RNA–Protein interactions for RNA: ENST00000452413.1

KCTD3-203, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 3

Gene KCTD3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-203ENST00000452413 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
KCTD3-203ENST00000452413 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
KCTD3-203ENST00000452413 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
KCTD3-203ENST00000452413 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
KCTD3-203ENST00000452413 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
KCTD3-203ENST00000452413 ACSBG1Q96GR2 724 aa13.24□□□□□ -0.29
KCTD3-203ENST00000452413 MAP2P11137 1827 aaKnown RBP13.23□□□□□ -0.29
KCTD3-203ENST00000452413 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
KCTD3-203ENST00000452413 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
KCTD3-203ENST00000452413 HMOX1P09601 288 aa13.23□□□□□ -0.29
KCTD3-203ENST00000452413 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
KCTD3-203ENST00000452413 ANP32CO43423 234 aa13.22□□□□□ -0.29
KCTD3-203ENST00000452413 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
KCTD3-203ENST00000452413 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
KCTD3-203ENST00000452413 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
KCTD3-203ENST00000452413 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
KCTD3-203ENST00000452413 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
KCTD3-203ENST00000452413 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.29
KCTD3-203ENST00000452413 IL13P35225 146 aa13.21□□□□□ -0.29
KCTD3-203ENST00000452413 DEFB132Q7Z7B7 95 aa13.21□□□□□ -0.29
KCTD3-203ENST00000452413 PEAK1Q9H792 1746 aa13.21□□□□□ -0.3
KCTD3-203ENST00000452413 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
KCTD3-203ENST00000452413 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
KCTD3-203ENST00000452413 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
KCTD3-203ENST00000452413 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
KCTD3-203ENST00000452413 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
KCTD3-203ENST00000452413 DISP2A7MBM2 1401 aa13.2□□□□□ -0.3
KCTD3-203ENST00000452413 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
KCTD3-203ENST00000452413 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
KCTD3-203ENST00000452413 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
KCTD3-203ENST00000452413 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
KCTD3-203ENST00000452413 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
KCTD3-203ENST00000452413 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
KCTD3-203ENST00000452413 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
KCTD3-203ENST00000452413 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
KCTD3-203ENST00000452413 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
KCTD3-203ENST00000452413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■□□□□ 9.8
KCTD3-203ENST00000452413 MEGF6O75095 1541 aa13.18□□□□□ -0.3
KCTD3-203ENST00000452413 LRRC37A3O60309 1634 aa13.17□□□□□ -0.3
KCTD3-203ENST00000452413 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
KCTD3-203ENST00000452413 KCNQ2O43526 872 aa13.16□□□□□ -0.3
KCTD3-203ENST00000452413 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
KCTD3-203ENST00000452413 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
KCTD3-203ENST00000452413 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
KCTD3-203ENST00000452413 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
KCTD3-203ENST00000452413 PHKG2P15735 406 aa13.14□□□□□ -0.31
KCTD3-203ENST00000452413 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
KCTD3-203ENST00000452413 CABP4P57796 275 aa13.14□□□□□ -0.31
KCTD3-203ENST00000452413 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
KCTD3-203ENST00000452413 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
KCTD3-203ENST00000452413 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
KCTD3-203ENST00000452413 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
KCTD3-203ENST00000452413 CYP27B1O15528 508 aa13.13□□□□□ -0.31
KCTD3-203ENST00000452413 HMGB2P26583 209 aaKnown RBP13.13□□□□□ -0.31
KCTD3-203ENST00000452413 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
KCTD3-203ENST00000452413 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
KCTD3-203ENST00000452413 FCHSD2O94868 740 aa13.12□□□□□ -0.31
KCTD3-203ENST00000452413 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
KCTD3-203ENST00000452413 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
KCTD3-203ENST00000452413 PLSCR1O15162 318 aa13.11□□□□□ -0.31
KCTD3-203ENST00000452413 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
KCTD3-203ENST00000452413 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
KCTD3-203ENST00000452413 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
KCTD3-203ENST00000452413 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
KCTD3-203ENST00000452413 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
KCTD3-203ENST00000452413 PTF1AQ7RTS3 328 aa13.1□□□□□ -0.31
KCTD3-203ENST00000452413 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
KCTD3-203ENST00000452413 BCL9O00512 1426 aa13.1□□□□□ -0.31
KCTD3-203ENST00000452413 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
KCTD3-203ENST00000452413 TEFQ10587 303 aa13.09□□□□□ -0.31
KCTD3-203ENST00000452413 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
KCTD3-203ENST00000452413 KDRP35968 1356 aa13.08□□□□□ -0.31
KCTD3-203ENST00000452413 PLEKHG2Q9H7P9 1386 aa13.08□□□□□ -0.31
KCTD3-203ENST00000452413 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.32
KCTD3-203ENST00000452413 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
KCTD3-203ENST00000452413 MRS2Q9HD23 443 aa13.08□□□□□ -0.32
KCTD3-203ENST00000452413 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
KCTD3-203ENST00000452413 NCAPD2Q15021 1401 aa13.07□□□□□ -0.32
KCTD3-203ENST00000452413 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
KCTD3-203ENST00000452413 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
KCTD3-203ENST00000452413 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
KCTD3-203ENST00000452413 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
KCTD3-203ENST00000452413 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
KCTD3-203ENST00000452413 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
KCTD3-203ENST00000452413 PIGBQ92521 554 aa13.06□□□□□ -0.32
KCTD3-203ENST00000452413 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
KCTD3-203ENST00000452413 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
KCTD3-203ENST00000452413 MAP3K5Q99683 1374 aa13.05□□□□□ -0.32
KCTD3-203ENST00000452413 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
KCTD3-203ENST00000452413 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
KCTD3-203ENST00000452413 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
KCTD3-203ENST00000452413 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
KCTD3-203ENST00000452413 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
KCTD3-203ENST00000452413 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
KCTD3-203ENST00000452413 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
KCTD3-203ENST00000452413 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
KCTD3-203ENST00000452413 KCNQ4P56696 695 aa13.03□□□□□ -0.32
KCTD3-203ENST00000452413 LMOD3Q0VAK6 560 aa13.03□□□□□ -0.32
KCTD3-203ENST00000452413 SLC52A2Q9HAB3 445 aa13.03□□□□□ -0.32
KCTD3-203ENST00000452413 LGR6Q9HBX8 967 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms