAP53Q96M91 514 aa21■□□□□ 0.95
VCX3B-204ENST00000453306 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
VCX3B-204ENST00000453306 NCAPD2Q15021 1401 aa21■□□□□ 0.95
VCX3B-204ENST00000453306 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
VCX3B-204ENST00000453306 POLD1P28340 1107 aa20.99■□□□□ 0.95
VCX3B-204ENST00000453306 MAP3K5Q99683 1374 aa20.98■□□□□ 0.95
VCX3B-204ENST00000453306 HMOX1P09601 288 aa20.97■□□□□ 0.95
VCX3B-204ENST00000453306 TATP17735 454 aaPredicted RBP20.97■□□□□ 0.95
VCX3B-204ENST00000453306 MEGF6O75095 1541 aa20.97■□□□□ 0.95
VCX3B-204ENST00000453306 U2SURPO15042 1029 aaKnown RBP20.96■□□□□ 0.95
VCX3B-204ENST00000453306 SULT6B1Q6IMI4 303 aa20.96■□□□□ 0.95
VCX3B-204ENST00000453306 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
VCX3B-204ENST00000453306 CCNL1Q9UK58 526 aaPredicted RBP20.95■□□□□ 0.94
VCX3B-204ENST00000453306 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
VCX3B-204ENST00000453306 MRS2Q9HD23 443 aa20.94■□□□□ 0.94
VCX3B-204ENST00000453306 QSER1Q2KHR3 1735 aa20.94■□□□□ 0.94
VCX3B-204ENST00000453306 PNPLA7Q6ZV29 1317 aa20.94■□□□□ 0.94
VCX3B-204ENST00000453306 RGPD2P0DJD1 1756 aa20.94■□□□□ 0.94
VCX3B-204ENST00000453306 KDRP35968 1356 aa20.94■□□□□ 0.94
VCX3B-204ENST00000453306 U2AF1L5P0DN76 240 aaPredicted RBP20.93■□□□□ 0.94
VCX3B-204ENST00000453306 U2AF1Q01081 240 aaKnown RBP eCLIP20.93■□□□□ 0.94
VCX3B-204ENST00000453306 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
VCX3B-204ENST00000453306 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
VCX3B-204ENST00000453306 PCDH11XQ9BZA7 1347 aa20.93■□□□□ 0.94
VCX3B-204ENST00000453306 PCDH11YQ9BZA8 1340 aa20.93■□□□□ 0.94
VCX3B-204ENST00000453306 KCNQ4P56696 695 aa20.91■□□□□ 0.94
VCX3B-204ENST00000453306 GPR162Q16538 588 aa20.91■□□□□ 0.94
VCX3B-204ENST00000453306 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
VCX3B-204ENST00000453306 LY75O60449 1722 aa20.9■□□□□ 0.94
VCX3B-204ENST00000453306 SHANK3Q9BYB0 1731 aa20.9■□□□□ 0.94
VCX3B-204ENST00000453306 CCER2I3L3R5 266 aa20.9■□□□□ 0.94
VCX3B-204ENST00000453306 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
VCX3B-204ENST00000453306 MSH5O43196 834 aa20.89■□□□□ 0.93
VCX3B-204ENST00000453306 ZNF784Q8NCA9 323 aaPredicted RBP20.89■□□□□ 0.93
VCX3B-204ENST00000453306 PHACTR3Q96KR7 559 aa20.89■□□□□ 0.93
VCX3B-204ENST00000453306 PLEKHF1Q96S99 279 aa20.89■□□□□ 0.93
VCX3B-204ENST00000453306 PRKAR2BP31323 418 aa20.87■□□□□ 0.93
VCX3B-204ENST00000453306 FCHSD2O94868 740 aa20.86■□□□□ 0.93
VCX3B-204ENST00000453306 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
VCX3B-204ENST00000453306 UTRNP46939 3433 aa20.85■□□□□ 0.93
VCX3B-204ENST00000453306 MPRIPQ6WCQ1 1025 aa20.84■□□□□ 0.93
VCX3B-204ENST00000453306 SMARCC1Q92922 1105 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms