RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 POLMQ9NP87 494 aaPredicted RBP10.44□□□□□ -0.74
SCN3A-205ENST00000453007 ZNF777Q9ULD5 760 aaPredicted RBP10.44□□□□□ -0.74
SCN3A-205ENST00000453007 LILRA1O75019 489 aa10.43□□□□□ -0.74
SCN3A-205ENST00000453007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.43□□□□□ -0.74
SCN3A-205ENST00000453007 IRF7Q92985 503 aa10.43□□□□□ -0.74
SCN3A-205ENST00000453007 INSM2Q96T92 566 aaPredicted RBP10.43□□□□□ -0.74
SCN3A-205ENST00000453007 H3BM21 787 aa10.42□□□□□ -0.74
SCN3A-205ENST00000453007 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
SCN3A-205ENST00000453007 SCRIBQ14160 1630 aa10.41□□□□□ -0.74
SCN3A-205ENST00000453007 ABL2P42684 1182 aa10.41□□□□□ -0.74
SCN3A-205ENST00000453007 CTSOP43234 321 aaPredicted RBP10.41□□□□□ -0.74
SCN3A-205ENST00000453007 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
SCN3A-205ENST00000453007 FNBP4Q8N3X1 1017 aaPredicted RBP10.41□□□□□ -0.74
SCN3A-205ENST00000453007 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
SCN3A-205ENST00000453007 WWC1Q8IX03 1113 aa10.4□□□□□ -0.74
SCN3A-205ENST00000453007 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.74
SCN3A-205ENST00000453007 GDPD2Q9HCC8 539 aa10.4□□□□□ -0.74
SCN3A-205ENST00000453007 PCDHB11Q9Y5F2 797 aa10.4□□□□□ -0.74
SCN3A-205ENST00000453007 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
SCN3A-205ENST00000453007 PTGIRP43119 386 aa10.39□□□□□ -0.75
SCN3A-205ENST00000453007 EIF4G2P78344 907 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCN3A-205ENST00000453007 CC2D2BQ6DHV5 1058 aa10.38□□□□□ -0.75
SCN3A-205ENST00000453007 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
SCN3A-205ENST00000453007 ATP5J2-PTCD1G3V325 749 aa10.37□□□□□ -0.75
SCN3A-205ENST00000453007 WIPF1O43516 503 aa10.37□□□□□ -0.75
SCN3A-205ENST00000453007 ERBB4Q15303 1308 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 GMPRP36959 345 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 PTSQ03393 145 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 VAC14Q08AM6 782 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 IRF5Q13568 498 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 UNC13AQ9UPW8 1703 aa10.36□□□□□ -0.75
SCN3A-205ENST00000453007 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
SCN3A-205ENST00000453007 INSM1Q01101 510 aaPredicted RBP10.35□□□□□ -0.75
SCN3A-205ENST00000453007 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
SCN3A-205ENST00000453007 RNF217Q8TC41 542 aa10.35□□□□□ -0.75
SCN3A-205ENST00000453007 MEN1O00255 615 aa10.34□□□□□ -0.75
SCN3A-205ENST00000453007 SCTRP47872 440 aa10.34□□□□□ -0.75
SCN3A-205ENST00000453007 CYP2U1Q7Z449 544 aa10.33□□□□□ -0.76
SCN3A-205ENST00000453007 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
SCN3A-205ENST00000453007 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
SCN3A-205ENST00000453007 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
SCN3A-205ENST00000453007 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
SCN3A-205ENST00000453007 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
SCN3A-205ENST00000453007 MYCP01106 439 aaPredicted RBP10.31□□□□□ -0.76
SCN3A-205ENST00000453007 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
SCN3A-205ENST00000453007 A0A1W2PRU2 124 aa10.3□□□□□ -0.76
SCN3A-205ENST00000453007 LYSMD3Q7Z3D4 306 aa10.3□□□□□ -0.76
SCN3A-205ENST00000453007 PRICKLE2Q7Z3G6 844 aa10.3□□□□□ -0.76
SCN3A-205ENST00000453007 NLRP3Q96P20 1036 aa10.3□□□□□ -0.76
SCN3A-205ENST00000453007 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
SCN3A-205ENST00000453007 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
SCN3A-205ENST00000453007 RNF135Q8IUD6 432 aa10.29□□□□□ -0.76
SCN3A-205ENST00000453007 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
SCN3A-205ENST00000453007 OSBPL3Q9H4L5 887 aa10.29□□□□□ -0.76
SCN3A-205ENST00000453007 SLC35F4A4IF30 521 aa10.28□□□□□ -0.76
SCN3A-205ENST00000453007 RNF144AP50876 292 aaPredicted RBP10.28□□□□□ -0.76
SCN3A-205ENST00000453007 SEMA3FQ13275 785 aa10.28□□□□□ -0.76
SCN3A-205ENST00000453007 ARHGEF10LQ9HCE6 1279 aa10.28□□□□□ -0.76
SCN3A-205ENST00000453007 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
SCN3A-205ENST00000453007 ZBTB7CA1YPR0 619 aa10.27□□□□□ -0.77
SCN3A-205ENST00000453007 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
SCN3A-205ENST00000453007 SHROOM4Q9ULL8 1493 aa10.27□□□□□ -0.77
SCN3A-205ENST00000453007 RHOQP17081 205 aa10.26□□□□□ -0.77
SCN3A-205ENST00000453007 RAB6BQ9NRW1 208 aa10.26□□□□□ -0.77
SCN3A-205ENST00000453007 CDC14CA4D256 554 aa10.25□□□□□ -0.77
SCN3A-205ENST00000453007 ITGA6P23229 1130 aa10.25□□□□□ -0.77
SCN3A-205ENST00000453007 GPC1P35052 558 aa10.25□□□□□ -0.77
SCN3A-205ENST00000453007 OXLD1Q5BKU9 147 aa10.25□□□□□ -0.77
SCN3A-205ENST00000453007 SOX11P35716 441 aa10.24□□□□□ -0.77
SCN3A-205ENST00000453007 RANGAP1P46060 587 aaPredicted RBP10.24□□□□□ -0.77
SCN3A-205ENST00000453007 USP4Q13107 963 aa10.24□□□□□ -0.77
SCN3A-205ENST00000453007 CLN3Q13286 438 aa10.24□□□□□ -0.77
SCN3A-205ENST00000453007 TSGA10IPQ3SY00 556 aa10.24□□□□□ -0.77
SCN3A-205ENST00000453007 STK17AQ9UEE5 414 aa10.24□□□□□ -0.77
SCN3A-205ENST00000453007 GNRH1P01148 92 aa10.23□□□□□ -0.77
SCN3A-205ENST00000453007 PHTF2Q8N3S3 785 aa10.23□□□□□ -0.77
SCN3A-205ENST00000453007 ZSCAN1Q8NBB4 408 aa10.23□□□□□ -0.77
SCN3A-205ENST00000453007 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
SCN3A-205ENST00000453007 VWA5B2Q8N398 1253 aa10.22□□□□□ -0.77
SCN3A-205ENST00000453007 SV2AQ7L0J3 742 aa10.21□□□□□ -0.77
SCN3A-205ENST00000453007 CNKSR1Q969H4 720 aa10.21□□□□□ -0.77
SCN3A-205ENST00000453007 SIRT1Q96EB6 747 aa10.21□□□□□ -0.77
SCN3A-205ENST00000453007 FAM181BA6NEQ2 426 aa10.2□□□□□ -0.78
SCN3A-205ENST00000453007 POU4F2Q12837 409 aa10.2□□□□□ -0.78
SCN3A-205ENST00000453007 GPR161Q8N6U8 529 aaKnown RBP10.2□□□□□ -0.78
SCN3A-205ENST00000453007 NANOS1Q8WY41 292 aaKnown RBP10.2□□□□□ -0.78
SCN3A-205ENST00000453007 TRAIPQ9BWF2 469 aa10.2□□□□□ -0.78
SCN3A-205ENST00000453007 ESCO1Q5FWF5 840 aa10.19□□□□□ -0.78
SCN3A-205ENST00000453007 PLPP7Q8NBV4 271 aa10.19□□□□□ -0.78
SCN3A-205ENST00000453007 ESYT1Q9BSJ8 1104 aa10.19□□□□□ -0.78
SCN3A-205ENST00000453007 GRIP2Q9C0E4 1043 aa10.19□□□□□ -0.78
SCN3A-205ENST00000453007 IL2RAP01589 272 aa10.18□□□□□ -0.78
SCN3A-205ENST00000453007 GTF2E1P29083 439 aaPredicted RBP10.18□□□□□ -0.78
SCN3A-205ENST00000453007 MAP7D1Q3KQU3 841 aa10.18□□□□□ -0.78
SCN3A-205ENST00000453007 RIPOR1Q6ZS17 1223 aa10.18□□□□□ -0.78
SCN3A-205ENST00000453007 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
SCN3A-205ENST00000453007 CNTNAP3BQ96NU0 1288 aa10.18□□□□□ -0.78
SCN3A-205ENST00000453007 GAS2L1Q99501 681 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms