RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 ATF7IPQ6VMQ6 1270 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 CEP83Q9Y592 693 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 TPM1P09493 284 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 CCDC91Q7Z6B0 441 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 USP26Q9BXU7 913 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 ARGLU1Q9NWB6 273 aaPredicted RBP10.03□□□□□ -0.8
SMCO1-202ENST00000452776 ZDHHC9Q9Y397 364 aa10.03□□□□□ -0.8
SMCO1-202ENST00000452776 PLB1Q6P1J6 1458 aa10.02□□□□□ -0.81
SMCO1-202ENST00000452776 MAGI2Q86UL8 1455 aa10.02□□□□□ -0.81
SMCO1-202ENST00000452776 CCDC172P0C7W6 258 aa10.02□□□□□ -0.81
SMCO1-202ENST00000452776 ITPRIPQ8IWB1 547 aa10.02□□□□□ -0.81
SMCO1-202ENST00000452776 AK7Q96M32 723 aa10.02□□□□□ -0.81
SMCO1-202ENST00000452776 ATP6V1DQ9Y5K8 247 aa10.02□□□□□ -0.81
SMCO1-202ENST00000452776 WDR33Q9C0J8 1336 aaKnown RBP10.02□□□□□ -0.81
SMCO1-202ENST00000452776 DHX8Q14562 1220 aaKnown RBP10.01□□□□□ -0.81
SMCO1-202ENST00000452776 CEP135Q66GS9 1140 aa10.01□□□□□ -0.81
SMCO1-202ENST00000452776 CERS3Q8IU89 383 aa10.01□□□□□ -0.81
SMCO1-202ENST00000452776 BANK1Q8NDB2 785 aa10.01□□□□□ -0.81
SMCO1-202ENST00000452776 PSD3Q9NYI0 1048 aa10.01□□□□□ -0.81
SMCO1-202ENST00000452776 ITSN2Q9NZM3 1697 aa10.01□□□□□ -0.81
SMCO1-202ENST00000452776 IVLP07476 585 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 UBE2HP62256 183 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 GOLGA5Q8TBA6 731 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 LNPKQ9C0E8 428 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 PYCARDQ9ULZ3 195 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 ELP1O95163 1332 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 CFAP74Q9C0B2 1584 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 LOC102724159A0A0B4J2E5 919 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 SLU7O95391 586 aaKnown RBP10□□□□□ -0.81
SMCO1-202ENST00000452776 CAVIN2O95810 425 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 CUL4AQ13619 759 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 PWP2Q15269 919 aaKnown RBP10□□□□□ -0.81
SMCO1-202ENST00000452776 TPD52L1Q16890 204 aaPredicted RBP10□□□□□ -0.81
SMCO1-202ENST00000452776 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 DHX37Q8IY37 1157 aaKnown RBP10□□□□□ -0.81
SMCO1-202ENST00000452776 RBM28Q9NW13 759 aaKnown RBP10□□□□□ -0.81
SMCO1-202ENST00000452776 IFT57Q9NWB7 429 aa10□□□□□ -0.81
SMCO1-202ENST00000452776 MYO1CO00159 1063 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 CCDC192P0DO97 292 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
SMCO1-202ENST00000452776 C17orf53Q8N3J3 647 aaPredicted RBP9.99□□□□□ -0.81
SMCO1-202ENST00000452776 IQUBQ8NA54 791 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 KCNF1Q9H3M0 494 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
SMCO1-202ENST00000452776 JRKLQ9Y4A0 524 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 IL16Q14005 1332 aa9.99□□□□□ -0.81
SMCO1-202ENST00000452776 RBM6P78332 1123 aaKnown RBP9.98□□□□□ -0.81
SMCO1-202ENST00000452776 TRDNQ13061 729 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 FILIP1Q7Z7B0 1213 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 TCP11L2Q8N4U5 519 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 TACO1Q9BSH4 297 aaKnown RBP9.98□□□□□ -0.81
SMCO1-202ENST00000452776 CARD10Q9BWT7 1032 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 DONSONQ9NYP3 566 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
SMCO1-202ENST00000452776 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 SHANK2Q9UPX8 1470 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 ZBTB7CA1YPR0 619 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 TRIM27P14373 513 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 MAGEA9P43362 315 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 PTPN14Q15678 1187 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 CFAP65Q6ZU64 1925 aaKnown RBP9.98□□□□□ -0.81
SMCO1-202ENST00000452776 USP48Q86UV5 1035 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 CFAP53Q96M91 514 aa9.98□□□□□ -0.81
SMCO1-202ENST00000452776 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 MCCP23508 829 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 CDC25BP30305 580 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 SATB1Q01826 763 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 PKP1Q13835 747 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 TTC31Q49AM3 519 aaPredicted RBP9.97□□□□□ -0.81
SMCO1-202ENST00000452776 HSP90AB3PQ58FF7 597 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 KRBA2Q6ZNG9 492 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 SUGP1Q8IWZ8 645 aaKnown RBP9.97□□□□□ -0.81
SMCO1-202ENST00000452776 PPM1EQ8WY54 764 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 MED4Q9NPJ6 270 aa9.97□□□□□ -0.81
SMCO1-202ENST00000452776 ADGRL1O94910 1474 aa9.96□□□□□ -0.81
SMCO1-202ENST00000452776 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.81
SMCO1-202ENST00000452776 H2AFXP16104 143 aaPredicted RBP9.96□□□□□ -0.81
SMCO1-202ENST00000452776 ANAPC15P60006 121 aa9.96□□□□□ -0.81
SMCO1-202ENST00000452776 ZSCAN26Q16670 478 aa9.96□□□□□ -0.81
SMCO1-202ENST00000452776 ARHGAP45Q92619 1136 aa9.96□□□□□ -0.81
SMCO1-202ENST00000452776 EXOC4Q96A65 974 aa9.96□□□□□ -0.81
SMCO1-202ENST00000452776 CLTCL1P53675 1640 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 ABCC11Q96J66 1382 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 CCDC196A0A1B0GTZ2 297 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.82
SMCO1-202ENST00000452776 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 ATP2B1P20020 1258 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
SMCO1-202ENST00000452776 GRIPAP1Q4V328 841 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 FBXO38Q6PIJ6 1188 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 TMCO3Q6UWJ1 677 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 SYT10Q6XYQ8 523 aa9.96□□□□□ -0.82
SMCO1-202ENST00000452776 ZGPATQ8N5A5 531 aaKnown RBP9.96□□□□□ -0.82
SMCO1-202ENST00000452776 CCDC191Q8NCU4 936 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms